Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

2136 11 - 1753895 - 1754113 1 219

CTG ...

LCK ...

2138 11 - 1753895 - 1754119 1 225

CTG ...

LTL ...

2140 11 - 1753895 - 1754131 1 237

GTG ...

VAS ...

2142 11 - 1753895 - 1754137 1 243

GTG ...

VEV ...

2144 11 - 1757373 - 1757441 1 69

ATG ...

MAS ...

2147 11 - 1757373 - 1757492 1 120

TTG ...

LGR ...

2149 11 - 1757373 - 1757516 1 144

GTG ...

VSK ...

2151 11 - 1757373 - 1757528 1 156

CTG ...

LPW ...

2153 11 - 1759512 - 1759541 1 30

CTG ...

LQT ...

2156 11 - 1759512 - 1759559 1 48

GTG ...

VGP ...

2158 11 - 1759512 - 1759598 1 87

GTG ...

VLH ...

2160 11 + 1950906 - 1951025 1 120

CTG ...

LYR ...

2163 11 + 1950915 - 1951025 1 111

CTG ...

LGG ...

2166 11 + 1950936 - 1951025 1 90

GTG ...

VFR ...

2168 11 + 1950963 - 1951025 1 63

CTG ...

LVR ...

2170 11 + 1950966 - 1951025 1 60

GTG ...

VRP ...

2172 11 + 1950978 - 1951025 1 48

GTG ...

VAQ ...

2174 11 + 1956219 - 1956314 1 96

TTG ...

LQL ...

2177 11 + 1956231 - 1956314 1 84

CTG ...

LEP ...

2179 11 + 1956240 - 1956314 1 75

TTG ...

LFS ...

2181 11 + 1956286 - 1956420 1 135

CTG ...

LFP ...

2183 11 + 2390412 - 2390588 1 177

CTG ...

LAG ...

2186 11 + 2390424 - 2390588 1 165

GTG ...

VIL ...

2188 11 + 2390430 - 2390588 1 159

CTG ...

LGV ...

2190 11 + 2390434 - 2390526 1 93

GTG ...

VWP ...

2192 11 + 2390436 - 2390588 1 153

GTG ...

VAL ...

2194 11 + 2390442 - 2390588 1 147

CTG ...

LWL ...

2196 11 + 2390455 - 2390526 1 72

ATG ...

MTR ...

2199 11 + 2394137 - 2394196 1 60

TTG ...

LAS ...

2202 11 + 2394958 - 2395050 1 93

CTG ...

LPG ...

2205 11 + 2394997 - 2395050 1 54

TTG ...

LPV ...

2207 11 + 2395003 - 2395050 1 48

GTG ...

VRW ...

2209 11 + 2395428 - 2395592 1 165

GTG ...

VKQ ...

2211 11 + 2395441 - 2395503 1 63

ATG ...

MTR ...

2213 11 + 2395471 - 2395503 1 33

ATG ...

MMT ...

2215 11 + 2395474 - 2395503 1 30

ATG ...

MTP ...

2217 11 + 2395874 - 2395999 1 126

CTG ...

LLW ...

2219 11 + 2395877 - 2395999 1 123

CTG ...

LWL ...

2221 11 + 2396608 - 2396709 1 102

GTG ...

VPG ...

2224 11 + 2396650 - 2396709 1 60

ATG ...

MTS ...

2226 11 + 2396819 - 2396866 1 48

CTG ...

LSM ...

2228 11 + 2396828 - 2396866 1 39

GTG ...

VLC ...

2230 11 + 2396831 - 2396866 1 36

CTG ...

LCC ...

2232 11 - 2954541 - 2954570 1 30

CTG ...

LCC ...

2235 11 - 2958402 - 2958464 1 63

CTG ...

LLE ...

2237 11 - 2959852 - 2959887 1 36

TTG ...

LNP ...

2239 11 - 2969813 - 2969851 1 39

CTG ...

LVY ...

2241 11 - 2969817 - 2969885 1 69

CTG ...

LKS ...

2243 1 + 28697036 - 28697095 1 60

GTG ...

VPG ...

2246 11 - 2971444 - 2971509 1 66

TTG ...

LNQ ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS