Gene NCBI:68095 | MetamORF

Gene

ID CARD

NCBI:68095

Aliases

6030432N09Rik
AI481327, Asrij, AW557942
B230209J16Rik, BB021357, Emi2
ENSMUSG00000029152, Imi2, MGI:1915345
NCBI:68095, OCIA, Ociad1
OFF:Ociad1, TPA018

Chromosome

Transcripts

46 ORFs
10 known transcripts
122 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

62144

ENSMUST00000200935

Ociad1-204

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
62938	57	CTG ...	LIF ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, Testis, v6-5
185042	45	GTG ...	VVS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
183563	93	CTG ...	LVL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
183642	39	ATG ...	MHK ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
169790	30	CTG ...	LLP ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF Upstream	E14
188105	102	TTG ...	LKT ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, v6-5
190874	87	TTG ...	LEK ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14
176520	66	ATG ...	MGG ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, v6-5
65463	81	TTG ...	LSA ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF Upstream	Testis
62675	72	GTG ...	VPV ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	sORF Upstream	E14, Testis
64254	30	ATG ...	MSQ ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, Testis, v6-5
62143	54	TTG ...	LQS ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, Testis, v6-5
65239	42	ATG ...	MKS ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, Testis
517535	72	TTG ...	LYR ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	E14, v6-5

516391

ENSMUST00000201739

Ociad1-208

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
172503	60	ATG ...	MFT ...	Ribo-seq	ATG		3	sORFs_org_Mouse	NMD sORF	MEF, NSC, Spleen_B_cell
519575	45	TTG ...	LKK ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	NMD sORF	3T3, Spleen_B_cell
517369	159	GTG ...	VSG ...	Ribo-seq	GTG		5	sORFs_org_Mouse	NMD sORF	MEF, Neutrophil, NSC, R1E, Spleen_B_cell
171948	42	CTG ...	LRS ...	Ribo-seq	CTG		3	sORFs_org_Mouse	NMD sORF	MEF, Neutrophil, Spleen_B_cell
517535	72	TTG ...	LYR ...	Ribo-seq	TTG		3	sORFs_org_Mouse	NMD sORF	MEF, NSC, Spleen_B_cell
519651	54	CTG ...	LTP ...	Ribo-seq	CTG		4	sORFs_org_Mouse	NMD sORF	3T3, NSC, R1E, Spleen_B_cell
175642	129	GTG ...	VGY ...	Ribo-seq	GTG		4	sORFs_org_Mouse	NMD sORF	MEF, Neutrophil, NSC, Spleen_B_cell
517806	30	CTG ...	LCR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	NMD sORF	MEF, Spleen_B_cell
521972	57	CTG ...	LSP ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	NMD sORF	3T3, Spleen_B_cell
1019763	66	TTG ...	LFM ...	Ribo-seq	TTG		1	sORFs_org_Mouse	NMD sORF	NSC
182651	99	GTG ...	VKT ...	Ribo-seq	GTG		4	sORFs_org_Mouse	NMD sORF	MEF, Neutrophil, NSC, Spleen_B_cell
64254	30	ATG ...	MSQ ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	NMD sORF	NSC, R1E, Spleen_B_cell
185042	45	GTG ...	VVS ...	Ribo-seq	GTG		5	sORFs_org_Mouse	NMD sORF	MEF, Neutrophil, NSC, R1E, Spleen_B_cell

414527

ENSMUST00000201556

Ociad1-207

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
183642	39	ATG ...	MHK ...	Ribo-seq	ATG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, C2C12, Liver
1435284	87	TTG ...	LEK ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC, Liver
62675	72	GTG ...	VPV ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	sORF Upstream	B_cell, BMDC, Liver
169790	30	CTG ...	LLP ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF Upstream	B_cell
63777	111	CTG ...	LPS ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	sORF Upstream	B_cell, BMDC, Liver
414529	84	ATA ...	IFR ...	Ribo-seq	ATA		2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, C2C12
517535	72	TTG ...	LYR ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	Liver
904483	30	AAG ...	KYA ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
1435620	102	TTG ...	LKT ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC, Liver
62143	54	TTG ...	LQS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
176520	66	ATG ...	MGG ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, Liver
65463	81	TTG ...	LSA ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	sORF Upstream	B_cell, BMDC, Liver
414632	33	AAG ...	KCQ ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	C2C12
65239	42	ATG ...	MKS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
904556	39	AAG ...	KSA ...	Ribo-seq	AAG		1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
64647	129	TTG ...	LAI ...	Ribo-seq	TTG	strong	7	sORFs_org_Mouse	sORF Upstream	B_cell, BMDC, E14, Liver, MEF, v6-5
901561	123	ATC ...	IAW ...	Ribo-seq	ATC	strong	1	sORFs_org_Mouse	sORF Upstream	BMDC
61934	141	GTG ...	VGD ...	Ribo-seq	GTG		5	sORFs_org_Mouse	sORF Upstream	B_cell, BMDC, Liver, MEF, v6-5
62938	57	CTG ...	LIF ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, C2C12, Liver

188106

ENSMUST00000202250

Ociad1-210

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
176520	66	ATG ...	MGG ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil
183642	39	ATG ...	MHK ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Neutrophil
62675	72	GTG ...	VPV ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	sORF Upstream	Neutrophil
65463	81	TTG ...	LSA ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	sORF Upstream	Neutrophil
64578	165	GTG ...	VSA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF Upstream	Neutrophil
63777	111	CTG ...	LPS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF Upstream	Neutrophil
62938	57	CTG ...	LIF ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil
61934	141	GTG ...	VGD ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	sORF Upstream	Neutrophil
62143	54	TTG ...	LQS ...	Ribo-seq	TTG		5	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Liver, MEF, NSC
64647	129	TTG ...	LAI ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	sORF Upstream	Neutrophil
188105	102	TTG ...	LKT ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
65239	42	ATG ...	MKS ...	Ribo-seq	ATG		5	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Liver, MEF, NSC
517806	30	CTG ...	LCR ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver

167480

ENSMUST00000166823

Ociad1-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
190874	87	TTG ...	LEK ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain
62938	57	CTG ...	LIF ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14
904483	30	AAG ...	KYA ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
183642	39	ATG ...	MHK ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14
1235232	135	AAG ...	KRS ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
169790	30	CTG ...	LLP ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	sORF Upstream	3T3, Brain, E14, R1E
64254	30	ATG ...	MSQ ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
1241675	120	AAG ...	KRS ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
188105	102	TTG ...	LKT ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain
414529	84	ATA ...	IFR ...	Ribo-seq	ATA		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
65239	42	ATG ...	MKS ...	Ribo-seq	ATG		4	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, Brain, E14
901561	123	ATC ...	IAW ...	Ribo-seq	ATC	strong	1	sORFs_org_Mouse	sORF Upstream	E14
1240809	108	ACG ...	TSP ...	Ribo-seq	ACG	weak	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	E14
517806	30	CTG ...	LCR ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain
64647	129	TTG ...	LAI ...	Ribo-seq	TTG	strong	4	sORFs_org_Mouse	sORF Upstream	3T3, Brain, E14
63777	111	CTG ...	LPS ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	sORF Upstream	3T3, Brain, E14
65463	81	TTG ...	LSA ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	sORF Upstream	3T3, Brain, E14, R1E
64578	165	GTG ...	VSA ...	Ribo-seq	GTG	weak	5	sORFs_org_Mouse	sORF Upstream	3T3, Brain, MEF, v6-5
62143	54	TTG ...	LQS ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, Brain
176520	66	ATG ...	MGG ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14
62675	72	GTG ...	VPV ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	sORF Upstream	3T3, Brain, E14
61934	141	GTG ...	VGD ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	sORF Upstream	3T3, Brain
517535	72	TTG ...	LYR ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, Brain
185042	45	GTG ...	VVS ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain

61935

ENSMUST00000031038

Ociad1-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1686244	42	ATG ...	MKL ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative Downstream sORF	MEF
1686210	51	TTG ...	LCK ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative Downstream sORF	MEF
64578	165	GTG ...	VSA ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	sORF Upstream	B_cell, BMDC, Testis
61934	141	GTG ...	VGD ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	sORF Upstream	Testis
64647	129	TTG ...	LAI ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	sORF Upstream	Testis
176520	66	ATG ...	MGG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
519651	54	CTG ...	LTP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
521972	57	CTG ...	LSP ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
63777	111	CTG ...	LPS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF Upstream	Testis

171949

ENSMUST00000201191

Ociad1-205

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
517535	72	TTG ...	LYR ...	Ribo-seq	TTG	weak	4	sORFs_org_Mouse	Intronic sORF	3T3, Brain, Liver, R1E
175642	129	GTG ...	VGY ...	Ribo-seq	GTG	strong	4	sORFs_org_Mouse	Intronic sORF	3T3, Brain, R1E
182651	99	GTG ...	VKT ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	Intronic sORF	3T3, Brain, R1E
1018311	102	TTG ...	LEK ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
1019946	117	TTG ...	LKT ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
172503	60	ATG ...	MFT ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	Brain
1019763	66	TTG ...	LFM ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
171948	42	CTG ...	LRS ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	Intronic sORF	3T3, Brain, Liver, R1E

66824

ENSMUST00000071081

Ociad1-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
65239	42	ATG ...	MKS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
62143	54	TTG ...	LQS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
66823	48	ATG ...	MVQ ...	Ribo-seq	ATG		5	sORFs_org_Mouse Johnstone2016	Alternative Downstream sORF	Brain, E14, Glioma, Liver, MEF, MESC, NSC, Testis
176520	66	ATG ...	MGG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
65463	81	TTG ...	LSA ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	sORF Upstream	Spleen_B_cell
63777	111	CTG ...	LPS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF Upstream	Spleen_B_cell
62675	72	GTG ...	VPV ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	sORF Upstream	Spleen_B_cell
64647	129	TTG ...	LAI ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	sORF Upstream	MEF, Spleen_B_cell
64254	30	ATG ...	MSQ ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
188105	102	TTG ...	LKT ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
169790	30	CTG ...	LLP ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF Upstream	Spleen_B_cell
183642	39	ATG ...	MHK ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
62938	57	CTG ...	LIF ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
64578	165	GTG ...	VSA ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	sORF Upstream	Liver, Spleen_B_cell
1686244	42	ATG ...	MKL ...	Ribo-seq	ATG	weak	1	Johnstone2016	Alternative Downstream sORF	Glioma, Liver, MEF, MESC
61934	141	GTG ...	VGD ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	sORF Upstream	Spleen_B_cell

176521

ENSMUST00000201505

Ociad1-206

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
183642	39	ATG ...	MHK ...	Ribo-seq	ATG		3	sORFs_org_Mouse	sORF	Brain, Liver, R1E
62938	57	CTG ...	LIF ...	Ribo-seq	CTG		3	sORFs_org_Mouse	sORF	Brain, Liver, R1E
176520	66	ATG ...	MGG ...	Ribo-seq	ATG		3	sORFs_org_Mouse	sORF	Brain, R1E

178918

ENSMUST00000202237

Ociad1-209

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
834096	66	GTG ...	VRH ...	Ribo-seq	GTG		3	sORFs_org_Mouse	sORF	B_cell, MEF, NSC
178917	75	TTG ...	LPK ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	Brain
181599	84	CTG ...	LTI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Brain

ORFs

46 ORFs
10 known transcripts
122 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

62938

CTG...

LIF...

CTG

Alternative
InCDS
Overlapping
sORF

E14, MEF, Testis,
v6-5, 3T3, Brain,
Liver, R1E, Neutrophil,
Spleen_B_cell, B_cell, BMDC,
C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62144	ENSMUST00000200935	Ociad1-204	protein_coding	Ribo-seq		4	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq		4	sORFs_org_Mouse
176521	ENSMUST00000201505	Ociad1-206	protein_coding	Ribo-seq		3	sORFs_org_Mouse
188106	ENSMUST00000202250	Ociad1-210	protein_coding	Ribo-seq		2	sORFs_org_Mouse
66824	ENSMUST00000071081	Ociad1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq		5	sORFs_org_Mouse

172503

ATG...

MFT...

ATG

NMD
sORF
Intronic

MEF, NSC, Spleen_B_cell,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516391	ENSMUST00000201739	Ociad1-208	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
171949	ENSMUST00000201191	Ociad1-205	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

183642

ATG...

MHK...

ATG

Alternative
InCDS
Overlapping
sORF

B_cell, BMDC, C2C12,
Liver, Neutrophil, E14,
Brain, R1E, 3T3,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq		5	sORFs_org_Mouse
188106	ENSMUST00000202250	Ociad1-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
62144	ENSMUST00000200935	Ociad1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
176521	ENSMUST00000201505	Ociad1-206	protein_coding	Ribo-seq		3	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq		4	sORFs_org_Mouse
66824	ENSMUST00000071081	Ociad1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

176520

ATG...

MGG...

ATG

Alternative
InCDS
Overlapping
sORF

MEF, Neutrophil, Spleen_B_cell,
E14, v6-5, Brain,
R1E, B_cell, BMDC,
Liver, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
188106	ENSMUST00000202250	Ociad1-210	protein_coding	Ribo-seq		3	sORFs_org_Mouse
66824	ENSMUST00000071081	Ociad1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
62144	ENSMUST00000200935	Ociad1-204	protein_coding	Ribo-seq		3	sORFs_org_Mouse
176521	ENSMUST00000201505	Ociad1-206	protein_coding	Ribo-seq		3	sORFs_org_Mouse
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq		4	sORFs_org_Mouse
61935	ENSMUST00000031038	Ociad1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1435284

TTG...

LEK...

TTG

Alternative
Downstream
Overlapping
sORF

BMDC, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse

185042

GTG...

VVS...

GTG

Alternative
InCDS
Overlapping
sORF
NMD

Brain, MEF, Neutrophil,
NSC, R1E, Spleen_B_cell,
3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62144	ENSMUST00000200935	Ociad1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
516391	ENSMUST00000201739	Ociad1-208	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

190874

TTG...

LEK...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, Brain,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse
62144	ENSMUST00000200935	Ociad1-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1686244

ATG...

MKL...

ATG

Alternative
Downstream
sORF

MEF, Glioma, Liver,
MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61935	ENSMUST00000031038	Ociad1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
66824	ENSMUST00000071081	Ociad1-202	protein_coding	Ribo-seq	weak	1	Johnstone2016

517535

TTG...

LYR...

TTG

Intronic
sORF
InCDS
Overlapping
NMD

3T3, Brain, Liver,
R1E, MEF, NSC,
Spleen_B_cell, E14, v6-5,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
171949	ENSMUST00000201191	Ociad1-205	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
516391	ENSMUST00000201739	Ociad1-208	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
62144	ENSMUST00000200935	Ociad1-204	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

62675

GTG...

VPV...

GTG

sORF
Upstream

B_cell, BMDC, Liver,
Neutrophil, Spleen_B_cell, E14,
Testis, 3T3, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
188106	ENSMUST00000202250	Ociad1-210	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
66824	ENSMUST00000071081	Ociad1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
62144	ENSMUST00000200935	Ociad1-204	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse

183563

CTG...

LVL...

CTG

Alternative
InCDS
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62144	ENSMUST00000200935	Ociad1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

169790

CTG...

LLP...

CTG

sORF
Upstream

B_cell, 3T3, Brain,
E14, R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
62144	ENSMUST00000200935	Ociad1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
66824	ENSMUST00000071081	Ociad1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

65239

ATG...

MKS...

ATG

InCDS
Overlapping
sORF

Spleen_B_cell, B_cell, Brain,
E14, MEF, Testis,
BMDC, Liver, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
66824	ENSMUST00000071081	Ociad1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq		4	sORFs_org_Mouse
62144	ENSMUST00000200935	Ociad1-204	protein_coding	Ribo-seq		3	sORFs_org_Mouse
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
188106	ENSMUST00000202250	Ociad1-210	protein_coding	Ribo-seq		5	sORFs_org_Mouse

519575

TTG...

LKK...

TTG

NMD
sORF

3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516391	ENSMUST00000201739	Ociad1-208	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

63777

111

CTG...

LPS...

CTG

sORF
Upstream

B_cell, BMDC, Liver,
Spleen_B_cell, Neutrophil, 3T3,
Brain, E14, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
66824	ENSMUST00000071081	Ociad1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
188106	ENSMUST00000202250	Ociad1-210	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
61935	ENSMUST00000031038	Ociad1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1686210

TTG...

LCK...

TTG

Alternative
Downstream
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61935	ENSMUST00000031038	Ociad1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

62143

TTG...

LQS...

TTG

InCDS
Overlapping
sORF

Spleen_B_cell, BMDC, E14,
Testis, v6-5, Brain,
Liver, MEF, NSC,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
66824	ENSMUST00000071081	Ociad1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
62144	ENSMUST00000200935	Ociad1-204	protein_coding	Ribo-seq		3	sORFs_org_Mouse
188106	ENSMUST00000202250	Ociad1-210	protein_coding	Ribo-seq		5	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse

414529

ATA...

IFR...

ATA

InCDS
Overlapping
sORF

BMDC, C2C12, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

904483

AAG...

KYA...

AAG

InCDS
Overlapping
sORF

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

517369

159

GTG...

VSG...

GTG

NMD
sORF

MEF, Neutrophil, NSC,
R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516391	ENSMUST00000201739	Ociad1-208	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse

171948

CTG...

LRS...

CTG

NMD
sORF
Intronic

MEF, Neutrophil, Spleen_B_cell,
3T3, Brain, Liver,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516391	ENSMUST00000201739	Ociad1-208	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
171949	ENSMUST00000201191	Ociad1-205	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse

66823

ATG...

MVQ...

ATG

Alternative
Downstream
sORF

Brain, E14, Glioma,
Liver, MEF, MESC,
NSC, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
66824	ENSMUST00000071081	Ociad1-202	protein_coding	Ribo-seq		5	sORFs_org_Mouse Johnstone2016

1235232

135

AAG...

KRS...

AAG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1435620

102

TTG...

LKT...

TTG

Alternative
Downstream
Overlapping
sORF

BMDC, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse

64254

ATG...

MSQ...

ATG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, Brain, NSC,
R1E, Spleen_B_cell, E14,
Testis, v6-5, Glioma,
Liver, MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
516391	ENSMUST00000201739	Ociad1-208	nonsense_mediated_decay	Ribo-seq	moderate	3	sORFs_org_Mouse
62144	ENSMUST00000200935	Ociad1-204	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
66824	ENSMUST00000071081	Ociad1-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016

188105

102

TTG...

LKT...

TTG

Alternative
InCDS
Overlapping
sORF

E14, v6-5, 3T3,
B_cell, Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62144	ENSMUST00000200935	Ociad1-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse
66824	ENSMUST00000071081	Ociad1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
188106	ENSMUST00000202250	Ociad1-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1241675

120

AAG...

KRS...

AAG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

519651

CTG...

LTP...

CTG

NMD
sORF
InCDS
Overlapping

3T3, NSC, R1E,
Spleen_B_cell, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516391	ENSMUST00000201739	Ociad1-208	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
61935	ENSMUST00000031038	Ociad1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

65463

TTG...

LSA...

TTG

sORF
Upstream

Spleen_B_cell, Testis, Neutrophil,
B_cell, BMDC, Liver,
3T3, Brain, E14,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
66824	ENSMUST00000071081	Ociad1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
62144	ENSMUST00000200935	Ociad1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
188106	ENSMUST00000202250	Ociad1-210	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse

175642

129

GTG...

VGY...

GTG

NMD
sORF
Intronic

MEF, Neutrophil, NSC,
Spleen_B_cell, 3T3, Brain,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516391	ENSMUST00000201739	Ociad1-208	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
171949	ENSMUST00000201191	Ociad1-205	retained_intron	Ribo-seq	strong	4	sORFs_org_Mouse

901561

123

ATC...

IAW...

ATC

sORF
Upstream

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

517806

CTG...

LCR...

CTG

NMD
sORF
Alternative
InCDS
Overlapping

MEF, Spleen_B_cell, 3T3,
B_cell, Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516391	ENSMUST00000201739	Ociad1-208	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
188106	ENSMUST00000202250	Ociad1-210	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

64578

165

GTG...

VSA...

GTG

sORF
Upstream

B_cell, BMDC, Testis,
Neutrophil, 3T3, Brain,
MEF, v6-5, Liver,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61935	ENSMUST00000031038	Ociad1-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
188106	ENSMUST00000202250	Ociad1-210	protein_coding	Ribo-seq		1	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse
66824	ENSMUST00000071081	Ociad1-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

1240809

108

ACG...

TSP...

ACG

Alternative
Downstream
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

61934

141

GTG...

VGD...

GTG

sORF
Upstream

Testis, Neutrophil, B_cell,
BMDC, Liver, MEF,
v6-5, 3T3, Brain,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61935	ENSMUST00000031038	Ociad1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
188106	ENSMUST00000202250	Ociad1-210	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq		5	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
66824	ENSMUST00000071081	Ociad1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

521972

CTG...

LSP...

CTG

NMD
sORF
InCDS
Overlapping

3T3, Spleen_B_cell, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516391	ENSMUST00000201739	Ociad1-208	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse
61935	ENSMUST00000031038	Ociad1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

182651

GTG...

VKT...

GTG

Intronic
sORF
NMD

3T3, Brain, R1E,
MEF, Neutrophil, NSC,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
171949	ENSMUST00000201191	Ociad1-205	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse
516391	ENSMUST00000201739	Ociad1-208	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

1018311

102

TTG...

LEK...

TTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
171949	ENSMUST00000201191	Ociad1-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

64647

129

TTG...

LAI...

TTG

sORF
Upstream

MEF, Spleen_B_cell, 3T3,
Brain, E14, Testis,
Neutrophil, B_cell, BMDC,
Liver, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
66824	ENSMUST00000071081	Ociad1-202	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
167480	ENSMUST00000166823	Ociad1-203	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse
61935	ENSMUST00000031038	Ociad1-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
188106	ENSMUST00000202250	Ociad1-210	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq	strong	7	sORFs_org_Mouse

1019763

TTG...

LFM...

TTG

NMD
sORF
Intronic

NSC, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516391	ENSMUST00000201739	Ociad1-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
171949	ENSMUST00000201191	Ociad1-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

834096

GTG...

VRH...

GTG

sORF

B_cell, MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
178918	ENSMUST00000202237	Ociad1-209	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1019946

117

TTG...

LKT...

TTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
171949	ENSMUST00000201191	Ociad1-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

414632

AAG...

KCQ...

AAG

Alternative
InCDS
Overlapping
sORF

C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse

178917

TTG...

LPK...

TTG

sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
178918	ENSMUST00000202237	Ociad1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

904556

AAG...

KSA...

AAG

InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
414527	ENSMUST00000201556	Ociad1-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse

181599

CTG...

LTI...

CTG

sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
178918	ENSMUST00000202237	Ociad1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

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