Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

1570 10 + 92645608 - 92648218 2 42

ATG ...

MKG ...

1572 10 + 92648394 - 92649889 2 96

TTG ...

LLS ...

1574 10 - 94337856 - 94338660 2 72

CTG ...

LST ...

1577 10 - 94337856 - 94338666 2 78

ATG ...

MSL ...

1579 10 - 94337856 - 94338675 2 87

CTG ...

LNW ...

1581 10 - 94337856 - 94338690 2 102

GTG ...

VEF ...

1583 10 - 94337856 - 94338705 2 117

GTG ...

VNL ...

1585 10 - 94337856 - 94338711 2 123

TTG ...

LTV ...

1587 1 + 28271777 - 28271875 1 99

CTG ...

LTT ...

1590 10 - 95238098 - 95238592 2 39

GTG ...

VTN ...

1593 1 + 28271828 - 28271875 1 48

ATG ...

MVP ...

1595 10 - 95247362 - 95263894 2 36

CTG ...

LPA ...

1597 10 - 95247362 - 95263897 2 39

CTG ...

LLP ...

1599 10 - 95247362 - 95263915 2 57

ATG ...

MPW ...

1601 10 - 95247362 - 95263939 2 81

CTG ...

LKI ...

1603 10 - 95247362 - 95263954 2 96

CTG ...

LAS ...

1605 10 - 95247362 - 95264005 2 147

CTG ...

LPP ...

1607 10 - 95247362 - 95264029 2 171

GTG ...

VPC ...

1609 10 - 95625419 - 95626740 2 75

CTG ...

LEE ...

1612 10 - 95643093 - 95653355 2 180

GTG ...

VGS ...

1614 10 - 95643098 - 95653411 4 231

CTG ...

LQI ...

1616 10 - 96544022 - 96547937 2 228

GTG ...

VNG ...

1619 10 - 96551399 - 96552965 2 51

ATG ...

MLG ...

1622 1 + 28272747 - 28272782 1 36

GTG ...

VNR ...

1624 10 - 97468374 - 97468995 2 63

TTG ...

LTP ...

1627 10 - 97468374 - 97469007 2 75

CTG ...

LRT ...

1629 10 - 97468374 - 97469010 2 78

ATG ...

MLR ...

1631 10 - 97468374 - 97469013 2 81

CTG ...

LML ...

1633 1 + 28274082 - 28274162 1 81

TTG ...

LWK ...

1635 10 + 988462 - 996114 3 246

GTG ...

VHT ...

1638 10 + 988510 - 996114 3 198

GTG ...

VVP ...

1640 10 + 988513 - 996114 3 195

GTG ...

VPS ...

1642 10 + 992507 - 996114 2 162

TTG ...

LSK ...

1644 1 + 28274106 - 28274162 1 57

ATG ...

MRT ...

1646 10 - 99403614 - 99403825 2 123

CTG ...

LET ...

1649 10 - 99403614 - 99403852 2 150

TTG ...

LTQ ...

1651 10 - 99420609 - 99430454 2 204

GTG ...

VGA ...

1654 10 - 99420609 - 99430460 2 210

CTG ...

LGV ...

1656 10 - 99420609 - 99430517 2 267

CTG ...

LVF ...

1658 10 + 996157 - 997241 2 120

CTG ...

LQT ...

1660 10 - 99721038 - 99724002 2 78

GTG ...

VPA ...

1663 1 + 28274833 - 28274877 1 45

CTG ...

LGR ...

1665 10 + 999022 - 1000683 2 81

ATG ...

MSS ...

1667 10 + 999034 - 1000683 2 69

ATG ...

MRS ...

1669 10 + 999058 - 1000683 2 45

TTG ...

LLG ...

1671 10 + 999061 - 1000683 2 42

TTG ...

LGT ...

1673 10 - 101781736 - 101782306 2 168

CTG ...

LKS ...

1676 10 + 58277278 - 58287650 2 135

TTG ...

LGD ...

1679 10 + 58277293 - 58287650 2 120

GTG ...

VYC ...

1681 10 + 72230431 - 72233116 2 126

GTG ...

VKH ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS