Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

1684 10 + 72230410 - 72233116 2 147

GTG ...

VAS ...

1686 10 + 90896320 - 90905338 3 207

CTG ...

LFG ...

1689 10 + 90896317 - 90905338 3 210

TTG ...

LLF ...

1691 10 + 90896356 - 90905338 3 171

GTG ...

VST ...

1693 10 + 90896317 - 90900679 2 186

TTG ...

LLF ...

1696 10 + 90896356 - 90900679 2 147

GTG ...

VST ...

1698 10 + 90896320 - 90900679 2 183

CTG ...

LFG ...

1700 10 - 16593394 - 16695099 2 180

GTG ...

VTP ...

1703 10 - 16593394 - 16752554 3 252

CTG ...

LPP ...

1706 10 + 58277278 - 58282919 2 66

TTG ...

LGD ...

1709 10 - 101786451 - 101787487 2 261

CTG ...

LPE ...

1712 10 - 101786451 - 101787376 2 150

CTG ...

LKA ...

1714 10 - 101786451 - 101787514 2 288

TTG ...

LSF ...

1716 10 - 101786451 - 101787454 2 228

CTG ...

LIK ...

1718 10 - 101786451 - 101787412 2 186

GTG ...

VAK ...

1720 10 - 101786451 - 101787385 2 159

CTG ...

LSS ...

1722 10 + 110894463 - 110898088 3 261

TTG ...

LDL ...

1725 10 - 75234073 - 75234696 2 240

GTG ...

VDA ...

1727 10 - 75234073 - 75234735 2 279

CTG ...

LAA ...

1729 10 - 75234073 - 75234705 2 249

GTG ...

VAV ...

1731 10 - 75234073 - 75234651 2 195

CTG ...

LQL ...

1733 10 - 75234073 - 75234699 2 243

GTG ...

VVD ...

1735 10 - 75234073 - 75234941 3 291

CTG ...

LDE ...

1737 10 - 75234073 - 75234738 2 282

CTG ...

LLA ...

1739 10 - 73250852 - 73251886 2 264

CTG ...

LGS ...

1742 10 - 73250852 - 73251868 2 246

TTG ...

LPN ...

1744 10 - 73250852 - 73251766 2 144

CTG ...

LGL ...

1746 10 - 92454444 - 92456425 3 231

TTG ...

LAV ...

1749 10 - 70883950 - 70885163 2 111

GTG ...

VYN ...

1752 10 - 70883950 - 70885190 2 138

CTG ...

LDH ...

1754 10 - 70883950 - 70885211 2 159

GTG ...

VAL ...

1756 10 - 70883950 - 70885205 2 153

CTG ...

LQA ...

1758 10 + 7802308 - 7806980 3 222

CTG ...

LQN ...

1760 10 + 7802356 - 7806980 3 174

CTG ...

LKE ...

1762 10 + 7802332 - 7806980 3 198

CTG ...

LAN ...

1764 10 + 7802305 - 7806980 3 225

GTG ...

VLQ ...

1766 10 + 7788159 - 7796156 2 141

ATG ...

MRA ...

1769 10 + 7788177 - 7796156 2 123

CTG ...

LTD ...

1771 10 + 7788261 - 7796156 2 39

ATG ...

MDS ...

1773 10 + 7788243 - 7796156 2 57

CTG ...

LDL ...

1775 10 + 7788243 - 7796606 3 57

CTG ...

LDL ...

1778 10 + 7788261 - 7796606 3 39

ATG ...

MDS ...

1780 10 + 7788177 - 7796606 3 123

CTG ...

LTD ...

1782 10 + 7788243 - 7806974 3 57

CTG ...

LDL ...

1785 10 + 7788261 - 7806974 3 39

ATG ...

MDS ...

1787 10 - 101781736 - 101782285 2 147

GTG ...

VRI ...

1790 10 - 101781736 - 101782345 2 207

CTG ...

LDD ...

1792 10 + 58394364 - 58395074 2 198

CTG ...

LKT ...

1795 10 + 58385514 - 58386303 2 219

TTG ...

LGS ...

1797 10 + 79347702 - 79349762 3 171

GTG ...

VDA ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS