Metam
ORF

Logo

ORF Browser

Selected

filters

Database

H.sapiens

ORFs

No result matching criteria

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

2357 11 + 4109654 - 4109707 1 54

CTG ...

LLL ...

2359 11 + 4109666 - 4109707 1 42

ATG ...

MTE ...

2361 11 + 4111923 - 4112066 1 144

TTG ...

LMR ...

2363 11 + 4111936 - 4112079 1 144

CTG ...

LLG ...

2365 11 + 4112000 - 4112062 1 63

GTG ...

VVY ...

2368 11 + 4118343 - 4118375 1 33

ATG ...

MTA ...

2371 11 + 4119878 - 4119946 1 69

CTG ...

LRV ...

2374 11 + 4119906 - 4119941 1 36

ATG ...

MWI ...

2376 11 + 4119908 - 4119946 1 39

GTG ...

VDQ ...

2378 11 + 4121585 - 4121656 1 72

ATG ...

MIY ...

2380 11 + 4121628 - 4121801 1 174

CTG ...

LEP ...

2382 11 + 4121723 - 4121761 1 39

TTG ...

LDS ...

2385 11 + 4126699 - 4126839 1 141

TTG ...

LAS ...

2387 11 + 4126708 - 4126839 1 132

CTG ...

LAL ...

2389 11 + 4126714 - 4126839 1 126

CTG ...

LNM ...

2391 11 + 4127159 - 4127260 1 102

TTG ...

LKL ...

2393 11 + 4127174 - 4127260 1 87

ATG ...

MVL ...

2395 11 + 4127177 - 4127260 1 84

GTG ...

VLW ...

2397 11 + 4127195 - 4127260 1 66

GTG ...

VTL ...

2399 11 + 4127201 - 4127260 1 60

TTG ...

LPR ...

2401 11 + 4129084 - 4129158 1 75

ATG ...

MIC ...

2403 11 + 4129091 - 4129168 1 78

GTG ...

VEC ...

2405 11 + 4129096 - 4129158 1 63

ATG ...

MLL ...

2407 11 + 4132312 - 4132425 1 114

TTG ...

LPR ...

2409 11 + 4132336 - 4132425 1 90

CTG ...

LLR ...

2411 11 + 4132347 - 4132469 1 123

CTG ...

LGN ...

2413 11 + 4132357 - 4132425 1 69

ATG ...

MSP ...

2415 11 + 4132366 - 4132425 1 60

TTG ...

LNL ...

2417 11 + 4133581 - 4133664 1 84

TTG ...

LKD ...

2419 11 + 4133640 - 4133669 1 30

ATG ...

MQW ...

2421 11 + 4135106 - 4135345 1 240

CTG ...

LKQ ...

2423 11 + 4135127 - 4135345 1 219

GTG ...

VWE ...

2425 11 + 4135129 - 4135170 1 42

GTG ...

VGN ...

2427 11 + 4135167 - 4135205 1 39

CTG ...

LRE ...

2429 11 + 4135176 - 4135205 1 30

GTG ...

VLS ...

2431 11 + 4138198 - 4138383 1 186

TTG ...

LKT ...

2433 11 + 4138336 - 4138383 1 48

GTG ...

VCS ...

2435 11 + 4138345 - 4138383 1 39

TTG ...

LEN ...

2437 11 - 6403507 - 6403539 1 33

CTG ...

LDR ...

2440 11 - 6478824 - 6478886 1 63

TTG ...

LSC ...

2443 11 - 6478896 - 6478931 1 36

TTG ...

LVE ...

2445 11 - 6478883 - 6478960 1 78

GTG ...

VHK ...

2447 11 + 6481810 - 6481848 1 39

CTG ...

LCA ...

2450 11 + 6481812 - 6481868 1 57

GTG ...

VCP ...

2452 11 + 6482054 - 6482221 1 168

CTG ...

LHS ...

2454 11 + 6482062 - 6482190 1 129

CTG ...

LCW ...

2456 11 + 6482075 - 6482221 1 147

CTG ...

LIH ...

2458 11 + 6482111 - 6482221 1 111

GTG ...

VQL ...

2460 11 + 6482129 - 6482221 1 93

CTG ...

LVQ ...

2462 11 + 6482171 - 6482221 1 51

GTG ...

VPG ...

Previous 22 Next

Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS