Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

2023 11 + 821760 - 821795 1 36

ATG ...

MSM ...

2025 11 + 821962 - 822027 1 66

ATG ...

MSA ...

2028 11 + 822403 - 822702 1 300

GTG ...

VDG ...

2031 1 + 28537835 - 28537915 1 81

GTG ...

VFS ...

2033 1 + 28537845 - 28537889 1 45

CTG ...

LGH ...

2035 11 + 824286 - 824360 1 75

CTG ...

LNA ...

2038 11 + 824304 - 824360 1 57

CTG ...

LSP ...

2040 11 + 824315 - 824440 1 126

TTG ...

LLE ...

2043 11 + 824318 - 824440 1 123

CTG ...

LEW ...

2045 11 + 824327 - 824440 1 114

CTG ...

LPD ...

2047 11 + 824390 - 824440 1 51

CTG ...

LVM ...

2049 11 + 824393 - 824440 1 48

GTG ...

VMR ...

2051 11 + 824569 - 824862 1 294

GTG ...

VPL ...

2053 11 + 824575 - 824862 1 288

CTG ...

LSC ...

2055 11 + 824602 - 824862 1 261

CTG ...

LPG ...

2057 11 + 824632 - 824862 1 231

CTG ...

LGD ...

2059 1 + 28537886 - 28537915 1 30

ATG ...

MRT ...

2061 11 + 836255 - 836386 1 132

CTG ...

LAW ...

2064 11 + 836264 - 836386 1 123

CTG ...

LSW ...

2066 11 + 836303 - 836386 1 84

GTG ...

VTT ...

2068 11 + 836812 - 836847 1 36

CTG ...

LVS ...

2070 11 + 837465 - 837506 1 42

CTG ...

LLW ...

2072 11 + 837468 - 837506 1 39

CTG ...

LWQ ...

2074 1 + 28537937 - 28537984 1 48

GTG ...

VWS ...

2076 11 - 840340 - 840444 1 105

CTG ...

LPP ...

2079 11 - 840340 - 840447 1 108

CTG ...

LLP ...

2081 11 - 842385 - 842480 1 96

GTG ...

VAR ...

2083 11 - 842385 - 842498 1 114

CTG ...

LYA ...

2085 1 + 28561361 - 28561402 1 42

CTG ...

LNY ...

2088 11 - 902252 - 902296 1 45

TTG ...

LGA ...

2091 1 + 28564722 - 28564838 1 117

GTG ...

VGD ...

2093 11 - 902252 - 902311 1 60

ATG ...

MSP ...

2095 11 - 902252 - 902320 1 69

ATG ...

MAT ...

2097 11 - 902958 - 902993 1 36

TTG ...

LLG ...

2099 1 + 28564731 - 28564838 1 108

CTG ...

LTP ...

2101 1 + 28564743 - 28564838 1 96

GTG ...

VDD ...

2103 11 + 972181 - 972240 1 60

CTG ...

LHR ...

2106 1 + 28564758 - 28564838 1 81

CTG ...

LYE ...

2108 1 + 28564806 - 28564838 1 33

GTG ...

VVL ...

2110 11 + 988605 - 988667 1 63

GTG ...

VRP ...

2112 11 + 992525 - 992572 1 48

CTG ...

LRS ...

2114 1 - 951996 - 952106 1 111

GTG ...

VHC ...

2116 11 - 1277039 - 1277110 1 72

GTG ...

VLE ...

2119 11 - 1277039 - 1277122 1 84

GTG ...

VIR ...

2121 11 - 1288716 - 1288751 1 36

TTG ...

LPG ...

2124 11 - 1753549 - 1753596 1 48

CTG ...

LDP ...

2127 11 - 1753549 - 1753647 1 99

CTG ...

LPE ...

2129 11 - 1754005 - 1754049 1 45

ATG ...

MRC ...

2132 11 - 1754005 - 1754088 1 84

TTG ...

LWT ...

2134 11 - 1754005 - 1754097 1 93

GTG ...

VRP ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS