Gene NCBI:58520 | MetamORF

Gene

ID CARD

NCBI:58520

Aliases

0610007P14Rik
1190004E09Rik, AU019315, C77855
ENSMUSG00000021252, Erg28, MGI:1915571
NCBI:58520, OFF:Erg28, ORF11

Chromosome

Transcripts

40 ORFs
5 known transcripts
76 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

320889

ENSMUST00000131681

Erg28-203

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
320888	159	GTG ...	VLR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	BMDC, Brain
328087	42	TTG ...	LEQ ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	ncRNA sORF	3T3, BMDC, Brain
324266	105	GTG ...	VDI ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	3T3, Brain
325153	69	CTG ...	LGM ...	Ribo-seq	CTG	strong	4	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain, E14
24760	108	CTG ...	LAG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Brain
665842	129	TTG ...	LQT ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
331378	141	TTG ...	LFV ...	Ribo-seq	TTG		3	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain
324864	48	TTG ...	LYL ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	ncRNA sORF	3T3, Brain
327264	153	CTG ...	LWT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Brain
24891	84	CTG ...	LHS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Brain
329984	105	GTG ...	VLA ...	Ribo-seq	GTG		3	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain
324562	51	ATG ...	MAS ...	Ribo-seq	ATG		2	sORFs_org_Mouse	ncRNA sORF	BMDC, Liver
327937	141	CTG ...	LSV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	3T3, Brain
330431	162	CTG ...	LGH ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain
25795	45	CTG ...	LDA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	BMDC, Brain
320952	135	GTG ...	VSI ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	BMDC, Brain
25896	150	TTG ...	LEG ...	Ribo-seq	TTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
328932	183	CTG ...	LWT ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain
329128	93	CTG ...	LMV ...	Ribo-seq	CTG		4	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain, E14
322627	51	CTG ...	LSK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Brain
324629	60	CTG ...	LVG ...	Ribo-seq	CTG	strong	4	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain, E14
322283	39	ATG ...	MCY ...	Ribo-seq	ATG		3	sORFs_org_Mouse	ncRNA sORF	BMDC, Brain, Liver
325869	30	TTG ...	LGS ...	Ribo-seq	TTG		2	sORFs_org_Mouse	ncRNA sORF	BMDC, Brain
330713	102	CTG ...	LAP ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain
322438	144	CTG ...	LVM ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	BMDC, Brain
321480	99	CTG ...	LLS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Brain
328488	165	CTG ...	LNV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	BMDC, Brain

26236

ENSMUST00000021676

Erg28-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
329947	273	GTG ...	VDP ...	Ribo-seq	GTG		3	sORFs_org_Mouse	CDS sORF	Brain, Liver, R1E
329154	129	TTG ...	LTS ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, R1E, Spleen_B_cell
325869	30	TTG ...	LGS ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Liver, R1E, Spleen_B_cell
327973	30	TTG ...	LRM ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	Alternative sORF Upstream	BMDC, Brain, Liver, MEF, R1E
324864	48	TTG ...	LYL ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver, Spleen_B_cell
329245	282	CTG ...	LRD ...	Ribo-seq	CTG		3	sORFs_org_Mouse	CDS sORF	Brain, Liver, R1E
329698	213	CTG ...	LFP ...	Ribo-seq	CTG		5	sORFs_org_Mouse	CDS sORF	3T3, B_cell, Brain, Liver, R1E
324266	105	GTG ...	VDI ...	Ribo-seq	GTG		4	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, Spleen_B_cell, v6-5
329094	135	GTG ...	VPL ...	Ribo-seq	GTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, Liver, R1E, Spleen_B_cell
329893	291	GTG ...	VNG ...	Ribo-seq	GTG		13	sORFs_org_Mouse	CDS sORF	3T3, BMDC, Brain, E14, Liver, MEF, Neutrophil, R1E, v6-5
25795	45	CTG ...	LDA ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E, Spleen_B_cell
26235	249	CTG ...	LDR ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	R1E, Spleen_B_cell, Testis
24760	108	CTG ...	LAG ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	R1E, Spleen_B_cell
25896	150	TTG ...	LEG ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Overlapping sORF Upstream	R1E, Spleen_B_cell
328087	42	TTG ...	LEQ ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver, Spleen_B_cell
328884	288	GTG ...	VYL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	CDS sORF	Brain, Liver, R1E
324562	51	ATG ...	MAS ...	Ribo-seq	ATG	moderate	5	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	Brain, Glioma, Liver, MEF, MESC, R1E, Spleen_B_cell
322283	39	ATG ...	MCY ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC, Spleen_B_cell
1346100	276	TTG ...	LQT ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	E14

24892

ENSMUST00000124311

Erg28-202

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1299469	114	ACG ...	TKL ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
25795	45	CTG ...	LDA ...	Ribo-seq	CTG	strong	8	sORFs_org_Mouse	Intronic sORF	3T3, E14, Liver, MEF, NSC, Testis, v6-5
24891	84	CTG ...	LHS ...	Ribo-seq	CTG	weak	8	sORFs_org_Mouse	Intronic sORF	3T3, E14, Liver, MEF, NSC, Testis, v6-5
322438	144	CTG ...	LVM ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Intronic sORF	E14, Liver, Neutrophil, Spleen_B_cell
325869	30	TTG ...	LGS ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	Intronic sORF	3T3, Liver, MEF, v6-5
939999	126	ATA ...	IAM ...	Ribo-seq	ATA	strong	1	sORFs_org_Mouse	Intronic sORF	BMDC
320888	159	GTG ...	VLR ...	Ribo-seq	GTG	moderate	5	sORFs_org_Mouse	Intronic sORF	E14, Liver, Neutrophil, NSC, v6-5
24760	108	CTG ...	LAG ...	Ribo-seq	CTG	strong	8	sORFs_org_Mouse	Intronic sORF	3T3, E14, Liver, MEF, Neutrophil, NSC, v6-5
322283	39	ATG ...	MCY ...	Ribo-seq	ATG	weak	10	sORFs_org_Mouse	Intronic sORF	3T3, BMDC, E14, Liver, MEF, Neutrophil, NSC, v6-5
320952	135	GTG ...	VSI ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Intronic sORF	E14, Liver, Neutrophil
25896	150	TTG ...	LEG ...	Ribo-seq	TTG	moderate	7	sORFs_org_Mouse	Intronic sORF	3T3, E14, Liver, MEF, Neutrophil, NSC, v6-5
321480	99	CTG ...	LLS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Liver
327973	30	TTG ...	LRM ...	Ribo-seq	TTG	moderate	11	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Brain, E14, Liver, MEF, Neutrophil, NSC, v6-5
1297060	42	AAG ...	KPG ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
328488	165	CTG ...	LNV ...	Ribo-seq	CTG	weak	7	sORFs_org_Mouse	Intronic sORF	BMDC, E14, Liver, Neutrophil, NSC, v6-5
324562	51	ATG ...	MAS ...	Ribo-seq	ATG	moderate	5	sORFs_org_Mouse	Intronic sORF	3T3, Brain, E14, Liver, MEF

778680

ENSMUST00000148323

Erg28-205

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
320888	159	GTG ...	VLR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
324562	51	ATG ...	MAS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
322283	39	ATG ...	MCY ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	B_cell
24760	108	CTG ...	LAG ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
328488	165	CTG ...	LNV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
25896	150	TTG ...	LEG ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
24891	84	CTG ...	LHS ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, MEF
25795	45	CTG ...	LDA ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Intronic sORF	Brain, MEF
322438	144	CTG ...	LVM ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
325869	30	TTG ...	LGS ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
320952	135	GTG ...	VSI ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain

24761

ENSMUST00000142331

Erg28-204

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
327973	30	TTG ...	LRM ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	sORF	MEF
24760	108	CTG ...	LAG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Testis
25896	150	TTG ...	LEG ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	Testis

ORFs

40 ORFs
5 known transcripts
76 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

320888

159

GTG...

VLR...

GTG

ncRNA
sORF
Intronic

BMDC, Brain, B_cell,
E14, Liver, Neutrophil,
NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
778680	ENSMUST00000148323	Erg28-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
24892	ENSMUST00000124311	Erg28-202	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse

329947

273

GTG...

VDP...

GTG

CDS
sORF

Brain, Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1299469

114

ACG...

TKL...

ACG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24892	ENSMUST00000124311	Erg28-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

329154

129

TTG...

LTS...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, Brain,
E14, R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

25795

CTG...

LDA...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping
ncRNA

3T3, E14, Liver,
MEF, NSC, Testis,
v6-5, Brain, R1E,
Spleen_B_cell, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24892	ENSMUST00000124311	Erg28-202	retained_intron	Ribo-seq	strong	8	sORFs_org_Mouse
778680	ENSMUST00000148323	Erg28-205	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

24891

CTG...

LHS...

CTG

Intronic
sORF
ncRNA

3T3, E14, Liver,
MEF, NSC, Testis,
v6-5, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24892	ENSMUST00000124311	Erg28-202	retained_intron	Ribo-seq	weak	8	sORFs_org_Mouse
778680	ENSMUST00000148323	Erg28-205	retained_intron	Ribo-seq		4	sORFs_org_Mouse
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

328087

TTG...

LEQ...

TTG

ncRNA
sORF
Alternative
InCDS
Overlapping

3T3, BMDC, Brain,
Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq	moderate	3	sORFs_org_Mouse
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

322438

144

CTG...

LVM...

CTG

Intronic
sORF
ncRNA

E14, Liver, Neutrophil,
Spleen_B_cell, B_cell, Brain,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24892	ENSMUST00000124311	Erg28-202	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
778680	ENSMUST00000148323	Erg28-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

324266

105

GTG...

VDI...

GTG

ncRNA
sORF
InCDS
Overlapping

3T3, Brain, E14,
MEF, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

325153

CTG...

LGM...

CTG

ncRNA
sORF

3T3, B_cell, Brain,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq	strong	4	sORFs_org_Mouse

325869

TTG...

LGS...

TTG

Intronic
sORF
InCDS
Overlapping
ncRNA

3T3, Liver, MEF,
v6-5, Brain, R1E,
Spleen_B_cell, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24892	ENSMUST00000124311	Erg28-202	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
778680	ENSMUST00000148323	Erg28-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

24760

108

CTG...

LAG...

CTG

ncRNA
sORF
Intronic
InCDS
Overlapping

Brain, 3T3, E14,
Liver, MEF, Neutrophil,
NSC, v6-5, B_cell,
Testis, R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
24892	ENSMUST00000124311	Erg28-202	retained_intron	Ribo-seq	strong	8	sORFs_org_Mouse
778680	ENSMUST00000148323	Erg28-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse
24761	ENSMUST00000142331	Erg28-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

324562

ATG...

MAS...

ATG

Intronic
sORF
ncRNA
InCDS
Overlapping

MEF, BMDC, Liver,
Brain, Glioma, MESC,
R1E, Spleen_B_cell, 3T3,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
778680	ENSMUST00000148323	Erg28-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse Johnstone2016
24892	ENSMUST00000124311	Erg28-202	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse

665842

129

TTG...

LQT...

TTG

ncRNA
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

331378

141

TTG...

LFV...

TTG

ncRNA
sORF

3T3, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

939999

126

ATA...

IAM...

ATA

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24892	ENSMUST00000124311	Erg28-202	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

322283

ATG...

MCY...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping
ncRNA

B_cell, 3T3, BMDC,
E14, Liver, MEF,
Neutrophil, NSC, v6-5,
Glioma, MESC, Spleen_B_cell,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
778680	ENSMUST00000148323	Erg28-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
24892	ENSMUST00000124311	Erg28-202	retained_intron	Ribo-seq	weak	10	sORFs_org_Mouse
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse Johnstone2016
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

324864

TTG...

LYL...

TTG

ncRNA
sORF
Alternative
InCDS
Overlapping

3T3, Brain, Liver,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

320952

135

GTG...

VSI...

GTG

Intronic
sORF
ncRNA

E14, Liver, Neutrophil,
BMDC, Brain, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24892	ENSMUST00000124311	Erg28-202	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
778680	ENSMUST00000148323	Erg28-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse

328488

165

CTG...

LNV...

CTG

Intronic
sORF
ncRNA

B_cell, Brain, BMDC,
E14, Liver, Neutrophil,
NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
778680	ENSMUST00000148323	Erg28-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
24892	ENSMUST00000124311	Erg28-202	retained_intron	Ribo-seq	weak	7	sORFs_org_Mouse
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

25896

150

TTG...

LEG...

TTG

Intronic
sORF
Overlapping
Upstream
ncRNA

3T3, E14, Liver,
MEF, Neutrophil, NSC,
v6-5, B_cell, Brain,
R1E, Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24892	ENSMUST00000124311	Erg28-202	retained_intron	Ribo-seq	moderate	7	sORFs_org_Mouse
778680	ENSMUST00000148323	Erg28-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
24761	ENSMUST00000142331	Erg28-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

327264

153

CTG...

LWT...

CTG

ncRNA
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

327973

TTG...

LRM...

TTG

Alternative
sORF
Upstream
Intronic

BMDC, Brain, Liver,
MEF, R1E, 3T3,
B_cell, E14, Neutrophil,
NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
24761	ENSMUST00000142331	Erg28-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
24892	ENSMUST00000124311	Erg28-202	retained_intron	Ribo-seq	moderate	11	sORFs_org_Mouse

329984

105

GTG...

VLA...

GTG

ncRNA
sORF

3T3, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

329245

282

CTG...

LRD...

CTG

CDS
sORF

Brain, Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

329698

213

CTG...

LFP...

CTG

CDS
sORF

3T3, B_cell, Brain,
Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse

329094

135

GTG...

VPL...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, Brain,
E14, Liver, R1E,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq		8	sORFs_org_Mouse

329893

291

GTG...

VNG...

GTG

CDS
sORF

3T3, BMDC, Brain,
E14, Liver, MEF,
Neutrophil, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq		13	sORFs_org_Mouse

26235

249

CTG...

LDR...

CTG

Alternative
Overlapping
sORF
Upstream

R1E, Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

327937

141

CTG...

LSV...

CTG

ncRNA
sORF

3T3, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

330431

162

CTG...

LGH...

CTG

ncRNA
sORF

3T3, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

328884

288

GTG...

VYL...

GTG

CDS
sORF

Brain, Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

321480

CTG...

LLS...

CTG

Intronic
sORF
ncRNA

Liver, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24892	ENSMUST00000124311	Erg28-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

328932

183

CTG...

LWT...

CTG

ncRNA
sORF

3T3, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

329128

CTG...

LMV...

CTG

ncRNA
sORF

3T3, B_cell, Brain,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		4	sORFs_org_Mouse

322627

CTG...

LSK...

CTG

ncRNA
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1297060

AAG...

KPG...

AAG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
24892	ENSMUST00000124311	Erg28-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

324629

CTG...

LVG...

CTG

ncRNA
sORF

3T3, B_cell, Brain,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq	strong	4	sORFs_org_Mouse

330713

102

CTG...

LAP...

CTG

ncRNA
sORF

3T3, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320889	ENSMUST00000131681	Erg28-203	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

1346100

276

TTG...

LQT...

TTG

Alternative
Downstream
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26236	ENSMUST00000021676	Erg28-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

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