Gene NCBI:69125 | MetamORF

Gene

ID CARD

NCBI:69125

Aliases

1500015I04Rik
1810022F04Rik, AA536816, AU015770
AU043059, Cnot8, ENSMUSG00000020515
MGI:1916375, NCBI:69125, OFF:Cnot8

Chromosome

Transcripts

30 ORFs
4 known transcripts
65 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

303247

ENSMUST00000020822

Cnot8-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
307176	90	TTG ...	LFF ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	v6-5
293945	33	TTG ...	LSS ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver, v6-5
312672	93	GTG ...	VRL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, v6-5
774484	63	CTG ...	LIS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
319639	117	TTG ...	LRK ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, v6-5
311455	42	GTG ...	VLL ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, E14, v6-5
314208	138	GTG ...	VRC ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, v6-5
305345	39	GTG ...	VRL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver, v6-5
293576	42	CTG ...	LES ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, Brain, v6-5
653728	60	TTG ...	LDP ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	sORF Upstream	v6-5
293679	30	GTG ...	VPS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Liver
769488	108	ATG ...	MLI ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	B_cell, Glioma, Liver, MEF, MESC, v6-5
769021	63	ATG ...	MRR ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, v6-5
771538	105	TTG ...	LIF ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, v6-5
294192	63	TTG ...	LRK ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver, v6-5
651352	51	GTG ...	VWT ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	sORF Upstream	v6-5
301227	72	TTG ...	LFV ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF, v6-5
453085	84	GTG ...	VRC ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
303246	36	TTG ...	LYG ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, E14, v6-5
20319	42	GTG ...	VAP ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Liver
320013	87	TTG ...	LSS ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, v6-5
305588	39	TTG ...	LLY ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	v6-5

20320

ENSMUST00000108843

Cnot8-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
769021	63	ATG ...	MRR ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF
305588	39	TTG ...	LLY ...	Ribo-seq	TTG	moderate	6	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14, MEF, Spleen_B_cell
307176	90	TTG ...	LFF ...	Ribo-seq	TTG	weak	7	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC, Brain, MEF, Neutrophil, Spleen_B_cell
20319	42	GTG ...	VAP ...	Ribo-seq	GTG	strong	10	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, Spleen_B_cell, Testis
932138	108	ATC ...	IQC ...	Ribo-seq	ATC	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC
774484	63	CTG ...	LIS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
314208	138	GTG ...	VRC ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, MEF, Neutrophil, R1E, Spleen_B_cell
319639	117	TTG ...	LRK ...	Ribo-seq	TTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, Neutrophil, R1E, Spleen_B_cell
301227	72	TTG ...	LFV ...	Ribo-seq	TTG	moderate	6	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Liver, MEF, Neutrophil, Spleen_B_cell
294192	63	TTG ...	LRK ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, NSC, Spleen_B_cell
935010	135	ATT ...	ITS ...	Ribo-seq	ATT	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
312672	93	GTG ...	VRL ...	Ribo-seq	GTG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, Neutrophil, R1E, Spleen_B_cell
653728	60	TTG ...	LDP ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	sORF Upstream	MEF
303246	36	TTG ...	LYG ...	Ribo-seq	TTG	weak	4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell
293679	30	GTG ...	VPS ...	Ribo-seq	GTG	weak	7	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, E14, Liver, MEF, Neutrophil, NSC, Spleen_B_cell
311455	42	GTG ...	VLL ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, Spleen_B_cell
1286014	42	AGG ...	RKG ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
307565	78	TTG ...	LQT ...	Ribo-seq	TTG	weak	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, R1E, Spleen_B_cell
305345	39	GTG ...	VRL ...	Ribo-seq	GTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, Spleen_B_cell
651352	51	GTG ...	VWT ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	sORF Upstream	MEF
320013	87	TTG ...	LSS ...	Ribo-seq	TTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, Neutrophil, R1E, Spleen_B_cell
293945	33	TTG ...	LSS ...	Ribo-seq	TTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, NSC, Spleen_B_cell
453085	84	GTG ...	VRC ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Spleen_B_cell
293576	42	CTG ...	LES ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14, MEF, R1E

640870

ENSMUST00000134896

Cnot8-204

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
20319	42	GTG ...	VAP ...	Ribo-seq	GTG	strong	6	sORFs_org_Mouse	sORF	3T3, B_cell, Brain, E14, MEF, R1E
307176	90	TTG ...	LFF ...	Ribo-seq	TTG	weak	5	sORFs_org_Mouse	sORF	3T3, B_cell, Brain, E14, R1E
1285306	54	AGG ...	RCL ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	sORF	E14
294192	63	TTG ...	LRK ...	Ribo-seq	TTG		3	sORFs_org_Mouse	sORF	B_cell, Brain, R1E
1287817	78	ATA ...	IVG ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	sORF	E14
771538	105	TTG ...	LIF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	E14
311455	42	GTG ...	VLL ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	sORF	3T3, Brain, R1E
303246	36	TTG ...	LYG ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	sORF	Brain, R1E
305345	39	GTG ...	VRL ...	Ribo-seq	GTG		5	sORFs_org_Mouse	sORF	3T3, B_cell, Brain, E14, R1E
657978	78	TTG ...	LLG ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	3T3, B_cell
293945	33	TTG ...	LSS ...	Ribo-seq	TTG		3	sORFs_org_Mouse	sORF	B_cell, Brain, R1E
293679	30	GTG ...	VPS ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	sORF	3T3, B_cell, MEF, R1E
305588	39	TTG ...	LLY ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	sORF	Brain, R1E
1289364	111	ATC ...	IKQ ...	Ribo-seq	ATC	weak	1	sORFs_org_Mouse	sORF	E14
653728	60	TTG ...	LDP ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	sORF	3T3, B_cell, E14
453085	84	GTG ...	VRC ...	Ribo-seq	GTG		4	sORFs_org_Mouse	sORF	3T3, B_cell, Brain, R1E
651352	51	GTG ...	VWT ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	sORF	3T3, B_cell
301227	72	TTG ...	LFV ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	sORF	3T3, B_cell, E14, MEF, R1E

929848

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
769488	108	ATG ...	MLI ...	Predicted	ATG		1	Samandi2017	sORF

1703333

ENSMUST00000133923

Cnot8-203

processed_transcript

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

774484

CTG ...

LIS ...

Ribo-seq

CTG

weak

sORFs_org_Mouse

MEF

ORFs

30 ORFs
4 known transcripts
65 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

307176

TTG...

LFF...

TTG

Alternative
Overlapping
sORF
Upstream

v6-5, BMDC, Brain,
MEF, Neutrophil, Spleen_B_cell,
3T3, B_cell, E14,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq	weak	7	sORFs_org_Mouse
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse

293945

TTG...

LSS...

TTG

Alternative
InCDS
Overlapping
sORF

Liver, v6-5, B_cell,
Brain, R1E, 3T3,
E14, MEF, NSC,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq		3	sORFs_org_Mouse
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq		7	sORFs_org_Mouse

312672

GTG...

VRL...

GTG

Alternative
InCDS
Overlapping
sORF

B_cell, Brain, v6-5,
3T3, E14, MEF,
Neutrophil, R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq		10	sORFs_org_Mouse

769021

ATG...

MRR...

ATG

InCDS
Overlapping
sORF

E14, MEF, B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

305588

TTG...

LLY...

TTG

InCDS
Overlapping
sORF

3T3, Brain, E14,
MEF, Spleen_B_cell, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

20319

GTG...

VAP...

GTG

Alternative
Overlapping
sORF
Upstream

BMDC, Brain, E14,
Liver, MEF, Neutrophil,
NSC, Spleen_B_cell, Testis,
3T3, B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq	strong	10	sORFs_org_Mouse
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq	strong	6	sORFs_org_Mouse
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

774484

CTG...

LIS...

CTG

InCDS
Overlapping
sORF
ncRNA

B_cell, R1E, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
1703333	ENSMUST00000133923	Cnot8-203	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

932138

108

ATC...

IQC...

ATC

Alternative
Overlapping
sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

319639

117

TTG...

LRK...

TTG

Alternative
InCDS
Overlapping
sORF

B_cell, Brain, v6-5,
3T3, E14, MEF,
Neutrophil, R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq		7	sORFs_org_Mouse

314208

138

GTG...

VRC...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, MEF,
Neutrophil, R1E, Spleen_B_cell,
B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq		6	sORFs_org_Mouse
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

311455

GTG...

VLL...

GTG

InCDS
Overlapping
sORF

Brain, E14, v6-5,
3T3, R1E, MEF,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

305345

GTG...

VRL...

GTG

Alternative
InCDS
Overlapping
sORF

Liver, v6-5, 3T3,
B_cell, Brain, E14,
R1E, MEF, Neutrophil,
NSC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq		5	sORFs_org_Mouse
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq		9	sORFs_org_Mouse

301227

TTG...

LFV...

TTG

Alternative
Overlapping
sORF
Upstream

Brain, Liver, MEF,
Neutrophil, Spleen_B_cell, v6-5,
3T3, B_cell, E14,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse

293576

CTG...

LES...

CTG

InCDS
Overlapping
sORF

B_cell, Brain, v6-5,
3T3, E14, MEF,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse

294192

TTG...

LRK...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, E14,
MEF, NSC, Spleen_B_cell,
B_cell, R1E, Liver,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq		6	sORFs_org_Mouse
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq		3	sORFs_org_Mouse
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

935010

135

ATT...

ITS...

ATT

InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

653728

TTG...

LDP...

TTG

sORF
Upstream

MEF, v6-5, 3T3,
B_cell, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse

303246

TTG...

LYG...

TTG

InCDS
Overlapping
sORF

3T3, MEF, Spleen_B_cell,
Brain, R1E, E14,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse

1285306

AGG...

RCL...

AGG

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

293679

GTG...

VPS...

GTG

Alternative
Overlapping
sORF
Upstream

Liver, Brain, E14,
MEF, Neutrophil, NSC,
Spleen_B_cell, 3T3, B_cell,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq	weak	7	sORFs_org_Mouse
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse

769488

108

ATG...

MLI...

ATG

InCDS
Overlapping
sORF

B_cell, Glioma, Liver,
MEF, MESC, v6-5,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse Johnstone2016
929848	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

1287817

ATA...

IVG...

ATA

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

771538

105

TTG...

LIF...

TTG

InCDS
Overlapping
sORF

B_cell, v6-5, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

651352

GTG...

VWT...

GTG

sORF
Upstream

v6-5, MEF, 3T3,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

453085

GTG...

VRC...

GTG

Alternative
InCDS
Overlapping
sORF

v6-5, 3T3, B_cell,
Brain, R1E, MEF,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq		4	sORFs_org_Mouse
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1286014

AGG...

RKG...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

320013

TTG...

LSS...

TTG

Alternative
InCDS
Overlapping
sORF

B_cell, Brain, v6-5,
3T3, E14, MEF,
Neutrophil, R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303247	ENSMUST00000020822	Cnot8-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq		8	sORFs_org_Mouse

657978

TTG...

LLG...

TTG

sORF

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse

307565

TTG...

LQT...

TTG

Alternative
InCDS
Overlapping
sORF

Brain, E14, R1E,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
20320	ENSMUST00000108843	Cnot8-202	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse

1289364

111

ATC...

IKQ...

ATC

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
640870	ENSMUST00000134896	Cnot8-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

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