Gene NCBI:68475 | MetamORF

Gene

ID CARD

NCBI:68475

Aliases

1110003H09Rik
1190004J23Rik, AA934184, ENSMUSG00000026966
MGI:1915725, N14, NA14
NCBI:68475, OFF:Ssna1, Ssna1

Chromosome

Transcripts

39 ORFs
4 known transcripts
68 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

49621

ENSMUST00000141470

Ssna1-204

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
106498	105	CTG ...	LES ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, BMDC
498855	54	CTG ...	LTK ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, BMDC, E14
50958	297	TTG ...	LCQ ...	Ribo-seq	TTG		4	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver, Testis
45109	51	GTG ...	VPA ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell
49620	180	CTG ...	LAR ...	Ribo-seq	CTG		4	sORFs_org_Mouse	ncRNA sORF	3T3, Brain, Liver, Testis
499220	87	CTG ...	LLS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell
1217335	219	AGG ...	RQL ...	Ribo-seq	AGG		1	sORFs_org_Mouse	ncRNA sORF	E14
1211850	156	AGG ...	RQL ...	Ribo-seq	AGG		1	sORFs_org_Mouse	ncRNA sORF	E14
1217668	243	AAG ...	KQR ...	Ribo-seq	AAG		1	sORFs_org_Mouse	ncRNA sORF	E14
116153	234	TTG ...	LCQ ...	Ribo-seq	TTG		2	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell
48735	72	GTG ...	VSE ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell
50857	201	TTG ...	LAR ...	Ribo-seq	TTG		6	sORFs_org_Mouse	ncRNA sORF	3T3, BMDC, Brain, Liver, Testis
109162	159	GTG ...	VRQ ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell
100764	285	CTG ...	LQN ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	3T3, MEF
111807	189	ATG ...	MPH ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	ncRNA sORF	3T3
1210310	84	AAG ...	KPQ ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	ncRNA sORF	E14
109786	195	GTG ...	VDM ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	3T3
97618	264	TTG ...	LVK ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	ncRNA sORF	3T3, MEF
1211846	180	AAG ...	KQR ...	Ribo-seq	AAG		1	sORFs_org_Mouse	ncRNA sORF	E14
51202	222	GTG ...	VRQ ...	Ribo-seq	GTG		6	sORFs_org_Mouse	ncRNA sORF	3T3, BMDC, Brain, Liver, Testis
494397	96	GTG ...	VQA ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell
113132	213	CTG ...	LCR ...	Ribo-seq	CTG		4	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, E14, MEF
739682	30	GTG ...	VYS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell
51572	276	CTG ...	LCR ...	Ribo-seq	CTG		8	sORFs_org_Mouse	ncRNA sORF	3T3, BMDC, Brain, E14, Liver, MEF, Testis

49960

ENSMUST00000127176

Ssna1-202

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
45109	51	GTG ...	VPA ...	Ribo-seq	GTG	moderate	6	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, NSC, v6-5
494397	96	GTG ...	VQA ...	Ribo-seq	GTG		3	sORFs_org_Mouse	ncRNA sORF	MEF, Neutrophil
109162	159	GTG ...	VRQ ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, Neutrophil
50381	276	CTG ...	LQN ...	Ribo-seq	CTG		17	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, R1E, Spleen_B_cell, Testis, v6-5
100764	285	CTG ...	LQN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Brain
113132	213	CTG ...	LCR ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	ncRNA sORF	E14, MEF, Neutrophil
109786	195	GTG ...	VDM ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	Brain
116153	234	TTG ...	LCQ ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, Neutrophil
111807	189	ATG ...	MPH ...	Ribo-seq	ATG		1	sORFs_org_Mouse	ncRNA sORF	Brain
110156	240	CTG ...	LKA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Brain
493717	138	TTG ...	LAR ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	ncRNA sORF	E14
49959	255	TTG ...	LVK ...	Ribo-seq	TTG		14	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, BMDC, Brain, E14, MEF, Neutrophil, R1E, Spleen_B_cell, Testis, v6-5
970991	249	AAG ...	KCI ...	Ribo-seq	AAG		1	sORFs_org_Mouse	ncRNA sORF	BMDC
48735	72	GTG ...	VSE ...	Ribo-seq	GTG	moderate	5	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, v6-5

45110

ENSMUST00000028342

Ssna1-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
412914	105	ACG ...	TSW ...	Ribo-seq	ACG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, C2C12, E14, MEF
45109	51	GTG ...	VPA ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	R1E, Testis
48735	72	GTG ...	VSE ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, R1E, Testis
1875230	57	GTG ...	VEA ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	R1E
112572	105	GTG ...	VAY ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Downstream sORF	Brain, R1E
964301	39	ATG ...	MSF ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Downstream sORF	BMDC, R1E
746947	99	TTG ...	LTG ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, E14, MEF, R1E
101592	120	GTG ...	VPV ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	Downstream sORF	Brain, R1E, v6-5
739682	30	GTG ...	VYS ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, R1E
494397	96	GTG ...	VQA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF
1876640	51	ATG ...	MEE ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	Alternative Downstream sORF	Glioma, Liver, MEF, MESC, R1E
1875775	42	GTG ...	VFP ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream sORF	R1E
114616	78	ATG ...	MSV ...	Ribo-seq	ATG	moderate	5	sORFs_org_Mouse Johnstone2016	Downstream sORF	BMDC, Brain, Glioma, Liver, MEF, MESC, R1E, v6-5

97619

ENSMUST00000133697

Ssna1-203

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
50958	297	TTG ...	LCQ ...	Ribo-seq	TTG		9	sORFs_org_Mouse	ncRNA sORF	3T3, BMDC, C2C12, E14, MEF, Neutrophil, R1E, Spleen_B_cell, v6-5
51572	276	CTG ...	LCR ...	Ribo-seq	CTG		10	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, Brain, E14, MEF, Neutrophil, R1E, Spleen_B_cell, v6-5
499220	87	CTG ...	LLS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell
45109	51	GTG ...	VPA ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell
113132	213	CTG ...	LCR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, Spleen_B_cell
106498	105	CTG ...	LES ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	ncRNA sORF	Brain, Spleen_B_cell
48735	72	GTG ...	VSE ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell
97618	264	TTG ...	LVK ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	Brain
501329	171	GTG ...	VQA ...	Ribo-seq	GTG		4	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, MEF, Spleen_B_cell
494397	96	GTG ...	VQA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell
498855	54	CTG ...	LTK ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell
109162	159	GTG ...	VRQ ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, Spleen_B_cell
493717	138	TTG ...	LAR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell
116153	234	TTG ...	LCQ ...	Ribo-seq	TTG		2	sORFs_org_Mouse	ncRNA sORF	C2C12, Spleen_B_cell
51202	222	GTG ...	VRQ ...	Ribo-seq	GTG		8	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, Neutrophil, R1E, Spleen_B_cell, v6-5
49620	180	CTG ...	LAR ...	Ribo-seq	CTG		11	sORFs_org_Mouse	ncRNA sORF	B_cell, BMDC, Brain, E14, MEF, Neutrophil, R1E, Spleen_B_cell, v6-5
50857	201	TTG ...	LAR ...	Ribo-seq	TTG		9	sORFs_org_Mouse	ncRNA sORF	B_cell, E14, MEF, Neutrophil, R1E, Spleen_B_cell, v6-5

ORFs

39 ORFs
4 known transcripts
68 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

106498

105

CTG...

LES...

CTG

ncRNA
sORF

3T3, B_cell, BMDC,
Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq	strong	3	sORFs_org_Mouse
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq	strong	2	sORFs_org_Mouse

45109

GTG...

VPA...

GTG

ncRNA
sORF
InCDS
Overlapping

Brain, E14, MEF,
NSC, v6-5, R1E,
Testis, 3T3, B_cell,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49960	ENSMUST00000127176	Ssna1-202	processed_transcript	Ribo-seq	moderate	6	sORFs_org_Mouse
45110	ENSMUST00000028342	Ssna1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

498855

CTG...

LTK...

CTG

ncRNA
sORF

3T3, B_cell, BMDC,
E14, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq	moderate	4	sORFs_org_Mouse
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

50958

297

TTG...

LCQ...

TTG

ncRNA
sORF

B_cell, Brain, Liver,
Testis, 3T3, BMDC,
C2C12, E14, MEF,
Neutrophil, R1E, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq		4	sORFs_org_Mouse
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

412914

105

ACG...

TSW...

ACG

Alternative
InCDS
Overlapping
sORF

BMDC, C2C12, E14,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
45110	ENSMUST00000028342	Ssna1-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

48735

GTG...

VSE...

GTG

InCDS
Overlapping
sORF
ncRNA

Brain, R1E, Testis,
Spleen_B_cell, 3T3, B_cell,
E14, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
45110	ENSMUST00000028342	Ssna1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse
49960	ENSMUST00000127176	Ssna1-202	processed_transcript	Ribo-seq	moderate	5	sORFs_org_Mouse

49620

180

CTG...

LAR...

CTG

ncRNA
sORF

3T3, Brain, Liver,
Testis, B_cell, BMDC,
E14, MEF, Neutrophil,
R1E, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq		4	sORFs_org_Mouse
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq		11	sORFs_org_Mouse

51572

276

CTG...

LCR...

CTG

ncRNA
sORF

B_cell, BMDC, Brain,
E14, MEF, Neutrophil,
R1E, Spleen_B_cell, v6-5,
3T3, Liver, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq		10	sORFs_org_Mouse
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq		8	sORFs_org_Mouse

499220

CTG...

LLS...

CTG

ncRNA
sORF

Spleen_B_cell, 3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse

1217335

219

AGG...

RQL...

AGG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1875230

GTG...

VEA...

GTG

Alternative
Downstream
Overlapping
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
45110	ENSMUST00000028342	Ssna1-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

494397

GTG...

VQA...

GTG

ncRNA
sORF
Alternative
Overlapping
Upstream

MEF, Neutrophil, Spleen_B_cell,
3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49960	ENSMUST00000127176	Ssna1-202	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
45110	ENSMUST00000028342	Ssna1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse

1211850

156

AGG...

RQL...

AGG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

113132

213

CTG...

LCR...

CTG

ncRNA
sORF

Brain, Spleen_B_cell, E14,
MEF, Neutrophil, 3T3,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
49960	ENSMUST00000127176	Ssna1-202	processed_transcript	Ribo-seq	moderate	3	sORFs_org_Mouse
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq		4	sORFs_org_Mouse

109162

159

GTG...

VRQ...

GTG

ncRNA
sORF

Brain, E14, MEF,
Neutrophil, Spleen_B_cell, 3T3,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49960	ENSMUST00000127176	Ssna1-202	processed_transcript	Ribo-seq	moderate	4	sORFs_org_Mouse
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

50381

276

CTG...

LQN...

CTG

ncRNA
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, R1E,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49960	ENSMUST00000127176	Ssna1-202	processed_transcript	Ribo-seq		17	sORFs_org_Mouse

1217668

243

AAG...

KQR...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

97618

264

TTG...

LVK...

TTG

ncRNA
sORF

Brain, 3T3, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq	strong	2	sORFs_org_Mouse

100764

285

CTG...

LQN...

CTG

ncRNA
sORF

Brain, 3T3, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49960	ENSMUST00000127176	Ssna1-202	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse

112572

105

GTG...

VAY...

GTG

Downstream
sORF

Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
45110	ENSMUST00000028342	Ssna1-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

501329

171

GTG...

VQA...

GTG

ncRNA
sORF

3T3, B_cell, MEF,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq		4	sORFs_org_Mouse

109786

195

GTG...

VDM...

GTG

ncRNA
sORF

Brain, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49960	ENSMUST00000127176	Ssna1-202	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

964301

ATG...

MSF...

ATG

Downstream
sORF

BMDC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
45110	ENSMUST00000028342	Ssna1-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

746947

TTG...

LTG...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, E14,
MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
45110	ENSMUST00000028342	Ssna1-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

116153

234

TTG...

LCQ...

TTG

ncRNA
sORF

3T3, B_cell, Brain,
E14, MEF, Neutrophil,
C2C12, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
49960	ENSMUST00000127176	Ssna1-202	processed_transcript	Ribo-seq	moderate	4	sORFs_org_Mouse
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

101592

120

GTG...

VPV...

GTG

Downstream
sORF

Brain, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
45110	ENSMUST00000028342	Ssna1-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse

50857

201

TTG...

LAR...

TTG

ncRNA
sORF

3T3, BMDC, Brain,
Liver, Testis, B_cell,
E14, MEF, Neutrophil,
R1E, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq		6	sORFs_org_Mouse
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

739682

GTG...

VYS...

GTG

Alternative
InCDS
Overlapping
sORF
ncRNA

E14, MEF, R1E,
3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
45110	ENSMUST00000028342	Ssna1-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse

111807

189

ATG...

MPH...

ATG

ncRNA
sORF

Brain, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49960	ENSMUST00000127176	Ssna1-202	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

110156

240

CTG...

LKA...

CTG

ncRNA
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49960	ENSMUST00000127176	Ssna1-202	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

493717

138

TTG...

LAR...

TTG

ncRNA
sORF

E14, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49960	ENSMUST00000127176	Ssna1-202	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

49959

255

TTG...

LVK...

TTG

ncRNA
sORF

3T3, B_cell, BMDC,
Brain, E14, MEF,
Neutrophil, R1E, Spleen_B_cell,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49960	ENSMUST00000127176	Ssna1-202	processed_transcript	Ribo-seq		14	sORFs_org_Mouse

1210310

AAG...

KPQ...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

1211846

180

AAG...

KQR...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

51202

222

GTG...

VRQ...

GTG

ncRNA
sORF

3T3, BMDC, Brain,
Liver, Testis, B_cell,
E14, MEF, Neutrophil,
R1E, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49621	ENSMUST00000141470	Ssna1-204	processed_transcript	Ribo-seq		6	sORFs_org_Mouse
97619	ENSMUST00000133697	Ssna1-203	processed_transcript	Ribo-seq		8	sORFs_org_Mouse

1876640

ATG...

MEE...

ATG

Alternative
Downstream
sORF

Glioma, Liver, MEF,
MESC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
45110	ENSMUST00000028342	Ssna1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016

970991

249

AAG...

KCI...

AAG

ncRNA
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
49960	ENSMUST00000127176	Ssna1-202	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1875775

GTG...

VFP...

GTG

Alternative
Downstream
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
45110	ENSMUST00000028342	Ssna1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

114616

ATG...

MSV...

ATG

Downstream
sORF

BMDC, Brain, Glioma,
Liver, MEF, MESC,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
45110	ENSMUST00000028342	Ssna1-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse Johnstone2016

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