Metam
ORF

Logo

Gene

Gene

ID CARD

ID

NCBI:74838

Aliases

5730450D16Rik
6330400I15, ASTBDN, ENSMUSG00000063273
MGI:1922088, mNAT1, Naa15
Narg1, NCBI:74838, OFF:Naa15
Tbdn-1

Chromosome

3

Transcripts

173 ORFs
9 known transcripts
292 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

502738 ENSMUST00000192523 Naa15-204 processed_transcript
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

816650 39

TTG ...

LLL ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF
51885 63

ATG ...

MKS ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Spleen_B_cell
52752 99

CTG ...

LGI ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF
1013717 30

CTG ...

LAK ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
505710 30

GTG ...

VLQ ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Spleen_B_cell
506071 51

CTG ...

LHR ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Spleen_B_cell
53561 81

CTG ...

LPG ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF
536770 102

ATG ...

MER ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, R1E
506470 141

GTG ...

VNS ...

Ribo-seq
GTG

3 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, R1E, Spleen_B_cell
506869 66

ATG ...

MAF ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Spleen_B_cell
504680 102

TTG ...

LNC ...

Ribo-seq
TTG

6 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Brain, MEF,
R1E, Spleen_B_cell
504426 123

TTG ...

LQL ...

Ribo-seq
TTG

6 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Brain, Liver,
MEF, R1E, Spleen_B_cell
502737 54

TTG ...

LLN ...

Ribo-seq
TTG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF, Spleen_B_cell
817861 30

CTG ...

LPL ...

Ribo-seq
CTG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF, R1E
1882418 147

TTG ...

LEE ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    ncRNA
    sORF
R1E
507401 72

CTG ...

LEH ...

Ribo-seq
CTG

5 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Liver, MEF,
R1E, Spleen_B_cell
819752 198

TTG ...

LAF ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    ncRNA
    sORF
B_cell
1682942 33

GTG ...

VIF ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
505400 186

GTG ...

VDL ...

Ribo-seq
GTG

3 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Liver, R1E
139073 45

CTG ...

LST ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, R1E, Spleen_B_cell
504885 66

CTG ...

LLT ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, R1E, Spleen_B_cell
1171665 33

TTG ...

LRS ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
820121 30

CTG ...

LFG ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF, R1E
507143 63

CTG ...

LTF ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, R1E, Spleen_B_cell
747525 45

TTG ...

LGL ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF, R1E
507073 39

GTG ...

VCS ...

Ribo-seq
GTG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF, R1E,
Spleen_B_cell
820548 48

GTG ...

VIN ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
B_cell
504325 108

TTG ...

LED ...

Ribo-seq
TTG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Liver, R1E,
Spleen_B_cell
506942 66

TTG ...

LVR ...

Ribo-seq
TTG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Brain, R1E,
Spleen_B_cell
817707 66

CTG ...

LIK ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, R1E
504986 30

TTG ...

LVM ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Spleen_B_cell
504795 57

ATG ...

MRK ...

Ribo-seq
ATG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF, R1E,
Spleen_B_cell
504876 69

ATG ...

MLL ...

Ribo-seq
ATG

3 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, R1E, Spleen_B_cell
506661 147

GTG ...

VDY ...

Ribo-seq
GTG

5 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Liver, MEF,
R1E, Spleen_B_cell
818147 78

TTG ...

LLL ...

Ribo-seq
TTG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF, R1E
502908 39

GTG ...

VKH ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Spleen_B_cell
816906 36

CTG ...

LLK ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF
506708 165

CTG ...

LIK ...

Ribo-seq
CTG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF, R1E,
Spleen_B_cell
503789 126

CTG ...

LNE ...

Ribo-seq
CTG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Liver, R1E,
Spleen_B_cell
818273 180

TTG ...

LCR ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    ncRNA
    sORF
B_cell
504177 45

TTG ...

LAC ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Spleen_B_cell
506882 93

TTG ...

LGK ...

Ribo-seq
TTG

5 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Brain, MEF,
R1E, Spleen_B_cell
506912 126

CTG ...

LDT ...

Ribo-seq
CTG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Liver, R1E,
Spleen_B_cell
505526 54

GTG ...

VVP ...

Ribo-seq
GTG

5 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF, R1E,
Spleen_B_cell
818657 186

GTG ...

VSL ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
B_cell
504419 51

TTG ...

LRN ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Spleen_B_cell
820260 102

TTG ...

LIT ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF
817066 117

TTG ...

LYL ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF
503883 42

TTG ...

LVK ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Spleen_B_cell
506321 33

ATG ...

MKP ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Spleen_B_cell
506718 126

CTG ...

LLQ ...

Ribo-seq
CTG

5 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Brain, MEF,
R1E, Spleen_B_cell
54156 102

ATG ...

MLG ...

Ribo-seq
ATG

3 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, R1E, Spleen_B_cell
52906 30

GTG ...

VHD ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    ncRNA
    sORF
MEF, Spleen_B_cell
503795 117

TTG ...

LCR ...

Ribo-seq
TTG

6 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Brain, Liver,
MEF, R1E, Spleen_B_cell
504256 66

ATG ...

MKP ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Spleen_B_cell
1881742 132

TTG ...

LIS ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    ncRNA
    sORF
R1E
17094 45

ATG ...

MDW ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Spleen_B_cell
751885 63

ATG ...

MYF ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, R1E
817780 123

TTG ...

LFL ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    ncRNA
    sORF
B_cell
819857 33

TTG ...

LGP ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, R1E
505085 42

GTG ...

VPR ...

Ribo-seq
GTG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF, R1E,
Spleen_B_cell
752052 30

CTG ...

LKI ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, R1E
820139 165

TTG ...

LLQ ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    ncRNA
    sORF
B_cell
749900 105

ATG ...

MME ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, R1E
502783 150

ATG ...

MNI ...

Ribo-seq
ATG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF, R1E,
Spleen_B_cell
537983 33

ATG ...

MTS ...

Ribo-seq
ATG

3 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF, R1E
506049 60

GTG ...

VYV ...

Ribo-seq
GTG

5 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF, R1E,
Spleen_B_cell
816916 69

CTG ...

LQI ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
B_cell
818834 108

CTG ...

LEY ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Liver, R1E
140028 42

ATG ...

MIK ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    ncRNA
    sORF
MEF, R1E
819694 105

TTG ...

LKL ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF
136691 33

TTG ...

LVS ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    ncRNA
    sORF
MEF, R1E
504842 117

CTG ...

LKW ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Spleen_B_cell
819749 75

TTG ...

LLN ...

Ribo-seq
TTG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF, R1E
817923 150

TTG ...

LAQ ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Liver, R1E
1647851 84

CTG ...

LTD ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
506351 57

ATG ...

MKC ...

Ribo-seq
ATG

5 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, MEF, R1E,
Spleen_B_cell
504496 72

ATG ...

MFM ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Spleen_B_cell
506804 36

GTG ...

VCK ...

Ribo-seq
GTG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Liver, R1E,
Spleen_B_cell
504467 81

GTG ...

VAI ...

Ribo-seq
GTG

6 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Liver, MEF,
R1E, Spleen_B_cell
413611 30

ATG ...

MNI ...

Ribo-seq
ATG

moderate

2 sORFs_org_Mouse
    ncRNA
    sORF
MEF
819538 33

TTG ...

LKK ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    ncRNA
    sORF
B_cell
138765 186

CTG ...

LRN ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Liver, R1E
819826 114

TTG ...

LFF ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    ncRNA
    sORF
B_cell
506877 120

TTG ...

LML ...

Ribo-seq
TTG

4 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Liver, R1E,
Spleen_B_cell
818303 30

TTG ...

LLA ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Liver, R1E
503386 36

ATG ...

MMK ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Spleen_B_cell
1056529 ENSMUST00000195430 Naa15-209 retained_intron
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

504842 117

CTG ...

LKW ...

Ribo-seq
CTG

moderate

7 sORFs_org_Mouse
    Intronic
    sORF
E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5
506869 66

ATG ...

MAF ...

Ribo-seq
ATG

moderate

4 sORFs_org_Mouse
    Intronic
    sORF
MEF, NSC, v6-5
819826 114

TTG ...

LFF ...

Ribo-seq
TTG

moderate

5 sORFs_org_Mouse
    Intronic
    sORF
E14, MEF, NSC,
R1E, v6-5
816916 69

CTG ...

LQI ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    Intronic
    sORF
Neutrophil
820139 165

TTG ...

LLQ ...

Ribo-seq
TTG

weak

6 sORFs_org_Mouse
    Intronic
    sORF
E14, Liver, MEF,
Neutrophil, R1E, v6-5
504496 72

ATG ...

MFM ...

Ribo-seq
ATG

moderate

5 sORFs_org_Mouse
    Intronic
    sORF
MEF, NSC, R1E,
v6-5
506321 33

ATG ...

MKP ...

Ribo-seq
ATG

moderate

4 sORFs_org_Mouse
    Intronic
    sORF
E14, MEF, NSC,
v6-5
503386 36

ATG ...

MMK ...

Ribo-seq
ATG

moderate

4 sORFs_org_Mouse
    Intronic
    sORF
E14, MEF, NSC,
v6-5
17094 45

ATG ...

MDW ...

Ribo-seq
ATG

strong

8 sORFs_org_Mouse
    Intronic
    sORF
E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5
504986 30

TTG ...

LVM ...

Ribo-seq
TTG

strong

3 sORFs_org_Mouse
    Intronic
    sORF
E14, NSC, v6-5
504177 45

TTG ...

LAC ...

Ribo-seq
TTG

strong

5 sORFs_org_Mouse
    Intronic
    sORF
E14, MEF, NSC,
v6-5
505710 30

GTG ...

VLQ ...

Ribo-seq
GTG

weak

7 sORFs_org_Mouse
    Intronic
    sORF
E14, Liver, MEF,
NSC, R1E, v6-5
506071 51

CTG ...

LHR ...

Ribo-seq
CTG

moderate

5 sORFs_org_Mouse
    Intronic
    sORF
E14, MEF, NSC,
R1E, v6-5
17095 ENSMUST00000193266 Naa15-205 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

819857 33

TTG ...

LGP ...

Ribo-seq
TTG

strong

5 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14, MEF, NSC,
v6-5
543793 45

TTG ...

LGL ...

Ribo-seq
TTG

5 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
52218 36

TTG ...

LIL ...

Ribo-seq
TTG

weak

6 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, BMDC, E14,
MEF, NSC, v6-5
52588 42

GTG ...

VKV ...

Ribo-seq
GTG

weak

7 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, Brain, E14,
MEF, NSC, v6-5
1218249 33

AGG ...

RCW ...

Ribo-seq
AGG

weak

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
E14
536770 102

ATG ...

MER ...

Ribo-seq
ATG

strong

6 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
505246 42

ATG ...

MLW ...

Ribo-seq
ATG

weak

7 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, BMDC, E14,
MEF, NSC, v6-5
1648869 42

TTG ...

LQS ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Alternative
    sORF
    Upstream
MEF
144861 75

TTG ...

LMD ...

Ribo-seq
TTG

4 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, Brain, NSC,
v6-5
507143 63

CTG ...

LTF ...

Ribo-seq
CTG

weak

6 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
136691 33

TTG ...

LVS ...

Ribo-seq
TTG

strong

5 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
BMDC, Brain, E14,
NSC, v6-5
541017 81

TTG ...

LEA ...

Ribo-seq
TTG

4 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, E14, NSC,
v6-5
508656 48

GTG ...

VLA ...

Ribo-seq
GTG

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14, MEF, NSC,
v6-5
541773 93

ATG ...

MTK ...

Ribo-seq
ATG

6 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
1222755 144

AGG ...

RGK ...

Ribo-seq
AGG

strong

1 sORFs_org_Mouse
    sORF
    Upstream
E14
504256 66

ATG ...

MKP ...

Ribo-seq
ATG

weak

6 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
1221491 39

ATT ...

ITL ...

Ribo-seq
ATT

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14
819538 33

TTG ...

LKK ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
NSC
1221975 36

ATC ...

IHC ...

Ribo-seq
ATC

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14
507279 54

GTG ...

VSG ...

Ribo-seq
GTG

moderate

4 sORFs_org_Mouse
    Alternative
    sORF
    Upstream
3T3, MEF, Neutrophil
504872 213

TTG ...

LAA ...

Ribo-seq
TTG

strong

3 sORFs_org_Mouse
    Alternative
    sORF
    Upstream
B_cell, E14, Spleen_B_cell
506351 57

ATG ...

MKC ...

Ribo-seq
ATG

weak

7 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
55534 48

CTG ...

LKK ...

Ribo-seq
CTG

5 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
Neutrophil, v6-5
140028 42

ATG ...

MIK ...

Ribo-seq
ATG

moderate

6 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Brain, E14, MEF,
NSC, v6-5
893357 48

ATC ...

IHF ...

Ribo-seq
ATC

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14
1224127 39

AGG ...

RLK ...

Ribo-seq
AGG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
E14
816650 39

TTG ...

LLL ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
NSC
17094 45

ATG ...

MDW ...

Ribo-seq
ATG

strong

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Skin_tumor
1219681 30

ATA ...

ILQ ...

Ribo-seq
ATA

weak

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
E14
55472 144

ATG ...

MQK ...

Ribo-seq
ATG

6 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
505526 54

GTG ...

VVP ...

Ribo-seq
GTG

moderate

6 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
136857 36

TTG ...

LMD ...

Ribo-seq
TTG

4 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, Brain, E14,
v6-5
506549 249

GTG ...

VTR ...

Ribo-seq
GTG

moderate

2 sORFs_org_Mouse
    Alternative
    sORF
    Upstream
B_cell, Spleen_B_cell
54156 102

ATG ...

MLG ...

Ribo-seq
ATG

moderate

5 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
Neutrophil, v6-5
52752 99

CTG ...

LGI ...

Ribo-seq
CTG

strong

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14, v6-5
1223450 45

AAG ...

KKC ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14
52906 30

GTG ...

VHD ...

Ribo-seq
GTG

6 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14, MEF, NSC,
v6-5
54264 39

TTG ...

LPL ...

Ribo-seq
TTG

5 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
E14, MEF, NSC,
v6-5
17105 45

CTG ...

LQK ...

Ribo-seq
CTG

moderate

8 sORFs_org_Mouse
    Downstream
    Overlapping
    sORF
Brain, E14, MEF,
NSC, Skin_tumor, v6-5
1221465 78

AAG ...

KPT ...

Ribo-seq
AAG

weak

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
E14
820548 48

GTG ...

VIN ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
MEF, NSC
53561 81

CTG ...

LPG ...

Ribo-seq
CTG

moderate

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14, NSC,
v6-5
53581 42

TTG ...

LLL ...

Ribo-seq
TTG

weak

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, MEF, NSC,
v6-5
540262 36

TTG ...

LKL ...

Ribo-seq
TTG

moderate

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3
504614 84

CTG ...

LPK ...

Ribo-seq
CTG

moderate

6 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
506470 141

GTG ...

VNS ...

Ribo-seq
GTG

5 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
1223465 51

AGG ...

RLK ...

Ribo-seq
AGG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14
1221361 66

ATT ...

IKT ...

Ribo-seq
ATT

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14
508164 54

CTG ...

LRN ...

Ribo-seq
CTG

5 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, E14, NSC,
v6-5
544070 99

ATG ...

MMM ...

Ribo-seq
ATG

6 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
53773 30

GTG ...

VAA ...

Ribo-seq
GTG

strong

2 sORFs_org_Mouse
    Alternative
    sORF
    Upstream
3T3, v6-5
506049 60

GTG ...

VYV ...

Ribo-seq
GTG

moderate

7 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
892917 42

AAG ...

KYT ...

Ribo-seq
AAG

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14
413611 30

ATG ...

MNI ...

Ribo-seq
ATG

moderate

4 sORFs_org_Mouse
    Alternative
    sORF
    Upstream
C2C12, E14, MEF
504795 57

ATG ...

MRK ...

Ribo-seq
ATG

weak

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC
507817 33

GTG ...

VHD ...

Ribo-seq
GTG

7 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
820121 30

CTG ...

LFG ...

Ribo-seq
CTG

moderate

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
MEF, v6-5
507513 48

TTG ...

LVK ...

Ribo-seq
TTG

5 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
MEF, Neutrophil, NSC,
v6-5
506804 36

GTG ...

VCK ...

Ribo-seq
GTG

weak

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14, MEF, NSC,
v6-5
504885 66

CTG ...

LLT ...

Ribo-seq
CTG

moderate

6 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
893837 51

ATA ...

IVL ...

Ribo-seq
ATA

strong

1 sORFs_org_Mouse
    Downstream
    Overlapping
    sORF
E14
752052 30

CTG ...

LKI ...

Ribo-seq
CTG

moderate

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, MEF, NSC
1224365 159

AAG ...

KKR ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
E14
1221980 87

AAG ...

KKL ...

Ribo-seq
AAG

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14
52290 48

GTG ...

VSS ...

Ribo-seq
GTG

moderate

2 sORFs_org_Mouse
    Alternative
    sORF
    Upstream
3T3, v6-5
1646688 48

CTG ...

LNI ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    Alternative
    Downstream
    Overlapping
    sORF
MEF
507774 45

GTG ...

VKH ...

Ribo-seq
GTG

6 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
1221995 42

TTG ...

LEQ ...

Ribo-seq
TTG

moderate

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14, MEF, NSC
502783 150

ATG ...

MNI ...

Ribo-seq
ATG

5 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
142236 72

ATG ...

MDP ...

Ribo-seq
ATG

5 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, Brain, E14,
NSC, v6-5
1223170 57

AGG ...

RPW ...

Ribo-seq
AGG

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14
1224194 135

AAG ...

KKS ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
E14
1173039 33

CTG ...

LPL ...

Ribo-seq
CTG

weak

3 sORFs_org_Mouse
    Alternative
    sORF
    Upstream
MEF, v6-5
749900 105

ATG ...

MME ...

Ribo-seq
ATG

moderate

5 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
1171665 33

TTG ...

LRS ...

Ribo-seq
TTG

4 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
E14, MEF, NSC,
v6-5
504904 240

GTG ...

VGK ...

Ribo-seq
GTG

moderate

2 sORFs_org_Mouse
    Alternative
    sORF
    Upstream
B_cell, Spleen_B_cell
751885 63

ATG ...

MYF ...

Ribo-seq
ATG

moderate

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14
894525 57

ACG ...

TEI ...

Ribo-seq
ACG

moderate

1 sORFs_org_Mouse
    Downstream
    Overlapping
    sORF
E14
1222275 90

AAG ...

KKL ...

Ribo-seq
AAG

moderate

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
E14
128429 33

ATG ...

MDP ...

Ribo-seq
ATG

4 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, Brain, E14,
v6-5
139073 45

CTG ...

LST ...

Ribo-seq
CTG

moderate

6 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, Brain, E14,
MEF, NSC, v6-5
816906 36

CTG ...

LLK ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
NSC
893105 33

ATT ...

ILV ...

Ribo-seq
ATT

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14
506708 165

CTG ...

LIK ...

Ribo-seq
CTG

5 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
1218972 93

AGG ...

RNL ...

Ribo-seq
AGG

moderate

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
E14
506106 30

TTG ...

LHG ...

Ribo-seq
TTG

moderate

5 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
894760 45

ATC ...

IFL ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
E14
502908 39

GTG ...

VKH ...

Ribo-seq
GTG

6 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
504876 69

ATG ...

MLL ...

Ribo-seq
ATG

moderate

7 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
Neutrophil, NSC, v6-5
503883 42

TTG ...

LVK ...

Ribo-seq
TTG

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
MEF, Neutrophil, v6-5
507073 39

GTG ...

VCS ...

Ribo-seq
GTG

moderate

5 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC
1223906 117

ATC ...

IRK ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
E14
51885 63

ATG ...

MKS ...

Ribo-seq
ATG

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC, MEF, NSC,
v6-5
537983 33

ATG ...

MTS ...

Ribo-seq
ATG

weak

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
3T3, E14
543298 96

ATG ...

MMT ...

Ribo-seq
ATG

4 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
v6-5
747525 45

TTG ...

LGL ...

Ribo-seq
TTG

5 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
3T3, E14, MEF,
NSC, v6-5
51886 ENSMUST00000029303 Naa15-201 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

894525 57

ACG ...

TEI ...

Ribo-seq
ACG

moderate

1 sORFs_org_Mouse
    Alternative
    Downstream
    Overlapping
    sORF
BMDC
17105 45

CTG ...

LQK ...

Ribo-seq
CTG

moderate

3 sORFs_org_Mouse
    Alternative
    Downstream
    Overlapping
    sORF
B_cell, MEF, R1E
504614 84

CTG ...

LPK ...

Ribo-seq
CTG

moderate

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, Brain, R1E,
Spleen_B_cell
504795 57

ATG ...

MRK ...

Ribo-seq
ATG

weak

1 Johnstone2016
    Alternative
    InCDS
    Overlapping
    sORF
Glioma, Liver, MEF,
MESC
541017 81

TTG ...

LEA ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, Brain, R1E
52218 36

TTG ...

LIL ...

Ribo-seq
TTG

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
54264 39

TTG ...

LPL ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
140028 42

ATG ...

MIK ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain
819857 33

TTG ...

LGP ...

Ribo-seq
TTG

strong

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain
52588 42

GTG ...

VKV ...

Ribo-seq
GTG

weak

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Testis
537983 33

ATG ...

MTS ...

Ribo-seq
ATG

weak

2 sORFs_org_Mouse
Johnstone2016
    Alternative
    InCDS
    Overlapping
    sORF
Brain, Glioma, Liver,
MEF, MESC
505246 42

ATG ...

MLW ...

Ribo-seq
ATG

weak

5 sORFs_org_Mouse
Johnstone2016
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, Brain, Glioma,
Liver, MEF, MESC,
R1E, Spleen_B_cell
504256 66

ATG ...

MKP ...

Ribo-seq
ATG

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain
52906 30

GTG ...

VHD ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Testis
894760 45

ATC ...

IFL ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC
52752 99

CTG ...

LGI ...

Ribo-seq
CTG

strong

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, Testis
508164 54

CTG ...

LRN ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, Brain, Spleen_B_cell
893837 51

ATA ...

IVL ...

Ribo-seq
ATA

strong

1 sORFs_org_Mouse
    Alternative
    Downstream
    Overlapping
    sORF
BMDC
506351 57

ATG ...

MKC ...

Ribo-seq
ATG

weak

1 Johnstone2016
    InCDS
    Overlapping
    sORF
Glioma, Liver, MEF,
MESC
506106 30

TTG ...

LHG ...

Ribo-seq
TTG

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Spleen_B_cell
51885 63

ATG ...

MKS ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC, Testis
507513 48

TTG ...

LVK ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Brain, R1E, Spleen_B_cell
17094 45

ATG ...

MDW ...

Ribo-seq
ATG

strong

2 sORFs_org_Mouse
Johnstone2016
    InCDS
    Overlapping
    sORF
BMDC, Glioma, Liver,
MEF, MESC
55472 144

ATG ...

MQK ...

Ribo-seq
ATG

6 sORFs_org_Mouse
Johnstone2016
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, Glioma, Liver,
MEF, MESC, R1E,
Spleen_B_cell, Testis
136857 36

TTG ...

LMD ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, R1E
893375 72

AAG ...

KML ...

Ribo-seq
AAG

weak

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
BMDC
53581 42

TTG ...

LLL ...

Ribo-seq
TTG

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Testis
892917 42

AAG ...

KYT ...

Ribo-seq
AAG

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC
413611 30

ATG ...

MNI ...

Ribo-seq
ATG

moderate

1 Johnstone2016
    InCDS
    Overlapping
    sORF
Glioma, Liver, MEF,
MESC
749900 105

ATG ...

MME ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain
507132 147

GTG ...

VAA ...

Ribo-seq
GTG

strong

2 sORFs_org_Mouse
    Alternative
    sORF
    Upstream
B_cell, Spleen_B_cell
894413 57

ATA ...

ISF ...

Ribo-seq
ATA

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC
142236 72

ATG ...

MDP ...

Ribo-seq
ATG

3 sORFs_org_Mouse
Johnstone2016
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, Glioma, Liver,
MEF, MESC, Spleen_B_cell
506713 180

GTG ...

VNR ...

Ribo-seq
GTG

weak

2 sORFs_org_Mouse
    Alternative
    sORF
    Upstream
B_cell, Spleen_B_cell
507817 33

GTG ...

VHD ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Spleen_B_cell
894288 54

ATT ...

IKT ...

Ribo-seq
ATT

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC
144861 75

TTG ...

LMD ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, R1E, Spleen_B_cell
53773 30

GTG ...

VAA ...

Ribo-seq
GTG

strong

4 sORFs_org_Mouse
    sORF
    Upstream
B_cell, R1E, Spleen_B_cell,
Testis
128429 33

ATG ...

MDP ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
R1E
893105 33

ATT ...

ILV ...

Ribo-seq
ATT

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC
894256 66

AAG ...

KMY ...

Ribo-seq
AAG

weak

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC
543298 96

ATG ...

MMT ...

Ribo-seq
ATG

4 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, Brain, MEF,
R1E
54156 102

ATG ...

MLG ...

Ribo-seq
ATG

moderate

3 sORFs_org_Mouse
Johnstone2016
    Alternative
    InCDS
    Overlapping
    sORF
Brain, Glioma, Liver,
MEF, MESC, Testis
136691 33

TTG ...

LVS ...

Ribo-seq
TTG

strong

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain
55534 48

CTG ...

LKK ...

Ribo-seq
CTG

6 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, MEF, R1E,
Spleen_B_cell, Testis
506804 36

GTG ...

VCK ...

Ribo-seq
GTG

weak

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
Brain
507073 39

GTG ...

VCS ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC
53561 81

CTG ...

LPG ...

Ribo-seq
CTG

moderate

2 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain, Testis
543793 45

TTG ...

LGL ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, MEF, R1E
541773 93

ATG ...

MTK ...

Ribo-seq
ATG

3 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, Brain, MEF
507774 45

GTG ...

VKH ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, Spleen_B_cell
893357 48

ATC ...

IHF ...

Ribo-seq
ATC

moderate

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
BMDC
52290 48

GTG ...

VSS ...

Ribo-seq
GTG

moderate

4 sORFs_org_Mouse
    sORF
    Upstream
B_cell, R1E, Spleen_B_cell,
Testis
504986 30

TTG ...

LVM ...

Ribo-seq
TTG

strong

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain
507279 54

GTG ...

VSG ...

Ribo-seq
GTG

moderate

2 sORFs_org_Mouse
    Alternative
    sORF
    Upstream
B_cell, Spleen_B_cell
544070 99

ATG ...

MMM ...

Ribo-seq
ATG

5 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
B_cell, BMDC, Brain,
MEF, R1E
751885 63

ATG ...

MYF ...

Ribo-seq
ATG

moderate

2 sORFs_org_Mouse
Johnstone2016
    Alternative
    InCDS
    Overlapping
    sORF
Brain, Glioma, Liver,
MEF, MESC
508656 48

GTG ...

VLA ...

Ribo-seq
GTG

3 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
B_cell, Brain, Spleen_B_cell
536770 102

ATG ...

MER ...

Ribo-seq
ATG

strong

1 sORFs_org_Mouse
    Alternative
    InCDS
    Overlapping
    sORF
Brain
505370 ENSMUST00000193267 Naa15-206 retained_intron
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

1219011 99

CTG ...

LAT ...

Ribo-seq
CTG

strong

1 sORFs_org_Mouse
    Intronic
    sORF
E14
1219519 33

AAG ...

KTY ...

Ribo-seq
AAG

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
E14
1218647 30

ATA ...

IDY ...

Ribo-seq
ATA

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
E14
1219082 51

ATC ...

IVF ...

Ribo-seq
ATC

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
E14
1223174 30

ACG ...

TSN ...

Ribo-seq
ACG

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
E14
1220441 42

ATC ...

IPH ...

Ribo-seq
ATC

weak

1 sORFs_org_Mouse
    Intronic
    sORF
E14
136857 36

TTG ...

LMD ...

Ribo-seq
TTG

weak

2 sORFs_org_Mouse
    Intronic
    sORF
B_cell, Spleen_B_cell
1221017 42

ATT ...

IHC ...

Ribo-seq
ATT

weak

1 sORFs_org_Mouse
    Intronic
    sORF
E14
1220457 105

ATA ...

IEL ...

Ribo-seq
ATA

strong

1 sORFs_org_Mouse
    Intronic
    sORF
E14
128429 33

ATG ...

MDP ...

Ribo-seq
ATG

moderate

3 sORFs_org_Mouse
    Intronic
    sORF
B_cell, E14, Spleen_B_cell
1221995 42

TTG ...

LEQ ...

Ribo-seq
TTG

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
E14
505401 ENSMUST00000193694 Naa15-207 retained_intron
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

138765 186

CTG ...

LRN ...

Ribo-seq
CTG

5 sORFs_org_Mouse
    Intronic
    sORF
E14, MEF, Neutrophil,
Spleen_B_cell
751885 63

ATG ...

MYF ...

Ribo-seq
ATG

moderate

2 sORFs_org_Mouse
    Intronic
    sORF
E14, v6-5
1647851 84

CTG ...

LTD ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Intronic
    sORF
MEF
505400 186

GTG ...

VDL ...

Ribo-seq
GTG

7 sORFs_org_Mouse
    Intronic
    sORF
E14, MEF, Neutrophil,
NSC, Spleen_B_cell, v6-5
819694 105

TTG ...

LKL ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    Intronic
    sORF
MEF, Neutrophil
1218902 ENSMUST00000192197 Naa15-202 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

1218901 105

AAG ...

KQV ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    sORF
E14
51885 63

ATG ...

MKS ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    sORF
E14
1222565 162

ATA ...

IKW ...

Ribo-seq
ATA

1 sORFs_org_Mouse
    sORF
E14
1222710 117

AAG ...

KFF ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    sORF
E14
3122817 UNKNOWN_TRANSCRIPT
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

55472 144

ATG ...

MQK ...

Predicted
ATG

1 Samandi2017
    sORF
54156 102

ATG ...

MLG ...

Predicted
ATG

1 Samandi2017
    sORF
138766 ENSMUST00000194685 Naa15-208 retained_intron
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

1218048 243

AAG ...

KKS ...

Ribo-seq
AAG

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
E14
1220541 252

ATG ...

MQK ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
E14
1222923 201

ATG ...

MTK ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
E14
1220287 93

AAG ...

KKK ...

Ribo-seq
AAG

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
E14
1222172 267

AAG ...

KKR ...

Ribo-seq
AAG

weak

1 sORFs_org_Mouse
    Intronic
    sORF
E14
1219599 225

ATC ...

IRK ...

Ribo-seq
ATC

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
E14
1013717 30

CTG ...

LAK ...

Ribo-seq
CTG

strong

1 sORFs_org_Mouse
    Intronic
    sORF
E14
1219027 93

AAG ...

KKS ...

Ribo-seq
AAG

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
E14
1222763 207

ATG ...

MMM ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
E14
1220459 159

AAG ...

KKA ...

Ribo-seq
AAG

weak

1 sORFs_org_Mouse
    Intronic
    sORF
E14
1219840 36

ATA ...

INK ...

Ribo-seq
ATA

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
E14
138765 186

CTG ...

LRN ...

Ribo-seq
CTG

moderate

2 sORFs_org_Mouse
    Intronic
    sORF
Brain, E14
1219777 42

ATC ...

IPE ...

Ribo-seq
ATC

weak

1 sORFs_org_Mouse
    Intronic
    sORF
E14
536156 ENSMUST00000192419 Naa15-203 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

506071 51

CTG ...

LHR ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    sORF
3T3
503386 36

ATG ...

MMK ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    sORF
3T3
504496 72

ATG ...

MFM ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    sORF
3T3
506869 66

ATG ...

MAF ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    sORF
3T3

ORFs

173 ORFs
9 known transcripts
292 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

816650 39

TTG...

LLL...

TTG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, MEF, NSC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
1 sORFs_org_Mouse
504842 117

CTG...

LKW...

CTG Intronic
sORF
ncRNA
E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5, B_cell, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1056529 ENSMUST00000195430 Naa15-209 retained_intron Ribo-seq
moderate 7 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
51885 63

ATG...

MKS...

ATG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, Spleen_B_cell, E14,
BMDC, Testis, MEF,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
1218902 ENSMUST00000192197 Naa15-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
2 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
4 sORFs_org_Mouse
52752 99

CTG...

LGI...

CTG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, MEF, Brain,
Testis, 3T3, E14,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
strong 2 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
strong 3 sORFs_org_Mouse
819857 33

TTG...

LGP...

TTG Alternative
InCDS
Overlapping
sORF
ncRNA
E14, MEF, NSC,
v6-5, Brain, B_cell,
R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
strong 5 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
1013717 30

CTG...

LAK...

CTG ncRNA
sORF
Intronic
Brain, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
1 sORFs_org_Mouse
138766 ENSMUST00000194685 Naa15-208 retained_intron Ribo-seq
strong 1 sORFs_org_Mouse
543793 45

TTG...

LGL...

TTG InCDS
Overlapping
sORF
Alternative
3T3, E14, MEF,
NSC, v6-5, B_cell,
R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
5 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
3 sORFs_org_Mouse
52218 36

TTG...

LIL...

TTG Alternative
InCDS
Overlapping
sORF
3T3, BMDC, E14,
MEF, NSC, v6-5,
Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 6 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
52588 42

GTG...

VKV...

GTG Alternative
InCDS
Overlapping
sORF
3T3, Brain, E14,
MEF, NSC, v6-5,
Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 7 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
894525 57

ACG...

TEI...

ACG Alternative
Downstream
Overlapping
sORF
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1218249 33

AGG...

RCW...

AGG InCDS
Overlapping
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
506869 66

ATG...

MAF...

ATG Intronic
sORF
ncRNA
MEF, NSC, v6-5,
B_cell, Spleen_B_cell, 3T3
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1056529 ENSMUST00000195430 Naa15-209 retained_intron Ribo-seq
moderate 4 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
536156 ENSMUST00000192419 Naa15-203 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
536770 102

ATG...

MER...

ATG InCDS
Overlapping
sORF
ncRNA
Alternative
3T3, E14, MEF,
NSC, v6-5, B_cell,
R1E, Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
strong 6 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
505710 30

GTG...

VLQ...

GTG ncRNA
sORF
Intronic
B_cell, Spleen_B_cell, E14,
Liver, MEF, NSC,
R1E, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
1056529 ENSMUST00000195430 Naa15-209 retained_intron Ribo-seq
weak 7 sORFs_org_Mouse
505246 42

ATG...

MLW...

ATG InCDS
Overlapping
sORF
Alternative
3T3, BMDC, E14,
MEF, NSC, v6-5,
B_cell, Brain, Glioma,
Liver, MESC, R1E,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 7 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
weak 5 sORFs_org_Mouse
Johnstone2016
506071 51

CTG...

LHR...

CTG ncRNA
sORF
Intronic
B_cell, Spleen_B_cell, 3T3,
E14, MEF, NSC,
R1E, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
536156 ENSMUST00000192419 Naa15-203 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1056529 ENSMUST00000195430 Naa15-209 retained_intron Ribo-seq
moderate 5 sORFs_org_Mouse
17105 45

CTG...

LQK...

CTG Alternative
Downstream
Overlapping
sORF
B_cell, MEF, R1E,
Brain, E14, NSC,
Skin_tumor, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
moderate 3 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 8 sORFs_org_Mouse
53561 81

CTG...

LPG...

CTG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, MEF, 3T3,
E14, NSC, v6-5,
Brain, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 4 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
1648869 42

TTG...

LQS...

TTG Alternative
sORF
Upstream
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
1 sORFs_org_Mouse
819826 114

TTG...

LFF...

TTG Intronic
sORF
ncRNA
E14, MEF, NSC,
R1E, v6-5, B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1056529 ENSMUST00000195430 Naa15-209 retained_intron Ribo-seq
moderate 5 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
1 sORFs_org_Mouse
144861 75

TTG...

LMD...

TTG InCDS
Overlapping
sORF
Alternative
3T3, Brain, NSC,
v6-5, B_cell, R1E,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
4 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
3 sORFs_org_Mouse
1219011 99

CTG...

LAT...

CTG Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

505370 ENSMUST00000193267 Naa15-206 retained_intron Ribo-seq
strong 1 sORFs_org_Mouse
504614 84

CTG...

LPK...

CTG Alternative
InCDS
Overlapping
sORF
B_cell, Brain, R1E,
Spleen_B_cell, 3T3, E14,
MEF, NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
moderate 4 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 6 sORFs_org_Mouse
507143 63

CTG...

LTF...

CTG Alternative
InCDS
Overlapping
sORF
ncRNA
3T3, E14, MEF,
NSC, v6-5, B_cell,
R1E, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 6 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
3 sORFs_org_Mouse
504795 57

ATG...

MRK...

ATG Alternative
InCDS
Overlapping
sORF
ncRNA
Glioma, Liver, MEF,
MESC, B_cell, R1E,
Spleen_B_cell, 3T3, E14,
NSC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
weak 1 Johnstone2016
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
4 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 4 sORFs_org_Mouse
136691 33

TTG...

LVS...

TTG InCDS
Overlapping
sORF
Alternative
ncRNA
BMDC, Brain, E14,
NSC, v6-5, MEF,
R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
strong 5 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
541017 81

TTG...

LEA...

TTG InCDS
Overlapping
sORF
Alternative
3T3, E14, NSC,
v6-5, B_cell, Brain,
R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
4 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
3 sORFs_org_Mouse
506470 141

GTG...

VNS...

GTG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, R1E, Spleen_B_cell,
3T3, E14, MEF,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
3 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
5 sORFs_org_Mouse
508656 48

GTG...

VLA...

GTG Alternative
InCDS
Overlapping
sORF
E14, MEF, NSC,
v6-5, B_cell, Brain,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
4 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
3 sORFs_org_Mouse
504680 102

TTG...

LNC...

TTG ncRNA
sORF
B_cell, Brain, MEF,
R1E, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
6 sORFs_org_Mouse
541773 93

ATG...

MTK...

ATG InCDS
Overlapping
sORF
Alternative
3T3, E14, MEF,
NSC, v6-5, B_cell,
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
6 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
3 sORFs_org_Mouse
1222755 144

AGG...

RGK...

AGG sORF
Upstream
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
54264 39

TTG...

LPL...

TTG Alternative
InCDS
Overlapping
sORF
Testis, E14, MEF,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
5 sORFs_org_Mouse
504256 66

ATG...

MKP...

ATG Alternative
InCDS
Overlapping
sORF
ncRNA
3T3, E14, MEF,
NSC, v6-5, Brain,
B_cell, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 6 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
1221491 39

ATT...

ITL...

ATT Alternative
InCDS
Overlapping
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
819538 33

TTG...

LKK...

TTG Alternative
InCDS
Overlapping
sORF
ncRNA
NSC, B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
1 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1221975 36

ATC...

IHC...

ATC Alternative
InCDS
Overlapping
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
138765 186

CTG...

LRN...

CTG Intronic
sORF
ncRNA
E14, MEF, Neutrophil,
Spleen_B_cell, Brain, B_cell,
Liver, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

505401 ENSMUST00000193694 Naa15-207 retained_intron Ribo-seq
5 sORFs_org_Mouse
138766 ENSMUST00000194685 Naa15-208 retained_intron Ribo-seq
moderate 2 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
3 sORFs_org_Mouse
504426 123

TTG...

LQL...

TTG ncRNA
sORF
B_cell, Brain, Liver,
MEF, R1E, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
6 sORFs_org_Mouse
502737 54

TTG...

LLN...

TTG ncRNA
sORF
B_cell, MEF, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
4 sORFs_org_Mouse
140028 42

ATG...

MIK...

ATG Alternative
InCDS
Overlapping
sORF
ncRNA
Brain, E14, MEF,
NSC, v6-5, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 6 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
1218901 105

AAG...

KQV...

AAG sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1218902 ENSMUST00000192197 Naa15-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
817861 30

CTG...

LPL...

CTG ncRNA
sORF
B_cell, MEF, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
4 sORFs_org_Mouse
1882418 147

TTG...

LEE...

TTG ncRNA
sORF
R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
1 sORFs_org_Mouse
507279 54

GTG...

VSG...

GTG Alternative
sORF
Upstream
3T3, MEF, Neutrophil,
B_cell, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 4 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
504872 213

TTG...

LAA...

TTG Alternative
sORF
Upstream
B_cell, E14, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
strong 3 sORFs_org_Mouse
507401 72

CTG...

LEH...

CTG ncRNA
sORF
B_cell, Liver, MEF,
R1E, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
5 sORFs_org_Mouse
819752 198

TTG...

LAF...

TTG ncRNA
sORF
B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
1 sORFs_org_Mouse
55472 144

ATG...

MQK...

ATG sORF
InCDS
Overlapping
Alternative
3T3, E14,
MEF, NSC, v6-5,
B_cell, Glioma, Liver,
MESC, R1E, Spleen_B_cell,
Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3122817 UNKNOWN_TRANSCRIPT Predicted
1 Samandi2017
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
6 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
6 sORFs_org_Mouse
Johnstone2016
506351 57

ATG...

MKC...

ATG Alternative
InCDS
Overlapping
sORF
ncRNA
3T3, E14, MEF,
NSC, v6-5, Glioma,
Liver, MESC, B_cell,
R1E, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 7 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
weak 1 Johnstone2016
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
5 sORFs_org_Mouse
1218048 243

AAG...

KKS...

AAG Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

138766 ENSMUST00000194685 Naa15-208 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
55534 48

CTG...

LKK...

CTG Alternative
InCDS
Overlapping
sORF
3T3, E14, MEF,
Neutrophil, v6-5, B_cell,
R1E, Spleen_B_cell, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
5 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
6 sORFs_org_Mouse
1682942 33

GTG...

VIF...

GTG ncRNA
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
1 sORFs_org_Mouse
505400 186

GTG...

VDL...

GTG ncRNA
sORF
Intronic
B_cell, Liver, R1E,
E14, MEF, Neutrophil,
NSC, Spleen_B_cell, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
3 sORFs_org_Mouse
505401 ENSMUST00000193694 Naa15-207 retained_intron Ribo-seq
7 sORFs_org_Mouse
1219519 33

AAG...

KTY...

AAG Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

505370 ENSMUST00000193267 Naa15-206 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
816916 69

CTG...

LQI...

CTG Intronic
sORF
ncRNA
Neutrophil, B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1056529 ENSMUST00000195430 Naa15-209 retained_intron Ribo-seq
weak 1 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
1 sORFs_org_Mouse
139073 45

CTG...

LST...

CTG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, R1E, Spleen_B_cell,
3T3, Brain, E14,
MEF, NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
3 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 6 sORFs_org_Mouse
504885 66

CTG...

LLT...

CTG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, R1E, Spleen_B_cell,
3T3, E14, MEF,
Neutrophil, NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
3 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 6 sORFs_org_Mouse
1220541 252

ATG...

MQK...

ATG Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

138766 ENSMUST00000194685 Naa15-208 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
893357 48

ATC...

IHF...

ATC Alternative
InCDS
Overlapping
sORF
E14, BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1171665 33

TTG...

LRS...

TTG ncRNA
sORF
InCDS
Overlapping
MEF, E14, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
1 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
4 sORFs_org_Mouse
537983 33

ATG...

MTS...

ATG Alternative
InCDS
Overlapping
sORF
ncRNA
Brain, Glioma, Liver,
MEF, MESC, B_cell,
R1E, 3T3, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
weak 2 sORFs_org_Mouse
Johnstone2016
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
3 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 2 sORFs_org_Mouse
820121 30

CTG...

LFG...

CTG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, MEF, R1E,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
3 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 3 sORFs_org_Mouse
747525 45

TTG...

LGL...

TTG ncRNA
sORF
InCDS
Overlapping
B_cell, MEF, R1E,
3T3, E14, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
3 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
5 sORFs_org_Mouse
1224127 39

AGG...

RLK...

AGG InCDS
Overlapping
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
1 sORFs_org_Mouse
52906 30

GTG...

VHD...

GTG InCDS
Overlapping
sORF
Alternative
ncRNA
Testis, E14, MEF,
NSC, v6-5, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
6 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
17094 45

ATG...

MDW...

ATG Alternative
InCDS
Overlapping
sORF
ncRNA
Intronic
Skin_tumor, BMDC, Glioma,
Liver, MEF, MESC,
B_cell, Spleen_B_cell, E14,
Neutrophil, NSC, R1E,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
strong 2 sORFs_org_Mouse
Johnstone2016
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
1056529 ENSMUST00000195430 Naa15-209 retained_intron Ribo-seq
strong 8 sORFs_org_Mouse
820139 165

TTG...

LLQ...

TTG Intronic
sORF
ncRNA
E14, Liver, MEF,
Neutrophil, R1E, v6-5,
B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1056529 ENSMUST00000195430 Naa15-209 retained_intron Ribo-seq
weak 6 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
1 sORFs_org_Mouse
507073 39

GTG...

VCS...

GTG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, MEF, R1E,
Spleen_B_cell, BMDC, 3T3,
E14, NSC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
4 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 5 sORFs_org_Mouse
820548 48

GTG...

VIN...

GTG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, MEF, NSC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
1 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
2 sORFs_org_Mouse
1219681 30

ATA...

ILQ...

ATA InCDS
Overlapping
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
894760 45

ATC...

IFL...

ATC Alternative
InCDS
Overlapping
sORF
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
1 sORFs_org_Mouse
504325 108

TTG...

LED...

TTG ncRNA
sORF
B_cell, Liver, R1E,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
4 sORFs_org_Mouse
506942 66

TTG...

LVR...

TTG ncRNA
sORF
B_cell, Brain, R1E,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
4 sORFs_org_Mouse
817707 66

CTG...

LIK...

CTG ncRNA
sORF
B_cell, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
504986 30

TTG...

LVM...

TTG ncRNA
sORF
Intronic
Alternative
InCDS
Overlapping
B_cell, Spleen_B_cell, E14,
NSC, v6-5, Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
1056529 ENSMUST00000195430 Naa15-209 retained_intron Ribo-seq
strong 3 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
503386 36

ATG...

MMK...

ATG sORF
Intronic
ncRNA
3T3, E14, MEF,
NSC, v6-5, B_cell,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

536156 ENSMUST00000192419 Naa15-203 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1056529 ENSMUST00000195430 Naa15-209 retained_intron Ribo-seq
moderate 4 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
505526 54

GTG...

VVP...

GTG InCDS
Overlapping
sORF
ncRNA
3T3, E14, MEF,
NSC, v6-5, B_cell,
R1E, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 6 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
5 sORFs_org_Mouse
136857 36

TTG...

LMD...

TTG InCDS
Overlapping
sORF
Alternative
Intronic
3T3, Brain, E14,
v6-5, R1E, B_cell,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
4 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
2 sORFs_org_Mouse
505370 ENSMUST00000193267 Naa15-206 retained_intron Ribo-seq
weak 2 sORFs_org_Mouse
506549 249

GTG...

VTR...

GTG Alternative
sORF
Upstream
B_cell, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
1218647 30

ATA...

IDY...

ATA Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

505370 ENSMUST00000193267 Naa15-206 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
504876 69

ATG...

MLL...

ATG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, R1E, Spleen_B_cell,
3T3, E14, MEF,
Neutrophil, NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
3 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 7 sORFs_org_Mouse
1222923 201

ATG...

MTK...

ATG Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

138766 ENSMUST00000194685 Naa15-208 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
506661 147

GTG...

VDY...

GTG ncRNA
sORF
B_cell, Liver, MEF,
R1E, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
5 sORFs_org_Mouse
1220287 93

AAG...

KKK...

AAG Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

138766 ENSMUST00000194685 Naa15-208 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
508164 54

CTG...

LRN...

CTG Alternative
InCDS
Overlapping
sORF
B_cell, Brain, Spleen_B_cell,
3T3, E14, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
3 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
5 sORFs_org_Mouse
818147 78

TTG...

LLL...

TTG ncRNA
sORF
B_cell, MEF, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
4 sORFs_org_Mouse
502908 39

GTG...

VKH...

GTG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, Spleen_B_cell, E14,
MEF, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
6 sORFs_org_Mouse
893837 51

ATA...

IVL...

ATA Alternative
Downstream
Overlapping
sORF
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
816906 36

CTG...

LLK...

CTG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, MEF, NSC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
1 sORFs_org_Mouse
504496 72

ATG...

MFM...

ATG sORF
Intronic
ncRNA
3T3, MEF, NSC,
R1E, v6-5, B_cell,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

536156 ENSMUST00000192419 Naa15-203 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1056529 ENSMUST00000195430 Naa15-209 retained_intron Ribo-seq
moderate 5 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
506708 165

CTG...

LIK...

CTG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, MEF, R1E,
Spleen_B_cell, 3T3, E14,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
4 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
5 sORFs_org_Mouse
54156 102

ATG...

MLG...

ATG Alternative
InCDS
Overlapping
sORF
ncRNA
3T3, E14, MEF,
Neutrophil, v6-5,
B_cell, R1E, Spleen_B_cell,
Brain, Glioma, Liver,
MESC, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 5 sORFs_org_Mouse
3122817 UNKNOWN_TRANSCRIPT Predicted
1 Samandi2017
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
3 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
moderate 3 sORFs_org_Mouse
Johnstone2016
503789 126

CTG...

LNE...

CTG ncRNA
sORF
B_cell, Liver, R1E,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
4 sORFs_org_Mouse
818273 180

TTG...

LCR...

TTG ncRNA
sORF
B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
1 sORFs_org_Mouse
504177 45

TTG...

LAC...

TTG ncRNA
sORF
Intronic
B_cell, Spleen_B_cell, E14,
MEF, NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
1056529 ENSMUST00000195430 Naa15-209 retained_intron Ribo-seq
strong 5 sORFs_org_Mouse
1223450 45

AAG...

KKC...

AAG Alternative
InCDS
Overlapping
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
1 sORFs_org_Mouse
506882 93

TTG...

LGK...

TTG ncRNA
sORF
B_cell, Brain, MEF,
R1E, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
5 sORFs_org_Mouse
1219082 51

ATC...

IVF...

ATC Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

505370 ENSMUST00000193267 Naa15-206 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
506106 30

TTG...

LHG...

TTG Alternative
InCDS
Overlapping
sORF
Spleen_B_cell, 3T3, E14,
MEF, NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 5 sORFs_org_Mouse
506912 126

CTG...

LDT...

CTG ncRNA
sORF
B_cell, Liver, R1E,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
4 sORFs_org_Mouse
1222172 267

AAG...

KKR...

AAG Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

138766 ENSMUST00000194685 Naa15-208 retained_intron Ribo-seq
weak 1 sORFs_org_Mouse
818657 186

GTG...

VSL...

GTG ncRNA
sORF
B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
1 sORFs_org_Mouse
504419 51

TTG...

LRN...

TTG ncRNA
sORF
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
1 sORFs_org_Mouse
507513 48

TTG...

LVK...

TTG InCDS
Overlapping
sORF
Alternative
Brain, R1E, Spleen_B_cell,
MEF, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
3 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
5 sORFs_org_Mouse
820260 102

TTG...

LIT...

TTG ncRNA
sORF
B_cell, MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
817066 117

TTG...

LYL...

TTG ncRNA
sORF
B_cell, MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
503883 42

TTG...

LVK...

TTG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, Spleen_B_cell, MEF,
Neutrophil, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
4 sORFs_org_Mouse
1221465 78

AAG...

KPT...

AAG InCDS
Overlapping
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
506321 33

ATG...

MKP...

ATG ncRNA
sORF
Intronic
B_cell, Spleen_B_cell, E14,
MEF, NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
1056529 ENSMUST00000195430 Naa15-209 retained_intron Ribo-seq
moderate 4 sORFs_org_Mouse
506718 126

CTG...

LLQ...

CTG ncRNA
sORF
B_cell, Brain, MEF,
R1E, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
5 sORFs_org_Mouse
1223174 30

ACG...

TSN...

ACG Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

505370 ENSMUST00000193267 Naa15-206 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
53581 42

TTG...

LLL...

TTG Alternative
InCDS
Overlapping
sORF
3T3, MEF, NSC,
v6-5, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 4 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
540262 36

TTG...

LKL...

TTG InCDS
Overlapping
sORF
3T3
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
893375 72

AAG...

KML...

AAG InCDS
Overlapping
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
892917 42

AAG...

KYT...

AAG Alternative
InCDS
Overlapping
sORF
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
1223465 51

AGG...

RLK...

AGG Alternative
InCDS
Overlapping
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
1 sORFs_org_Mouse
1220441 42

ATC...

IPH...

ATC Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

505370 ENSMUST00000193267 Naa15-206 retained_intron Ribo-seq
weak 1 sORFs_org_Mouse
503795 117

TTG...

LCR...

TTG ncRNA
sORF
B_cell, Brain, Liver,
MEF, R1E, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
6 sORFs_org_Mouse
1221361 66

ATT...

IKT...

ATT Alternative
InCDS
Overlapping
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
751885 63

ATG...

MYF...

ATG Intronic
sORF
ncRNA
Alternative
InCDS
Overlapping
E14, v6-5, B_cell,
R1E, 3T3, Brain,
Glioma, Liver, MEF,
MESC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

505401 ENSMUST00000193694 Naa15-207 retained_intron Ribo-seq
moderate 2 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
Johnstone2016
1881742 132

TTG...

LIS...

TTG ncRNA
sORF
R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
1 sORFs_org_Mouse
544070 99

ATG...

MMM...

ATG InCDS
Overlapping
sORF
Alternative
3T3, E14, MEF,
NSC, v6-5, B_cell,
BMDC, Brain, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
6 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
5 sORFs_org_Mouse
53773 30

GTG...

VAA...

GTG Alternative
sORF
Upstream
3T3, v6-5, B_cell,
R1E, Spleen_B_cell, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
strong 2 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
strong 4 sORFs_org_Mouse
1219599 225

ATC...

IRK...

ATC Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

138766 ENSMUST00000194685 Naa15-208 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
817780 123

TTG...

LFL...

TTG ncRNA
sORF
B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
1 sORFs_org_Mouse
413611 30

ATG...

MNI...

ATG InCDS
Overlapping
sORF
Alternative
Upstream
ncRNA
Glioma, Liver, MEF,
MESC, C2C12, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
moderate 1 Johnstone2016
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 4 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
moderate 2 sORFs_org_Mouse
749900 105

ATG...

MME...

ATG Alternative
InCDS
Overlapping
sORF
ncRNA
Brain, B_cell, R1E,
3T3, E14, MEF,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 5 sORFs_org_Mouse
505085 42

GTG...

VPR...

GTG ncRNA
sORF
B_cell, MEF, R1E,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
4 sORFs_org_Mouse
752052 30

CTG...

LKI...

CTG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, R1E, 3T3,
MEF, NSC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 3 sORFs_org_Mouse
506049 60

GTG...

VYV...

GTG InCDS
Overlapping
sORF
ncRNA
3T3, E14, MEF,
NSC, v6-5, B_cell,
R1E, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 7 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
5 sORFs_org_Mouse
507132 147

GTG...

VAA...

GTG Alternative
sORF
Upstream
B_cell, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
strong 2 sORFs_org_Mouse
894413 57

ATA...

ISF...

ATA Alternative
InCDS
Overlapping
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
507817 33

GTG...

VHD...

GTG Alternative
InCDS
Overlapping
sORF
3T3, E14, MEF,
NSC, v6-5, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
7 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
1647851 84

CTG...

LTD...

CTG Intronic
sORF
ncRNA
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

505401 ENSMUST00000193694 Naa15-207 retained_intron Ribo-seq
1 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
1 sORFs_org_Mouse
506804 36

GTG...

VCK...

GTG Alternative
InCDS
Overlapping
sORF
ncRNA
E14, MEF, NSC,
v6-5, Brain, B_cell,
Liver, R1E, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 4 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
4 sORFs_org_Mouse
142236 72

ATG...

MDP...

ATG Alternative
InCDS
Overlapping
sORF
B_cell, Glioma, Liver,
MEF, MESC, Spleen_B_cell,
3T3, Brain, E14,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
3 sORFs_org_Mouse
Johnstone2016
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
5 sORFs_org_Mouse
506713 180

GTG...

VNR...

GTG Alternative
sORF
Upstream
B_cell, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
weak 2 sORFs_org_Mouse
502783 150

ATG...

MNI...

ATG ncRNA
sORF
Alternative
InCDS
Overlapping
B_cell, MEF, R1E,
Spleen_B_cell, 3T3, E14,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
4 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
5 sORFs_org_Mouse
1224365 159

AAG...

KKR...

AAG InCDS
Overlapping
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
1 sORFs_org_Mouse
1221980 87

AAG...

KKL...

AAG Alternative
InCDS
Overlapping
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
894288 54

ATT...

IKT...

ATT Alternative
InCDS
Overlapping
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
128429 33

ATG...

MDP...

ATG Alternative
InCDS
Overlapping
sORF
Intronic
R1E, 3T3, Brain,
E14, v6-5, B_cell,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
4 sORFs_org_Mouse
505370 ENSMUST00000193267 Naa15-206 retained_intron Ribo-seq
moderate 3 sORFs_org_Mouse
818834 108

CTG...

LEY...

CTG ncRNA
sORF
B_cell, Liver, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
3 sORFs_org_Mouse
52290 48

GTG...

VSS...

GTG Alternative
sORF
Upstream
3T3, v6-5, B_cell,
R1E, Spleen_B_cell, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
moderate 4 sORFs_org_Mouse
1646688 48

CTG...

LNI...

CTG Alternative
Downstream
Overlapping
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
507774 45

GTG...

VKH...

GTG Alternative
InCDS
Overlapping
sORF
E14, MEF, Neutrophil,
NSC, v6-5, B_cell,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
6 sORFs_org_Mouse
51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
2 sORFs_org_Mouse
1221995 42

TTG...

LEQ...

TTG Alternative
InCDS
Overlapping
sORF
Intronic
E14, MEF, NSC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 4 sORFs_org_Mouse
505370 ENSMUST00000193267 Naa15-206 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
893105 33

ATT...

ILV...

ATT Alternative
InCDS
Overlapping
sORF
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
894256 66

AAG...

KMY...

AAG Alternative
InCDS
Overlapping
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
543298 96

ATG...

MMT...

ATG Alternative
InCDS
Overlapping
sORF
B_cell, Brain, MEF,
R1E, 3T3, E14,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

51886 ENSMUST00000029303 Naa15-201 protein_coding Ribo-seq
4 sORFs_org_Mouse
17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
4 sORFs_org_Mouse
819694 105

TTG...

LKL...

TTG Intronic
sORF
ncRNA
MEF, Neutrophil, B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

505401 ENSMUST00000193694 Naa15-207 retained_intron Ribo-seq
2 sORFs_org_Mouse
502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
2 sORFs_org_Mouse
1223170 57

AGG...

RPW...

AGG Alternative
InCDS
Overlapping
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
1224194 135

AAG...

KKS...

AAG InCDS
Overlapping
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
1 sORFs_org_Mouse
1219027 93

AAG...

KKS...

AAG Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

138766 ENSMUST00000194685 Naa15-208 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
1173039 33

CTG...

LPL...

CTG Alternative
sORF
Upstream
MEF, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
weak 3 sORFs_org_Mouse
504904 240

GTG...

VGK...

GTG Alternative
sORF
Upstream
B_cell, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
1222565 162

ATA...

IKW...

ATA sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1218902 ENSMUST00000192197 Naa15-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
819749 75

TTG...

LLN...

TTG ncRNA
sORF
B_cell, MEF, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
4 sORFs_org_Mouse
1222763 207

ATG...

MMM...

ATG Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

138766 ENSMUST00000194685 Naa15-208 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
1221017 42

ATT...

IHC...

ATT Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

505370 ENSMUST00000193267 Naa15-206 retained_intron Ribo-seq
weak 1 sORFs_org_Mouse
1222710 117

AAG...

KFF...

AAG sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1218902 ENSMUST00000192197 Naa15-202 protein_coding Ribo-seq
1 sORFs_org_Mouse
817923 150

TTG...

LAQ...

TTG ncRNA
sORF
B_cell, Liver, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
3 sORFs_org_Mouse
1220459 159

AAG...

KKA...

AAG Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

138766 ENSMUST00000194685 Naa15-208 retained_intron Ribo-seq
weak 1 sORFs_org_Mouse
1222275 90

AAG...

KKL...

AAG InCDS
Overlapping
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1219840 36

ATA...

INK...

ATA Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

138766 ENSMUST00000194685 Naa15-208 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
504467 81

GTG...

VAI...

GTG ncRNA
sORF
B_cell, Liver, MEF,
R1E, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
6 sORFs_org_Mouse
1220457 105

ATA...

IEL...

ATA Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

505370 ENSMUST00000193267 Naa15-206 retained_intron Ribo-seq
strong 1 sORFs_org_Mouse
1218972 93

AGG...

RNL...

AGG InCDS
Overlapping
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1223906 117

ATC...

IRK...

ATC InCDS
Overlapping
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

17095 ENSMUST00000193266 Naa15-205 protein_coding Ribo-seq
1 sORFs_org_Mouse
1219777 42

ATC...

IPE...

ATC Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

138766 ENSMUST00000194685 Naa15-208 retained_intron Ribo-seq
weak 1 sORFs_org_Mouse
506877 120

TTG...

LML...

TTG ncRNA
sORF
B_cell, Liver, R1E,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
4 sORFs_org_Mouse
818303 30

TTG...

LLA...

TTG ncRNA
sORF
B_cell, Liver, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

502738 ENSMUST00000192523 Naa15-204 processed_transcript Ribo-seq
3 sORFs_org_Mouse

Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

bidirectional_promoter_lncRNA

IG_C_gene

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

pseudogene

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

3T3

B_cell

BMDC

Brain

C2C12

E14

Glioma

Liver

MEF

MESC

Neutrophil

NSC

R1E

Skin_tumor

Spleen_B_cell

Testis

v6-5