Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

2248 11 - 2971444 - 2971512 1 69

ATG ...

MLN ...

2250 11 - 2972098 - 2972133 1 36

ATG ...

MQR ...

2252 11 - 2972098 - 2972151 1 54

ATG ...

MTW ...

2254 11 - 2972098 - 2972163 1 66

ATG ...

MKR ...

2256 11 - 2972160 - 2972189 1 30

ATG ...

MCS ...

2258 11 - 3020216 - 3020278 1 63

TTG ...

LPY ...

2261 11 - 3039805 - 3039897 1 93

TTG ...

LKD ...

2264 11 - 3039805 - 3039900 1 96

GTG ...

VLK ...

2266 11 - 3039805 - 3039909 1 105

TTG ...

LRR ...

2268 11 - 3040892 - 3040954 1 63

GTG ...

VTW ...

2271 11 - 3040892 - 3040981 1 90

GTG ...

VFI ...

2273 1 + 28742407 - 28742529 1 123

ATG ...

MHI ...

2276 1 + 28742416 - 28742529 1 114

CTG ...

LPC ...

2278 1 + 28742461 - 28742529 1 69

TTG ...

LAS ...

2280 1 + 28742482 - 28742529 1 48

GTG ...

VKL ...

2282 1 + 28742488 - 28742529 1 42

CTG ...

LLG ...

2284 11 - 3686154 - 3686189 1 36

ATG ...

MIS ...

2287 1 + 28742575 - 28742604 1 30

ATG ...

MQC ...

2289 1 + 28742620 - 28742751 1 132

TTG ...

LVS ...

2291 1 + 28742629 - 28742751 1 123

ATG ...

MVL ...

2293 1 + 28742650 - 28742751 1 102

GTG ...

VGL ...

2295 1 + 28742656 - 28742751 1 96

TTG ...

LTS ...

2297 1 + 28742710 - 28742751 1 42

CTG ...

LDI ...

2299 11 - 3702718 - 3702825 1 108

ATG ...

MSY ...

2301 11 - 3719416 - 3719451 1 36

ATG ...

MIT ...

2303 1 + 28743121 - 28743159 1 39

TTG ...

LQK ...

2305 11 - 3731413 - 3731442 1 30

ATG ...

MGW ...

2307 11 - 3731413 - 3731445 1 33

TTG ...

LMG ...

2309 1 + 28743340 - 28743384 1 45

GTG ...

VAV ...

2311 1 + 28743346 - 28743384 1 39

GTG ...

VGS ...

2313 11 - 3762898 - 3762939 1 42

TTG ...

LGR ...

2315 11 - 3773688 - 3773732 1 45

CTG ...

LVQ ...

2317 1 + 28743649 - 28743690 1 42

GTG ...

VST ...

2319 1 + 28743661 - 28743690 1 30

GTG ...

VDT ...

2321 1 + 28743764 - 28743793 1 30

GTG ...

VDF ...

2323 11 - 3827781 - 3827822 1 42

CTG ...

LMC ...

2326 11 - 3827781 - 3827870 1 90

ATG ...

MRT ...

2328 11 + 4101993 - 4102085 1 93

ATG ...

MAA ...

2331 11 + 4102017 - 4102085 1 69

TTG ...

LTK ...

2333 11 + 4102053 - 4102085 1 33

ATG ...

MDS ...

2335 11 + 4106076 - 4106246 1 171

TTG ...

LYS ...

2338 11 + 4106097 - 4106246 1 150

GTG ...

VEL ...

2340 11 + 4106112 - 4106246 1 135

TTG ...

LAA ...

2342 11 + 4106136 - 4106246 1 111

TTG ...

LTT ...

2344 11 + 4106152 - 4106238 1 87

CTG ...

LTM ...

2346 11 + 4106158 - 4106238 1 81

ATG ...

MLS ...

2348 11 + 4106166 - 4106246 1 81

CTG ...

LAA ...

2350 11 + 4106182 - 4106238 1 57

CTG ...

LSL ...

2352 11 + 4106193 - 4106246 1 54

TTG ...

LHK ...

2354 11 + 4107437 - 4107583 1 147

GTG ...

VME ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS