Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

1459 10 + 84143995 - 84144876 2 114

TTG ...

LIR ...

1462 10 + 84144016 - 84144876 2 93

TTG ...

LLL ...

1464 10 + 84144019 - 84144876 2 90

TTG ...

LLE ...

1466 10 + 84144022 - 84144876 2 87

CTG ...

LEG ...

1468 10 + 84144031 - 84144876 2 78

CTG ...

LLL ...

1470 10 + 84144034 - 84144876 2 75

CTG ...

LLV ...

1472 10 + 84144037 - 84144876 2 72

TTG ...

LVL ...

1474 10 + 84144043 - 84144876 2 66

TTG ...

LEH ...

1476 10 + 84144061 - 84144876 2 48

ATG ...

MAW ...

1478 10 + 84144079 - 84144876 2 30

ATG ...

MRL ...

1480 10 + 84148822 - 84150178 2 141

TTG ...

LVA ...

1482 10 + 84150829 - 84152271 2 60

GTG ...

VQK ...

1484 1 + 28236144 - 28236434 1 291

TTG ...

LLR ...

1487 1 + 28236147 - 28236434 1 288

CTG ...

LRQ ...

1489 10 - 87051849 - 87053349 2 30

CTG ...

LPG ...

1492 10 - 87051849 - 87053376 2 57

CTG ...

LAW ...

1494 10 - 87051849 - 87053397 2 78

CTG ...

LRK ...

1496 10 - 87051849 - 87053403 2 84

GTG ...

VHL ...

1498 10 - 87051849 - 87057725 3 120

TTG ...

LYP ...

1500 1 + 28236213 - 28236434 1 222

GTG ...

VAW ...

1503 1 + 28236225 - 28236434 1 210

GTG ...

VGR ...

1505 10 - 87771035 - 87776349 2 36

ATG ...

MDW ...

1508 10 - 89215037 - 89215981 2 69

TTG ...

LTG ...

1511 10 - 89215037 - 89222539 3 126

CTG ...

LCK ...

1513 10 - 89215037 - 89222548 3 135

CTG ...

LEL ...

1515 10 - 89215037 - 89222551 3 138

CTG ...

LLE ...

1517 10 + 90885833 - 90900608 3 225

GTG ...

VDL ...

1520 10 + 90885899 - 90900608 3 159

GTG ...

VAI ...

1522 1 + 28237815 - 28237868 1 54

CTG ...

LSH ...

1524 1 + 28237856 - 28237978 1 123

CTG ...

LAA ...

1526 1 + 28237865 - 28237978 1 114

TTG ...

LKK ...

1528 1 + 28237878 - 28237964 1 87

ATG ...

MKK ...

1530 1 + 28237911 - 28237964 1 54

TTG ...

LSV ...

1532 1 + 28237919 - 28237978 1 60

CTG ...

LQK ...

1534 1 + 28237932 - 28237964 1 33

TTG ...

LSA ...

1536 10 + 92291424 - 92311190 3 162

GTG ...

VLL ...

1539 10 + 92291430 - 92311190 3 156

TTG ...

LSL ...

1541 10 + 92291436 - 92311190 3 150

CTG ...

LGL ...

1543 10 + 92291442 - 92311190 3 144

CTG ...

LAL ...

1545 10 + 92291448 - 92311190 3 138

TTG ...

LSG ...

1547 10 + 92291475 - 92311190 3 111

GTG ...

VRR ...

1549 10 + 92349481 - 92349852 2 234

CTG ...

LWR ...

1552 10 - 92478772 - 92479408 2 150

GTG ...

VDP ...

1555 10 + 92606702 - 92607203 2 60

TTG ...

LHY ...

1558 10 + 92607161 - 92609038 2 96

ATG ...

MAK ...

1560 10 + 92607170 - 92609038 2 87

CTG ...

LAL ...

1562 10 + 92607176 - 92609038 2 81

CTG ...

LEK ...

1564 10 + 92607200 - 92609038 2 57

GTG ...

VKG ...

1566 10 + 92607215 - 92609038 2 42

ATG ...

MKS ...

1568 10 + 92630354 - 92632606 2 132

CTG ...

LPA ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS