Metam
ORF

Logo

ORF Browser

Selected

filters

Database

H.sapiens

ORFs

No result matching criteria

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

2464 11 + 6608440 - 6608493 1 54

ATG ...

MCP ...

2467 11 + 6608455 - 6608493 1 39

ATG ...

MPV ...

2469 1 + 29033179 - 29033208 1 30

TTG ...

LAQ ...

2472 11 + 6608939 - 6608971 1 33

CTG ...

LEG ...

2474 11 - 6610945 - 6610974 1 30

CTG ...

LPS ...

2477 11 - 6610922 - 6610981 1 60

TTG ...

LTP ...

2479 1 + 29039319 - 29039360 1 42

GTG ...

VAG ...

2481 11 - 6611384 - 6611440 1 57

GTG ...

VTG ...

2483 11 - 6611406 - 6611480 1 75

CTG ...

LTV ...

2485 11 - 6611634 - 6611756 1 123

CTG ...

LPS ...

2487 11 - 6611634 - 6611813 1 180

GTG ...

VSA ...

2489 1 + 29053146 - 29053193 1 48

CTG ...

LHL ...

2491 1 + 29053152 - 29053193 1 42

CTG ...

LPL ...

2493 11 - 6616298 - 6616477 1 180

CTG ...

LQW ...

2495 11 - 6682118 - 6682192 1 75

TTG ...

LRQ ...

2498 11 - 6682118 - 6682201 1 84

CTG ...

LQG ...

2500 11 - 6682118 - 6682204 1 87

CTG ...

LLQ ...

2502 11 - 6682118 - 6682243 1 126

CTG ...

LPR ...

2504 11 - 6682118 - 6682249 1 132

CTG ...

LPL ...

2506 11 - 6682118 - 6682282 1 165

GTG ...

VIE ...

2508 11 - 6682118 - 6682303 1 186

TTG ...

LDR ...

2510 11 - 6682118 - 6682324 1 207

CTG ...

LQI ...

2512 11 - 6682118 - 6682369 1 252

CTG ...

LAP ...

2514 11 - 6682118 - 6682381 1 264

CTG ...

LFQ ...

2516 11 - 6682118 - 6682393 1 276

TTG ...

LIP ...

2518 1 - 1787318 - 1787377 1 60

CTG ...

LWR ...

2521 1 + 29065058 - 29065162 1 105

CTG ...

LYQ ...

2523 1 + 29097892 - 29097939 1 48

TTG ...

LST ...

2525 11 - 9288462 - 9288524 1 63

TTG ...

LLF ...

2528 1 - 1787318 - 1787386 1 69

ATG ...

MAW ...

2530 11 + 9408586 - 9408630 1 45

TTG ...

LYS ...

2533 11 + 9409982 - 9410029 1 48

CTG ...

LDC ...

2535 11 + 9417103 - 9417147 1 45

ATG ...

MDR ...

2538 11 + 9420424 - 9420489 1 66

TTG ...

LKK ...

2541 11 + 9420433 - 9420489 1 57

ATG ...

MID ...

2543 1 + 29109337 - 29109378 1 42

CTG ...

LTT ...

2545 11 + 9420616 - 9420672 1 57

ATG ...

MEA ...

2547 1 + 29109349 - 29109378 1 30

GTG ...

VET ...

2549 1 - 1787318 - 1787392 1 75

CTG ...

LTM ...

2551 11 + 9436296 - 9436325 1 30

ATG ...

MQS ...

2553 11 + 9437812 - 9437889 1 78

GTG ...

VNF ...

2555 11 + 9437828 - 9437863 1 36

GTG ...

VSA ...

2557 11 + 9437839 - 9437889 1 51

TTG ...

LQL ...

2559 11 + 9437845 - 9437889 1 45

TTG ...

LQL ...

2561 11 + 9438098 - 9438127 1 30

GTG ...

VCS ...

2563 11 + 9438163 - 9438207 1 45

CTG ...

LDR ...

2565 11 + 9442103 - 9442132 1 30

GTG ...

VVS ...

2567 11 + 9442132 - 9442164 1 33

ATG ...

MKN ...

2569 11 + 9573987 - 9574034 1 48

CTG ...

LHL ...

2572 11 + 9575990 - 9576097 1 108

GTG ...

VRQ ...

Previous 23 Next

Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS