Gene NCBI:73473 | MetamORF

Gene

ID CARD

NCBI:73473

Aliases

1700069O15Rik
3000008H23, AL117927, AW214353
ENSMUSG00000024384, Iws1, MGI:1920723
NCBI:73473, OFF:Iws1

Chromosome

Transcripts

106 ORFs
7 known transcripts
250 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

1049094

ENSMUST00000212675

Iws1-206

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
712824	162	ATG ...	MGR ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
715860	210	CTG ...	LRM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
396208	219	ATG ...	MNL ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
396487	231	GTG ...	VIL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
716462	204	ATG ...	MPP ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
714916	126	ATG ...	MSQ ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
485770	60	CTG ...	LMT ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
485591	66	GTG ...	VML ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
485457	63	ATG ...	MLM ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
486125	51	CTG ...	LIV ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
486278	72	TTG ...	LSV ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
714168	222	GTG ...	VIL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
398659	297	GTG ...	VRS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
395533	63	ATG ...	MVV ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Neutrophil
485716	66	ATG ...	MMV ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Neutrophil
485296	42	ATG ...	MLY ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
395758	57	GTG ...	VQP ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Neutrophil
485129	57	ATG ...	MTL ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
485694	45	GTG ...	VML ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
484975	60	GTG ...	VVQ ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Neutrophil
393628	225	CTG ...	LKM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
393824	249	ATG ...	MQS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
397942	237	CTG ...	LLV ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
712811	228	CTG ...	LLV ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
713433	138	CTG ...	LKC ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
395993	213	CTG ...	LST ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
484661	39	TTG ...	LYR ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
712753	165	GTG ...	VMG ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
715520	249	GTG ...	VRT ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
714432	117	ATG ...	MAI ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
397182	258	CTG ...	LRS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
395862	270	GTG ...	VTL ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
716650	216	CTG ...	LKL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
394226	264	CTG ...	LTL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
715950	171	ATG ...	MTV ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF

2993483

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
716462	204	ATG ...	MPP ...	Predicted	ATG		1	Samandi2017	sORF

39502

ENSMUST00000212115

Iws1-203

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
397942	237	CTG ...	LLV ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	R1E, Spleen_B_cell, v6-5
395677	75	GTG ...	VMY ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain
393824	249	ATG ...	MQS ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
397180	111	GTG ...	VMS ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Intronic sORF	Brain, E14, Spleen_B_cell
716462	204	ATG ...	MPP ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
485694	45	GTG ...	VML ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
39501	66	GTG ...	VKI ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Testis, v6-5
394036	72	CTG ...	LTV ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	v6-5
396208	219	ATG ...	MNL ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
40210	75	TTG ...	LNN ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Intronic sORF	Brain, E14, Spleen_B_cell, Testis
394841	36	TTG ...	LLK ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Brain
715950	171	ATG ...	MTV ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
485457	63	ATG ...	MLM ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
40548	33	TTG ...	LPT ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Intronic sORF	Brain, E14, NSC, Testis, v6-5
397487	156	GTG ...	VTL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	v6-5
396892	66	CTG ...	LYK ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain
485591	66	GTG ...	VML ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
486394	33	CTG ...	LEK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
398659	297	GTG ...	VRS ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
396921	117	GTG ...	VSQ ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Spleen_B_cell
714436	84	CTG ...	LEI ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	E14
398423	189	CTG ...	LKM ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	E14, v6-5
485770	60	CTG ...	LMT ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
397188	150	CTG ...	LKR ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	R1E, v6-5
398343	102	CTG ...	LKH ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Spleen_B_cell
1199321	57	AAG ...	KGT ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Intronic sORF	E14
393897	183	ATG ...	MKS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	v6-5
40540	216	CTG ...	LSD ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Testis
486292	42	CTG ...	LVV ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
395533	63	ATG ...	MVV ...	Ribo-seq	ATG	strong	4	sORFs_org_Mouse	Intronic sORF	Brain, R1E, Spleen_B_cell, v6-5
486470	42	TTG ...	LGV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
40422	51	CTG ...	LKK ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Intronic sORF	Brain, E14, Testis, v6-5
713133	42	CTG ...	LTV ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	v6-5
484939	39	ATG ...	MGA ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
485716	66	ATG ...	MMV ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
486533	63	GTG ...	VAN ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
1197060	75	AGG ...	RRK ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
1196447	141	ATT ...	ILK ...	Ribo-seq	ATT	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
393685	54	CTG ...	LKI ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Spleen_B_cell
398196	126	ATG ...	MPP ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
40788	117	GTG ...	VTL ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	Intronic sORF	NSC, Spleen_B_cell, Testis
712928	36	GTG ...	VKK ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	NSC, v6-5
486125	51	CTG ...	LIV ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
486278	72	TTG ...	LSV ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
393219	111	CTG ...	LKL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	NSC
486483	39	GTG ...	VVR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
40436	66	GTG ...	VKK ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Intronic sORF	NSC, Spleen_B_cell, Testis, v6-5
397182	258	CTG ...	LRS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
484661	39	TTG ...	LYR ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
485129	57	ATG ...	MTL ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
715312	39	GTG ...	VTQ ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
40385	84	TTG ...	LEE ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Intronic sORF	Brain, E14, Spleen_B_cell, Testis
393628	225	CTG ...	LKM ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
394226	264	CTG ...	LTL ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	E14, Spleen_B_cell, v6-5
395862	270	GTG ...	VTL ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
484965	45	GTG ...	VWQ ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
1197912	111	ATA ...	IQT ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
395758	57	GTG ...	VQP ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	Intronic sORF	Brain, E14, Spleen_B_cell, v6-5
396947	63	TTG ...	LPA ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Spleen_B_cell
395925	201	ATG ...	MGA ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
40815	42	CTG ...	LFG ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	E14, Spleen_B_cell, Testis, v6-5
395712	162	ATG ...	MPV ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	R1E, v6-5
392776	39	GTG ...	VVS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
40397	240	GTG ...	VQN ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, Testis, v6-5
394239	105	CTG ...	LRT ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	NSC, Spleen_B_cell
395993	213	CTG ...	LST ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
1197953	39	ACG ...	TSG ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
485296	42	ATG ...	MLY ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
713088	42	TTG ...	LEN ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	v6-5
398339	168	ATG ...	MGM ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5
485308	36	GTG ...	VTV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
1198046	153	ATA ...	IRG ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
396487	231	GTG ...	VIL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	v6-5
714168	222	GTG ...	VIL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
484975	60	GTG ...	VVQ ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell, v6-5

393220

ENSMUST00000212280

Iws1-204

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
712753	165	GTG ...	VMG ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	B_cell
716462	204	ATG ...	MPP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	NMD sORF	B_cell
40436	66	GTG ...	VKK ...	Ribo-seq	GTG		2	sORFs_org_Mouse	NMD sORF	Brain, R1E
714168	222	GTG ...	VIL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	B_cell
714432	117	ATG ...	MAI ...	Ribo-seq	ATG		1	sORFs_org_Mouse	NMD sORF	B_cell
715520	249	GTG ...	VRT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	B_cell
398339	168	ATG ...	MGM ...	Ribo-seq	ATG		3	sORFs_org_Mouse	NMD sORF	B_cell, Brain, R1E
714916	126	ATG ...	MSQ ...	Ribo-seq	ATG		1	sORFs_org_Mouse	NMD sORF	B_cell
801490	114	ATG ...	MND ...	Ribo-seq	ATG		1	sORFs_org_Mouse	NMD sORF	B_cell
713433	138	CTG ...	LKC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	B_cell
393628	225	CTG ...	LKM ...	Ribo-seq	CTG		3	sORFs_org_Mouse	NMD sORF	B_cell, Brain, R1E
393897	183	ATG ...	MKS ...	Ribo-seq	ATG		2	sORFs_org_Mouse	NMD sORF	B_cell, Brain
396208	219	ATG ...	MNL ...	Ribo-seq	ATG		3	sORFs_org_Mouse	NMD sORF	B_cell, Brain, R1E
715312	39	GTG ...	VTQ ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	R1E
393219	111	CTG ...	LKL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	NMD sORF	B_cell, Brain
398659	297	GTG ...	VRS ...	Ribo-seq	GTG		3	sORFs_org_Mouse	NMD sORF	B_cell, Brain, R1E
395925	201	ATG ...	MGA ...	Ribo-seq	ATG		3	sORFs_org_Mouse	NMD sORF	B_cell, Brain, R1E
715950	171	ATG ...	MTV ...	Ribo-seq	ATG		1	sORFs_org_Mouse	NMD sORF	B_cell
398423	189	CTG ...	LKM ...	Ribo-seq	CTG		3	sORFs_org_Mouse	NMD sORF	B_cell, Brain, R1E
393824	249	ATG ...	MQS ...	Ribo-seq	ATG		3	sORFs_org_Mouse	NMD sORF	B_cell, Brain, R1E
716650	216	CTG ...	LKL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	B_cell
801255	84	CTG ...	LTA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	B_cell
802591	300	GTG ...	VTQ ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	B_cell
715860	210	CTG ...	LRM ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	B_cell
397182	258	CTG ...	LRS ...	Ribo-seq	CTG		3	sORFs_org_Mouse	NMD sORF	B_cell, Brain, R1E
801513	120	CTG ...	LGM ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	B_cell
395993	213	CTG ...	LST ...	Ribo-seq	CTG		3	sORFs_org_Mouse	NMD sORF	B_cell, Brain, R1E
40788	117	GTG ...	VTL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	NMD sORF	B_cell, Brain
394036	72	CTG ...	LTV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	NMD sORF	B_cell, Brain
394239	105	CTG ...	LRT ...	Ribo-seq	CTG		2	sORFs_org_Mouse	NMD sORF	B_cell, Brain
40815	42	CTG ...	LFG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	Brain
396487	231	GTG ...	VIL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	NMD sORF	B_cell, Brain, R1E
397942	237	CTG ...	LLV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	NMD sORF	B_cell, Brain
712811	228	CTG ...	LLV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	B_cell
395862	270	GTG ...	VTL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	NMD sORF	B_cell, Brain, R1E
394226	264	CTG ...	LTL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	NMD sORF	B_cell, Brain, R1E
712824	162	ATG ...	MGR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	NMD sORF	B_cell
40397	240	GTG ...	VQN ...	Ribo-seq	GTG		3	sORFs_org_Mouse	NMD sORF	B_cell, Brain, R1E
397487	156	GTG ...	VTL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	NMD sORF	B_cell, Brain, R1E
398196	126	ATG ...	MPP ...	Ribo-seq	ATG		2	sORFs_org_Mouse	NMD sORF	B_cell, Brain
39501	66	GTG ...	VKI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	Brain
395712	162	ATG ...	MPV ...	Ribo-seq	ATG		2	sORFs_org_Mouse	NMD sORF	B_cell, Brain
397188	150	CTG ...	LKR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	NMD sORF	B_cell, Brain

484987

ENSMUST00000025243

Iws1-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
485129	57	ATG ...	MTL ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
715520	249	GTG ...	VRT ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
713705	54	TTG ...	LQI ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
393219	111	CTG ...	LKL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
486611	60	CTG ...	LWL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Spleen_B_cell
485457	63	ATG ...	MLM ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
716650	216	CTG ...	LKL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
484661	39	TTG ...	LYR ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
484986	30	TTG ...	LAP ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	Alternative sORF Upstream	3T3, E14, Spleen_B_cell
713133	42	CTG ...	LTV ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
713433	138	CTG ...	LKC ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
398196	126	ATG ...	MPP ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
716462	204	ATG ...	MPP ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, Glioma, Liver, MEF, MESC
398339	168	ATG ...	MGM ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
397182	258	CTG ...	LRS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
485591	66	GTG ...	VML ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
1198553	69	AGG ...	RCF ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	sORF Upstream	E14
714436	84	CTG ...	LEI ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
485308	36	GTG ...	VTV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
712928	36	GTG ...	VKK ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
716648	30	GTG ...	VMK ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
397487	156	GTG ...	VTL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
39501	66	GTG ...	VKI ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
484939	39	ATG ...	MGA ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, Glioma, Liver, MEF, MESC
486292	42	CTG ...	LVV ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
712824	162	ATG ...	MGR ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
395925	201	ATG ...	MGA ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
398659	297	GTG ...	VRS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
486125	51	CTG ...	LIV ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
396487	231	GTG ...	VIL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
398423	189	CTG ...	LKM ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC
717424	99	TTG ...	LQI ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
395993	213	CTG ...	LST ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
486278	72	TTG ...	LSV ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF
394226	264	CTG ...	LTL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
394036	72	CTG ...	LTV ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
714432	117	ATG ...	MAI ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
716060	54	CTG ...	LPL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
1200101	117	AAG ...	KGT ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
485716	66	ATG ...	MMV ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, Glioma, Liver, MEF, MESC
715950	171	ATG ...	MTV ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
712753	165	GTG ...	VMG ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
397188	150	CTG ...	LKR ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
393824	249	ATG ...	MQS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
396208	219	ATG ...	MNL ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
395712	162	ATG ...	MPV ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
397942	237	CTG ...	LLV ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
40788	117	GTG ...	VTL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
395758	57	GTG ...	VQP ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF
713088	42	TTG ...	LEN ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
395533	63	ATG ...	MVV ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF
717249	87	TTG ...	LEN ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
486470	42	TTG ...	LGV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
486483	39	GTG ...	VVR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
486533	63	GTG ...	VAN ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
393628	225	CTG ...	LKM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
714168	222	GTG ...	VIL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
715312	39	GTG ...	VTQ ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
394239	105	CTG ...	LRT ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
485296	42	ATG ...	MLY ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
717200	75	GTG ...	VMK ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14
1200151	93	ATA ...	IYL ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
485694	45	GTG ...	VML ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
714916	126	ATG ...	MSQ ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
715984	33	CTG ...	LVM ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
484975	60	GTG ...	VVQ ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF
485770	60	CTG ...	LMT ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
393897	183	ATG ...	MKS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
395862	270	GTG ...	VTL ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
712811	228	CTG ...	LLV ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
715860	210	CTG ...	LRM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
718178	78	CTG ...	LVM ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
716517	30	GTG ...	VSP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3

801057

ENSMUST00000213074

Iws1-207

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1199026	48	ATA ...	IYL ...	Ribo-seq	ATA		1	sORFs_org_Mouse	NMD sORF	E14
397180	111	GTG ...	VMS ...	Ribo-seq	GTG		2	sORFs_org_Mouse	NMD sORF	B_cell, R1E
1197224	51	AAG ...	KIR ...	Ribo-seq	AAG		1	sORFs_org_Mouse	NMD sORF	E14
713088	42	TTG ...	LEN ...	Ribo-seq	TTG		1	sORFs_org_Mouse	NMD sORF	B_cell
40422	51	CTG ...	LKK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	R1E
713705	54	TTG ...	LQI ...	Ribo-seq	TTG		1	sORFs_org_Mouse	NMD sORF	B_cell
40548	33	TTG ...	LPT ...	Ribo-seq	TTG		2	sORFs_org_Mouse	NMD sORF	B_cell, R1E
396947	63	TTG ...	LPA ...	Ribo-seq	TTG		3	sORFs_org_Mouse	NMD sORF	B_cell, E14, R1E
40815	42	CTG ...	LFG ...	Ribo-seq	CTG		2	sORFs_org_Mouse	NMD sORF	B_cell, R1E
393685	54	CTG ...	LKI ...	Ribo-seq	CTG		2	sORFs_org_Mouse	NMD sORF	B_cell, R1E
40210	75	TTG ...	LNN ...	Ribo-seq	TTG		3	sORFs_org_Mouse	NMD sORF	B_cell, E14, R1E
40385	84	TTG ...	LEE ...	Ribo-seq	TTG		2	sORFs_org_Mouse	NMD sORF	B_cell, R1E
40436	66	GTG ...	VKK ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	B_cell
40540	216	CTG ...	LSD ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	B_cell
1196501	45	ATC ...	IEM ...	Ribo-seq	ATC	strong	1	sORFs_org_Mouse	NMD sORF	E14
394841	36	TTG ...	LLK ...	Ribo-seq	TTG		1	sORFs_org_Mouse	NMD sORF	R1E

802115

ENSMUST00000212458

Iws1-205

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
486292	42	CTG ...	LVV ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	sORF	B_cell, NSC, v6-5
392776	39	GTG ...	VVS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	sORF	NSC
486483	39	GTG ...	VVR ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	sORF	B_cell, NSC, v6-5

801161

ENSMUST00000212104

Iws1-202

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
395758	57	GTG ...	VQP ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	B_cell
484975	60	GTG ...	VVQ ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Intronic sORF	B_cell
801959	93	GTG ...	VGF ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
485716	66	ATG ...	MMV ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	B_cell
395533	63	ATG ...	MVV ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Intronic sORF	B_cell

ORFs

106 ORFs
7 known transcripts
250 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

712824

162

ATG...

MGR...

ATG

Alternative
InCDS
Overlapping
sORF
NMD

MEF, 3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

715860

210

CTG...

LRM...

CTG

Alternative
InCDS
Overlapping
sORF
NMD

MEF, B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

716462

204

ATG...

MPP...

ATG

sORF
Intronic
NMD
Alternative
InCDS
Overlapping

E14, B_cell,
3T3, Glioma, Liver,
MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2993483	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

397942

237

CTG...

LLV...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD

R1E, Spleen_B_cell, v6-5,
3T3, MEF, B_cell,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

712753

165

GTG...

VMG...

GTG

NMD
sORF
Alternative
InCDS
Overlapping

B_cell, 3T3, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

395677

GTG...

VMY...

GTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

393824

249

ATG...

MQS...

ATG

Intronic
sORF
NMD
Alternative
InCDS
Overlapping

Spleen_B_cell, v6-5, B_cell,
Brain, R1E, 3T3,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

397180

111

GTG...

VMS...

GTG

Intronic
sORF
NMD

Brain, E14, Spleen_B_cell,
B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		4	sORFs_org_Mouse
801057	ENSMUST00000213074	Iws1-207	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

485129

ATG...

MTL...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic

MEF, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

715520

249

GTG...

VRT...

GTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

485694

GTG...

VML...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping

Spleen_B_cell, v6-5, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

39501

GTG...

VKI...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD

Testis, v6-5, 3T3,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

394036

CTG...

LTV...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD

v6-5, 3T3, B_cell,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

396208

219

ATG...

MNL...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic
NMD

MEF, Spleen_B_cell, v6-5,
B_cell, Brain, R1E,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

40210

TTG...

LNN...

TTG

Intronic
sORF
NMD

Brain, E14, Spleen_B_cell,
Testis, B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		5	sORFs_org_Mouse
801057	ENSMUST00000213074	Iws1-207	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

713705

TTG...

LQI...

TTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
801057	ENSMUST00000213074	Iws1-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

394841

TTG...

LLK...

TTG

Intronic
sORF
NMD

Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
801057	ENSMUST00000213074	Iws1-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1199026

ATA...

IYL...

ATA

NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
801057	ENSMUST00000213074	Iws1-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

40436

GTG...

VKK...

GTG

NMD
sORF
Intronic

Brain, R1E, B_cell,
NSC, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
801057	ENSMUST00000213074	Iws1-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		4	sORFs_org_Mouse

715950

171

ATG...

MTV...

ATG

Intronic
sORF
NMD
Alternative
InCDS
Overlapping

E14, B_cell, 3T3,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

485457

ATG...

MLM...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping

Spleen_B_cell, v6-5, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

393219

111

CTG...

LKL...

CTG

Alternative
InCDS
Overlapping
sORF
NMD
Intronic

3T3, B_cell, Brain,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

40548

TTG...

LPT...

TTG

Intronic
sORF
NMD

Brain, E14, NSC,
Testis, v6-5, B_cell,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		6	sORFs_org_Mouse
801057	ENSMUST00000213074	Iws1-207	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

486611

CTG...

LWL...

CTG

InCDS
Overlapping
sORF

3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

714168

222

GTG...

VIL...

GTG

NMD
sORF
Alternative
InCDS
Overlapping
Intronic

B_cell, MEF, 3T3,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

714432

117

ATG...

MAI...

ATG

NMD
sORF
Alternative
InCDS
Overlapping

B_cell, 3T3, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

397487

156

GTG...

VTL...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD

v6-5, 3T3, B_cell,
Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

716650

216

CTG...

LKL...

CTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

484661

TTG...

LYR...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic

MEF, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

484986

TTG...

LAP...

TTG

Alternative
sORF
Upstream

3T3, E14, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse

713133

CTG...

LTV...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

3T3, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

396892

CTG...

LYK...

CTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

713433

138

CTG...

LKC...

CTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

485591

GTG...

VML...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping

Spleen_B_cell, v6-5, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

398196

126

ATG...

MPP...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic
NMD

3T3, Spleen_B_cell, v6-5,
B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

486394

CTG...

LEK...

CTG

Intronic
sORF

Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

396487

231

GTG...

VIL...

GTG

Alternative
InCDS
Overlapping
sORF
NMD
Intronic

MEF, 3T3, B_cell,
Brain, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

398659

297

GTG...

VRS...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD

Spleen_B_cell, v6-5, MEF,
3T3, B_cell, Brain,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

396921

117

GTG...

VSQ...

GTG

Intronic
sORF

Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

714436

CTG...

LEI...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping

E14, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

398339

168

ATG...

MGM...

ATG

Alternative
InCDS
Overlapping
sORF
NMD
Intronic

3T3, B_cell, Brain,
R1E, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

397182

258

CTG...

LRS...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic
NMD

3T3, Spleen_B_cell, v6-5,
B_cell, Brain, R1E,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

398423

189

CTG...

LKM...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD

E14, v6-5, 3T3,
BMDC, B_cell, Brain,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

485770

CTG...

LMT...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping

Spleen_B_cell, v6-5, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

397188

150

CTG...

LKR...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD

R1E, v6-5, 3T3,
B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

398343

102

CTG...

LKH...

CTG

Intronic
sORF

Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1199321

AAG...

KGT...

AAG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

393897

183

ATG...

MKS...

ATG

Intronic
sORF
NMD
Alternative
InCDS
Overlapping

v6-5, B_cell, Brain,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

714916

126

ATG...

MSQ...

ATG

NMD
sORF
Alternative
InCDS
Overlapping

B_cell, MEF, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

801490

114

ATG...

MND...

ATG

NMD
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1198553

AGG...

RCF...

AGG

sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

486292

CTG...

LVV...

CTG

sORF
Intronic
InCDS
Overlapping

B_cell, NSC, v6-5,
Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
802115	ENSMUST00000212458	Iws1-205	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

40540

216

CTG...

LSD...

CTG

Intronic
sORF
NMD

Testis, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
801057	ENSMUST00000213074	Iws1-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

395533

ATG...

MVV...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping

Brain, R1E, Spleen_B_cell,
v6-5, Neutrophil, 3T3,
MEF, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	strong	4	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
801161	ENSMUST00000212104	Iws1-202	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

393628

225

CTG...

LKM...

CTG

NMD
sORF
Alternative
InCDS
Overlapping
Intronic

B_cell, Brain, R1E,
MEF, Spleen_B_cell, v6-5,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

485308

GTG...

VTV...

GTG

Alternative
InCDS
Overlapping
sORF
Intronic

3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

712928

GTG...

VKK...

GTG

Alternative
InCDS
Overlapping
sORF
Intronic

3T3, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

486125

CTG...

LIV...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

MEF, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

1197224

AAG...

KIR...

AAG

NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
801057	ENSMUST00000213074	Iws1-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

486278

TTG...

LSV...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic

MEF, 3T3, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

716648

GTG...

VMK...

GTG

Alternative
InCDS
Overlapping
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

486470

TTG...

LGV...

TTG

Intronic
sORF
Alternative
InCDS
Overlapping

Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

40422

CTG...

LKK...

CTG

Intronic
sORF
NMD

Brain, E14, Testis,
v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		5	sORFs_org_Mouse
801057	ENSMUST00000213074	Iws1-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

392776

GTG...

VVS...

GTG

sORF
Intronic

NSC, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
802115	ENSMUST00000212458	Iws1-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

484939

ATG...

MGA...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping

Spleen_B_cell, v6-5, 3T3,
Glioma, Liver, MEF,
MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse Johnstone2016

713088

TTG...

LEN...

TTG

NMD
sORF
Alternative
InCDS
Overlapping
Intronic

B_cell, 3T3, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
801057	ENSMUST00000213074	Iws1-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

395758

GTG...

VQP...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping

B_cell, Neutrophil, 3T3,
MEF, Brain, E14,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
801161	ENSMUST00000212104	Iws1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse

715312

GTG...

VTQ...

GTG

NMD
sORF
Intronic
Alternative
InCDS
Overlapping

R1E, E14, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

485716

ATG...

MMV...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping

Spleen_B_cell, v6-5, Neutrophil,
3T3, Glioma, Liver,
MEF, MESC, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse Johnstone2016
801161	ENSMUST00000212104	Iws1-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

486533

GTG...

VAN...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping

Spleen_B_cell, v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

395925

201

ATG...

MGA...

ATG

Alternative
InCDS
Overlapping
sORF
NMD
Intronic

3T3, B_cell, Brain,
R1E, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse

1197060

AGG...

RRK...

AGG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1196447

141

ATT...

ILK...

ATT

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

396947

TTG...

LPA...

TTG

NMD
sORF
Intronic

B_cell, E14, R1E,
Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
801057	ENSMUST00000213074	Iws1-207	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

486483

GTG...

VVR...

GTG

sORF
Intronic
InCDS
Overlapping

B_cell, NSC, v6-5,
Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
802115	ENSMUST00000212458	Iws1-205	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

393685

CTG...

LKI...

CTG

Intronic
sORF
NMD

Brain, Spleen_B_cell, B_cell,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
801057	ENSMUST00000213074	Iws1-207	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

40788

117

GTG...

VTL...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD

NSC, Spleen_B_cell, Testis,
3T3, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

40815

CTG...

LFG...

CTG

NMD
sORF
Intronic

B_cell, R1E, Brain,
E14, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
801057	ENSMUST00000213074	Iws1-207	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		4	sORFs_org_Mouse

484975

GTG...

VVQ...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping

B_cell, Neutrophil, 3T3,
MEF, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
801161	ENSMUST00000212104	Iws1-202	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse

717424

TTG...

LQI...

TTG

Alternative
InCDS
Overlapping
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

395993

213

CTG...

LST...

CTG

Alternative
InCDS
Overlapping
sORF
NMD
Intronic

3T3, B_cell, Brain,
R1E, MEF, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

485296

ATG...

MLY...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic

MEF, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

394226

264

CTG...

LTL...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic
NMD

3T3, E14, Spleen_B_cell,
v6-5, B_cell, Brain,
R1E, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

716060

CTG...

LPL...

CTG

Alternative
InCDS
Overlapping
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1200101

117

AAG...

KGT...

AAG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

40385

TTG...

LEE...

TTG

NMD
sORF
Intronic

B_cell, R1E, Brain,
E14, Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
801057	ENSMUST00000213074	Iws1-207	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		4	sORFs_org_Mouse

801959

GTG...

VGF...

GTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
801161	ENSMUST00000212104	Iws1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

801255

CTG...

LTA...

CTG

NMD
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

802591

300

GTG...

VTQ...

GTG

NMD
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

395862

270

GTG...

VTL...

GTG

Intronic
sORF
NMD
Alternative
InCDS
Overlapping

Spleen_B_cell, v6-5, B_cell,
Brain, R1E, MEF,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

395712

162

ATG...

MPV...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic
NMD

3T3, R1E, v6-5,
B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

484965

GTG...

VWQ...

GTG

Intronic
sORF

Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

801513

120

CTG...

LGM...

CTG

NMD
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1197912

111

ATA...

IQT...

ATA

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

717249

TTG...

LEN...

TTG

Alternative
InCDS
Overlapping
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

394239

105

CTG...

LRT...

CTG

NMD
sORF
Intronic
Alternative
InCDS
Overlapping

B_cell, Brain, NSC,
Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

712811

228

CTG...

LLV...

CTG

Alternative
InCDS
Overlapping
sORF
NMD

MEF, B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1049094	ENSMUST00000212675	Iws1-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

40397

240

GTG...

VQN...

GTG

Intronic
sORF
NMD

Spleen_B_cell, Testis, v6-5,
B_cell, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq		3	sORFs_org_Mouse
393220	ENSMUST00000212280	Iws1-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

1196501

ATC...

IEM...

ATC

NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
801057	ENSMUST00000213074	Iws1-207	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

1197953

ACG...

TSG...

ACG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

717200

GTG...

VMK...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1200151

ATA...

IYL...

ATA

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

715984

CTG...

LVM...

CTG

Alternative
InCDS
Overlapping
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1198046

153

ATA...

IRG...

ATA

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39502	ENSMUST00000212115	Iws1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

718178

CTG...

LVM...

CTG

Alternative
InCDS
Overlapping
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

716517

GTG...

VSP...

GTG

Alternative
InCDS
Overlapping
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
484987	ENSMUST00000025243	Iws1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

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