Metam
ORF

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H.sapiens

ORFs

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MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

Chromosome

The name of the chromosome (or scaffold) the ORF is located on.

Strand

The strand of the ORF (+ or -)

Start - stop
positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the ORF (in a 1-based system).

Exons

The number of exons constituting the ORF

ORF length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

1226 10 + 68974734 - 68977590 2 72

ATG ...

MPS ...

1228 10 + 69133022 - 69155815 2 30

ATG ...

MTE ...

1231 10 + 69168597 - 69171162 2 42

TTG ...

LMR ...

1233 10 + 69168600 - 69171162 2 39

ATG ...

MRK ...

1235 1 - 27978370 - 27978405 1 36

ATG ...

MDE ...

1238 1 - 27978370 - 27978411 1 42

TTG ...

LEM ...

1240 10 - 70161055 - 70161639 2 36

ATG ...

MFQ ...

1243 10 - 70161055 - 70161657 2 54

ATG ...

MTD ...

1245 10 - 70161055 - 70161693 2 90

ATG ...

MQA ...

1247 10 - 70161596 - 70161873 2 159

GTG ...

VLQ ...

1250 10 - 70209662 - 70213480 2 42

ATG ...

MQP ...

1253 10 - 70209662 - 70213483 2 45

CTG ...

LMQ ...

1255 10 - 70209662 - 70213489 2 51

ATG ...

MIL ...

1257 10 - 70209662 - 70213495 2 57

ATG ...

MWM ...

1259 10 - 70209662 - 70213504 2 66

TTG ...

LPL ...

1261 10 - 70209662 - 70213534 2 96

TTG ...

LTK ...

1263 10 - 70217910 - 70218798 2 57

TTG ...

LKY ...

1266 10 - 70218799 - 70230366 2 45

ATG ...

MIF ...

1268 10 - 70218799 - 70230396 2 75

ATG ...

MRK ...

1270 10 - 70218799 - 70230405 3 84

TTG ...

LQK ...

1272 10 + 70404503 - 70419932 2 63

TTG ...

LHH ...

1275 10 - 70884033 - 70885177 2 42

CTG ...

LNG ...

1278 10 - 70884033 - 70885198 2 63

CTG ...

LRN ...

1280 10 - 70885217 - 70885838 2 57

ATG ...

MPS ...

1282 10 - 70885217 - 70885841 2 60

GTG ...

VMP ...

1284 10 - 70885217 - 70885856 2 75

ATG ...

MSW ...

1286 10 - 71819075 - 71819508 2 81

TTG ...

LRK ...

1289 10 - 71819075 - 71819514 2 87

CTG ...

LLL ...

1291 10 - 71819075 - 71819598 2 171

GTG ...

VAS ...

1293 10 - 71819717 - 71820244 2 189

CTG ...

LRK ...

1295 10 - 71819717 - 71820259 2 204

TTG ...

LTT ...

1297 10 - 71820278 - 71821904 2 87

CTG ...

LPW ...

1299 10 - 71820278 - 71821913 2 96

ATG ...

MSS ...

1301 10 - 71821962 - 71823907 3 66

TTG ...

LFN ...

1304 10 - 71825848 - 71828045 2 78

GTG ...

VTA ...

1306 10 - 71825848 - 71828060 2 93

ATG ...

MSR ...

1308 10 - 71825848 - 71828081 2 114

TTG ...

LSR ...

1310 10 - 71825848 - 71828102 2 135

CTG ...

LYG ...

1312 10 - 71825848 - 71828105 2 138

CTG ...

LLY ...

1314 10 - 71825848 - 71828117 2 150

CTG ...

LTS ...

1316 10 - 71828118 - 71828959 2 123

CTG ...

LRW ...

1318 10 - 71829077 - 71831157 2 33

CTG ...

LSS ...

1320 10 - 71819717 - 71831241 2 78

TTG ...

LFT ...

1323 10 - 71819717 - 71831265 3 102

GTG ...

VSS ...

1325 10 - 71819717 - 71831268 3 105

CTG ...

LVS ...

1327 10 - 71819717 - 71831274 3 111

CTG ...

LTL ...

1329 10 - 71819717 - 71831280 3 117

GTG ...

VIL ...

1331 1 - 27997321 - 27997353 1 33

ATG ...

MWL ...

1333 1 - 27997321 - 27997362 1 42

ATG ...

MWK ...

1335 1 - 27997321 - 27997374 1 54

GTG ...

VTR ...

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Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unitary_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

B_cell

BJ

Blood

Brain

Brain_tumor

Breast

Flp-In_T-REx-293

guo_2014

HAP1

HCT116

HEK293

HEK293T

HeLa

hES

HFF

Jurkat

LCL

loayza_puch_2016

MDA-MB-231

MM1S

Monocyte

NCCIT

RPE-1

Skeletal_muscle

THP-1

U2OS