Metam
ORF

Logo

ORF Browser

Selected

filters

Database

H.sapiens

ORFs

No result matching criteria

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

1799 10 + 79347732 - 79349762 3 141

GTG ...

VVL ...

1801 10 + 79349076 - 79349762 2 129

CTG ...

LKA ...

1803 10 + 79347690 - 79349762 3 183

GTG ...

VYL ...

1805 10 + 79347735 - 79349762 3 138

GTG ...

VLE ...

1807 10 + 79347696 - 79349762 3 177

CTG ...

LDV ...

1809 10 - 99397547 - 99402712 2 273

GTG ...

VKT ...

1812 10 - 99397547 - 99402688 2 249

CTG ...

LTM ...

1814 10 - 56358429 - 56358866 3 225

GTG ...

VFQ ...

1816 10 - 56358418 - 56358567 2 54

GTG ...

VSF ...

1818 10 - 56358418 - 56358678 2 165

TTG ...

LFP ...

1820 10 + 101600752 - 101608870 3 249

GTG ...

VKS ...

1823 10 + 101600764 - 101608870 3 237

CTG ...

LGA ...

1825 10 + 101600827 - 101608870 3 174

CTG ...

LGP ...

1827 10 - 119575665 - 119576717 2 234

GTG ...

VYG ...

1829 10 - 56358418 - 56358681 2 168

CTG ...

LLF ...

1831 1 + 28509190 - 28509279 1 90

ATG ...

MHI ...

1834 10 - 56358429 - 56358845 3 204

CTG ...

LKQ ...

1836 10 - 119831474 - 119832082 2 198

GTG ...

VEM ...

1838 10 - 3138031 - 3138323 2 183

TTG ...

LYG ...

1841 10 - 56358429 - 56359706 5 279

TTG ...

LSS ...

1844 1 - 951996 - 952091 1 96

CTG ...

LWC ...

1846 10 - 102481878 - 102482123 2 144

TTG ...

LER ...

1849 10 - 102481878 - 102482111 2 132

GTG ...

VKA ...

1851 10 + 12249614 - 12250337 2 132

GTG ...

VTV ...

1854 10 + 12249638 - 12250337 2 108

TTG ...

LSY ...

1856 10 - 12167702 - 12172846 4 255

TTG ...

LSN ...

1859 10 - 12167702 - 12170735 2 129

CTG ...

LLQ ...

1861 10 - 12167702 - 12172822 4 231

GTG ...

VTV ...

1863 10 - 12167702 - 12170732 2 126

CTG ...

LQR ...

1865 10 - 12167702 - 12170765 2 159

GTG ...

VEV ...

1867 1 + 28532190 - 28532354 1 165

ATG ...

MMR ...

1870 1 + 28532193 - 28532354 1 162

ATG ...

MRV ...

1872 1 + 28532199 - 28532354 1 156

GTG ...

VPW ...

1874 1 + 28532244 - 28532354 1 111

CTG ...

LGK ...

1876 11 + 212446 - 212517 1 72

GTG ...

VLS ...

1879 11 + 212449 - 212517 1 69

CTG ...

LSV ...

1881 11 + 212455 - 212517 1 63

GTG ...

VLT ...

1883 11 + 212458 - 212517 1 60

CTG ...

LTE ...

1885 1 + 28532316 - 28532354 1 39

ATG ...

MMA ...

1887 1 + 28532319 - 28532354 1 36

ATG ...

MAV ...

1889 1 + 28532325 - 28532354 1 30

GTG ...

VSS ...

1891 11 + 214282 - 214350 1 69

CTG ...

LQD ...

1894 11 + 239027 - 239080 1 54

TTG ...

LIL ...

1897 11 + 239033 - 239080 1 48

TTG ...

LCR ...

1899 11 + 247404 - 247457 1 54

ATG ...

MLC ...

1901 1 + 28535102 - 28535134 1 33

CTG ...

LCR ...

1903 11 + 486984 - 487094 1 111

CTG ...

LGV ...

1906 11 + 486996 - 487094 1 99

CTG ...

LPE ...

1908 1 + 28535285 - 28535332 1 48

CTG ...

LMV ...

1910 1 + 28535288 - 28535332 1 45

ATG ...

MVT ...

Previous 17 Next

Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS