Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

1337 10 - 72368341 - 72375803 2 36

TTG ...

LHS ...

1340 10 - 72368341 - 72375812 2 45

ATG ...

MWC ...

1342 10 - 72368341 - 72375815 2 48

GTG ...

VMW ...

1344 10 - 73376095 - 73377456 2 135

CTG ...

LGL ...

1347 10 - 73376199 - 73378951 2 60

ATG ...

MTP ...

1350 10 - 73376199 - 73378960 2 69

CTG ...

LAQ ...

1352 10 - 73376199 - 73378963 2 72

GTG ...

VLA ...

1354 10 - 73383318 - 73383605 2 57

ATG ...

MPG ...

1356 10 - 73388402 - 73398234 4 243

CTG ...

LEA ...

1359 10 - 73388402 - 73398252 4 261

CTG ...

LEV ...

1361 10 - 73388402 - 73398258 4 267

CTG ...

LRL ...

1363 10 - 73388402 - 73398270 4 279

CTG ...

LEA ...

1365 10 - 73388402 - 73398285 4 294

GTG ...

VAT ...

1367 10 + 73769147 - 73769523 2 183

CTG ...

LQC ...

1370 10 + 74074857 - 74082469 2 63

GTG ...

VCY ...

1373 10 + 74074881 - 74082469 2 39

ATG ...

MKM ...

1375 1 - 28038866 - 28038898 1 33

ATG ...

MHR ...

1377 1 - 951996 - 952076 1 81

CTG ...

LST ...

1380 10 - 74129241 - 74129938 2 33

CTG ...

LEC ...

1383 10 - 74129241 - 74129980 2 75

TTG ...

LQK ...

1385 10 + 74224555 - 74314683 2 54

ATG ...

MTK ...

1388 10 + 74394265 - 74398481 2 60

ATG ...

MSS ...

1391 10 + 74394286 - 74398481 2 39

GTG ...

VLH ...

1393 10 + 74394289 - 74398481 2 36

CTG ...

LHA ...

1395 10 + 74525379 - 74527774 2 63

TTG ...

LMK ...

1398 10 - 75234073 - 75234642 2 186

CTG ...

LRP ...

1401 10 - 75234073 - 75234645 2 189

CTG ...

LLR ...

1403 10 - 75235369 - 75235702 2 87

CTG ...

LLP ...

1406 10 - 75400203 - 75401169 2 237

CTG ...

LAT ...

1409 10 - 7763779 - 7766102 2 63

TTG ...

LKR ...

1412 10 + 7788199 - 7797134 2 153

GTG ...

VAT ...

1415 10 + 7788235 - 7797134 2 117

CTG ...

LSA ...

1417 1 - 28201248 - 28201286 1 39

CTG ...

LRP ...

1420 10 + 7788250 - 7797134 2 102

TTG ...

LQP ...

1422 1 - 28201248 - 28201352 1 105

GTG ...

VDS ...

1424 10 - 77983975 - 77984266 2 30

ATG ...

MTT ...

1427 10 + 79347585 - 79349762 3 288

CTG ...

LLS ...

1430 10 + 79347606 - 79349762 3 267

GTG ...

VPL ...

1432 10 + 79347612 - 79349762 3 261

CTG ...

LRL ...

1434 10 + 79347738 - 79349762 3 135

CTG ...

LEL ...

1436 10 + 79349076 - 79351609 3 243

CTG ...

LKA ...

1439 1 - 28210004 - 28210066 1 63

CTG ...

LWT ...

1441 10 + 79349679 - 79351609 2 198

CTG ...

LCT ...

1443 10 + 79349730 - 79351609 2 147

GTG ...

VIP ...

1445 1 - 28209958 - 28210080 1 123

ATG ...

MFC ...

1447 10 + 79352390 - 79353787 2 84

CTG ...

LVG ...

1450 10 - 80166191 - 80166978 2 96

ATG ...

MSR ...

1453 10 - 80167235 - 80169003 2 114

CTG ...

LGL ...

1455 10 - 80167235 - 80169048 2 159

CTG ...

LGS ...

1457 10 - 80167235 - 80169072 2 183

CTG ...

LVS ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS