Gene NCBI:54351 | MetamORF

Gene

ID CARD

NCBI:54351

Aliases

Derp6
Elp5, ENSMUSG00000018565, MGI:1859017
NCBI:54351, OFF:Elp5, Rai12

Chromosome

Transcripts

73 ORFs
10 known transcripts
166 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

18284

ENSMUST00000151766

Elp5-210

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
21935	39	TTG ...	LMM ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Intronic sORF	MEF, Testis
21988	102	CTG ...	LHP ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Testis
20276	33	ATG ...	MWT ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	Testis
18283	39	GTG ...	VDP ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Testis
19688	45	ATG ...	MLL ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	MEF, Testis
91754	87	TTG ...	LTF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Testis
20024	54	ATG ...	MSQ ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	MEF, Testis
21030	105	CTG ...	LLH ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, Testis
639654	69	CTG ...	LAT ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
21539	36	ATG ...	MMW ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	MEF, Testis
91523	105	GTG ...	VDP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Testis
90683	30	CTG ...	LPF ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	MEF, Testis

769177

ENSMUST00000142788

Elp5-206

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
19165	30	CTG ...	LEK ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, Brain, MEF
295178	60	GTG ...	VEW ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, Neutrophil
91754	87	TTG ...	LTF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Downstream NMD sORF	B_cell
307099	66	CTG ...	LGC ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	B_cell, MEF
769176	30	CTG ...	LVK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell
21935	39	TTG ...	LMM ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, MEF
296256	90	ATG ...	MAQ ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain
313390	75	ATG ...	MKG ...	Ribo-seq	ATG		1	Johnstone2016	Alternative Downstream NMD sORF	Glioma, Liver, MEF, MESC
19688	45	ATG ...	MLL ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14, MEF
20276	33	ATG ...	MWT ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, MEF
21988	102	CTG ...	LHP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Downstream NMD sORF	B_cell
20024	54	ATG ...	MSQ ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse Johnstone2016	Alternative Downstream NMD sORF	B_cell, Glioma, Liver, MEF, MESC
299769	39	ATG ...	MKS ...	Ribo-seq	ATG	weak	1	Johnstone2016	Alternative Downstream NMD sORF	Glioma, Liver, MEF, MESC
304134	36	CTG ...	LKA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell
17845	66	ATG ...	MTS ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, Brain
299376	75	TTG ...	LPL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain
312456	54	GTG ...	VSE ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	B_cell, MEF
21539	36	ATG ...	MMW ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, MEF
17887	36	GTG ...	VGS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell
306096	69	TTG ...	LTL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain
309953	33	GTG ...	VLH ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, Brain, MEF
639654	69	CTG ...	LAT ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, MEF
21030	105	CTG ...	LLH ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Downstream NMD sORF	B_cell
18283	39	GTG ...	VDP ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Downstream NMD sORF	B_cell

1122117

ENSMUST00000143788

Elp5-208

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
769176	30	CTG ...	LVK ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	v6-5
309953	33	GTG ...	VLH ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	E14, v6-5
296256	90	ATG ...	MAQ ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Intronic sORF	E14
299376	75	TTG ...	LPL ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
1338525	42	GTG ...	VQK ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
312456	54	GTG ...	VSE ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Intronic sORF	E14, MEF, v6-5
307099	66	CTG ...	LGC ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	E14, MEF, v6-5
304134	36	CTG ...	LKA ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	v6-5
295178	60	GTG ...	VEW ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	E14, v6-5
17887	36	GTG ...	VGS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
19165	30	CTG ...	LEK ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	E14
17845	66	ATG ...	MTS ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	Intronic sORF	Brain, E14, MEF, v6-5
306096	69	TTG ...	LTL ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	E14

1080374

ENSMUST00000138562

Elp5-205

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
17845	66	ATG ...	MTS ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	E14, Neutrophil
17603	207	CTG ...	LGL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Liver
296256	90	ATG ...	MAQ ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Intronic sORF	E14
312456	54	GTG ...	VSE ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	E14
769176	30	CTG ...	LVK ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
1288524	42	ATG ...	MET ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	E14
295178	60	GTG ...	VEW ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
418794	165	AAG ...	KSF ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Intronic sORF	E14
307099	66	CTG ...	LGC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	E14

294874

ENSMUST00000127437

Elp5-204

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
309953	33	GTG ...	VLH ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	Brain
299376	75	TTG ...	LPL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	NMD sORF	Brain
17603	207	CTG ...	LGL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	Brain
91403	87	CTG ...	LTL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	NMD sORF	Brain
307099	66	CTG ...	LGC ...	Ribo-seq	CTG		2	sORFs_org_Mouse	NMD sORF	BMDC, Brain
299769	39	ATG ...	MKS ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	NMD sORF	Brain
418794	165	AAG ...	KSF ...	Ribo-seq	AAG		1	sORFs_org_Mouse	NMD sORF	C2C12
312456	54	GTG ...	VSE ...	Ribo-seq	GTG		3	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Liver
295178	60	GTG ...	VEW ...	Ribo-seq	GTG		2	sORFs_org_Mouse	NMD sORF	BMDC, Brain
19545	216	GTG ...	VRV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	Brain
304134	36	CTG ...	LKA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	NMD sORF	BMDC, Brain, Liver
17845	66	ATG ...	MTS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	NMD sORF	C2C12
295751	57	GTG ...	VSW ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	NMD sORF	Brain

293335

ENSMUST00000108594

Elp5-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
296256	90	ATG ...	MAQ ...	Ribo-seq	ATG	strong	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain
20749	111	GTG ...	VVT ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Brain, R1E
306096	69	TTG ...	LTL ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
305889	246	CTG ...	LCT ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Brain, R1E
17845	66	ATG ...	MTS ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain
19277	108	GTG ...	VTT ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, BMDC, Brain, R1E
297095	159	TTG ...	LRS ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Brain, R1E
295525	231	CTG ...	LER ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Brain, R1E
22313	90	ATG ...	MST ...	Ribo-seq	ATG		12	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, MEF, NSC, R1E, Spleen_B_cell, v6-5
293334	258	TTG ...	LSL ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Brain, R1E
318878	264	TTG ...	LSL ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Overlapping sORF Upstream	3T3, B_cell, Brain, R1E
937591	114	GTG ...	VTT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Overlapping sORF Upstream	BMDC, R1E
299376	75	TTG ...	LPL ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
1343567	48	CTG ...	LSS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF
310150	204	CTG ...	LRI ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Brain, R1E
295923	261	ATG ...	MLS ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, BMDC, Brain, R1E
659700	81	CTG ...	LAA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, MEF
1129040	60	CTG ...	LCY ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, v6-5
313390	75	ATG ...	MKG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
313922	237	CTG ...	LER ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Overlapping sORF Upstream	3T3, Brain, R1E
17887	36	GTG ...	VGS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
1128845	72	GTG ...	VSH ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, v6-5
1845543	114	CTG ...	LKN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
91217	87	CTG ...	LRR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF
654915	45	CTG ...	LHF ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, R1E
19688	45	ATG ...	MLL ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF, v6-5
313791	252	CTG ...	LCT ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Overlapping sORF Upstream	3T3, Brain, R1E
1704303	93	CTG ...	LRR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Overlapping sORF Upstream	MEF, R1E
1844206	117	GTG ...	VVT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Overlapping sORF Upstream	R1E
21539	36	ATG ...	MMW ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, v6-5
20024	54	ATG ...	MSQ ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, v6-5
21935	39	TTG ...	LMM ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
20276	33	ATG ...	MWT ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, v6-5
639654	69	CTG ...	LAT ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, v6-5
315379	267	ATG ...	MLS ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Overlapping sORF Upstream	3T3, BMDC, Brain, R1E
22359	54	GTG ...	VVW ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	v6-5
23146	93	CTG ...	LMS ...	Ribo-seq	CTG		11	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, MEF, NSC, R1E, Spleen_B_cell, v6-5
315609	165	TTG ...	LRS ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Overlapping sORF Upstream	3T3, Brain, R1E
313181	210	CTG ...	LRI ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Overlapping sORF Upstream	3T3, Brain, R1E

447909

ENSMUST00000108595

Elp5-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
310150	204	CTG ...	LRI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	B_cell
315609	165	TTG ...	LRS ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	B_cell, Brain
17845	66	ATG ...	MTS ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	sORF	Liver, Spleen_B_cell
297095	159	TTG ...	LRS ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	B_cell, Spleen_B_cell
91217	87	CTG ...	LRR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Brain
20749	111	GTG ...	VVT ...	Ribo-seq	GTG		3	sORFs_org_Mouse	sORF	B_cell, Brain, Spleen_B_cell
305889	246	CTG ...	LCT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	B_cell
19277	108	GTG ...	VTT ...	Ribo-seq	GTG		3	sORFs_org_Mouse	sORF	B_cell, Brain, Spleen_B_cell
295525	231	CTG ...	LER ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	B_cell
654915	45	CTG ...	LHF ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	B_cell

17604

ENSMUST00000123701

Elp5-203

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
307099	66	CTG ...	LGC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
90825	129	CTG ...	LSG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Testis
295178	60	GTG ...	VEW ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	R1E
91403	87	CTG ...	LTL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Testis
312456	54	GTG ...	VSE ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	R1E
20803	135	GTG ...	VTL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Testis
21539	36	ATG ...	MMW ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	R1E
91523	105	GTG ...	VDP ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
18283	39	GTG ...	VDP ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Intronic sORF	R1E
17603	207	CTG ...	LGL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	R1E, Testis
17887	36	GTG ...	VGS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	R1E
90683	30	CTG ...	LPF ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
19165	30	CTG ...	LEK ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	R1E
19545	216	GTG ...	VRV ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	R1E, Testis
21988	102	CTG ...	LHP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	R1E
21935	39	TTG ...	LMM ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	R1E
296256	90	ATG ...	MAQ ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Intronic sORF	R1E
21030	105	CTG ...	LLH ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	R1E
299376	75	TTG ...	LPL ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	R1E
309953	33	GTG ...	VLH ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	R1E
91754	87	TTG ...	LTF ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
306096	69	TTG ...	LTL ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	R1E
20276	33	ATG ...	MWT ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	R1E
22038	117	GTG ...	VDQ ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Testis
17845	66	ATG ...	MTS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	R1E
19688	45	ATG ...	MLL ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	R1E
90859	159	CTG ...	LNT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Testis

17846

ENSMUST00000147437

Elp5-209

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
23683	252	CTG ...	LCT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Testis
20749	111	GTG ...	VVT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	Testis
23128	165	TTG ...	LRS ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	MEF, Testis
22359	54	GTG ...	VVW ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF	MEF, Testis
91217	87	CTG ...	LRR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF	MEF, Testis
22868	210	CTG ...	LRI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Testis
17887	36	GTG ...	VGS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	Testis
23527	237	CTG ...	LER ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Testis
22330	267	ATG ...	MLS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	Testis
22313	90	ATG ...	MST ...	Ribo-seq	ATG		8	sORFs_org_Mouse	sORF	BMDC, Brain, E14, Liver, Neutrophil, Testis
19165	30	CTG ...	LEK ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	sORF	Testis
22431	264	TTG ...	LSL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	Testis
19277	108	GTG ...	VTT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	Testis
23146	93	CTG ...	LMS ...	Ribo-seq	CTG		6	sORFs_org_Mouse	sORF	BMDC, Brain, Liver, Neutrophil, Testis
17845	66	ATG ...	MTS ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	sORF	BMDC, Testis
1294603	117	AAG ...	KSF ...	Ribo-seq	AAG		1	sORFs_org_Mouse	sORF	E14

2991587

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
296256	90	ATG ...	MAQ ...	Predicted	ATG		1	Samandi2017	sORF
22330	267	ATG ...	MLS ...	Predicted	ATG		1	Samandi2017	sORF
315379	267	ATG ...	MLS ...	Predicted	ATG		1	Samandi2017	sORF

1286185

ENSMUST00000143175

Elp5-207

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
295923	261	ATG ...	MLS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	E14
1287972	276	AAG ...	KSR ...	Ribo-seq	AAG		1	sORFs_org_Mouse	sORF	E14
1292043	36	ACG ...	TAL ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	sORF	E14

ORFs

73 ORFs
10 known transcripts
166 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

21935

TTG...

LMM...

TTG

Intronic
sORF
Alternative
Downstream
NMD
InCDS
Overlapping

MEF, Testis, B_cell,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18284	ENSMUST00000151766	Elp5-210	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

19165

CTG...

LEK...

CTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

B_cell, Brain, MEF,
Testis, R1E, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
17846	ENSMUST00000147437	Elp5-209	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
1122117	ENSMUST00000143788	Elp5-208	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

769176

CTG...

LVK...

CTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

v6-5, B_cell, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1122117	ENSMUST00000143788	Elp5-208	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1080374	ENSMUST00000138562	Elp5-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

17845

ATG...

MTS...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD

E14, Neutrophil, 3T3,
BMDC, Brain, Liver,
Spleen_B_cell, B_cell, C2C12,
Testis, MEF, v6-5,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1080374	ENSMUST00000138562	Elp5-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
447909	ENSMUST00000108595	Elp5-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
294874	ENSMUST00000127437	Elp5-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
17846	ENSMUST00000147437	Elp5-209	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
1122117	ENSMUST00000143788	Elp5-208	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

309953

GTG...

VLH...

GTG

NMD
sORF
Intronic
Alternative
InCDS
Overlapping

Brain, E14, v6-5,
R1E, B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
294874	ENSMUST00000127437	Elp5-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1122117	ENSMUST00000143788	Elp5-208	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

296256

ATG...

MAQ...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic
NMD

3T3, BMDC, Brain,
E14, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
1080374	ENSMUST00000138562	Elp5-205	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
2991587	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
1122117	ENSMUST00000143788	Elp5-208	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

310150

204

CTG...

LRI...

CTG

sORF
Alternative
Overlapping
Upstream

B_cell, 3T3, Brain,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
447909	ENSMUST00000108595	Elp5-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

307099

CTG...

LGC...

CTG

Intronic
sORF
NMD
InCDS
Overlapping

R1E, BMDC, Brain,
B_cell, MEF, E14,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
294874	ENSMUST00000127437	Elp5-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
1122117	ENSMUST00000143788	Elp5-208	retained_intron	Ribo-seq		4	sORFs_org_Mouse
1080374	ENSMUST00000138562	Elp5-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

23683

252

CTG...

LCT...

CTG

sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17846	ENSMUST00000147437	Elp5-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

90825

129

CTG...

LSG...

CTG

Intronic
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

20749

111

GTG...

VVT...

GTG

Alternative
Overlapping
sORF
Upstream

3T3, Brain, R1E,
Testis, B_cell, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
17846	ENSMUST00000147437	Elp5-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse
447909	ENSMUST00000108595	Elp5-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

306096

TTG...

LTL...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic
NMD

3T3, Brain, R1E,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1122117	ENSMUST00000143788	Elp5-208	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

299376

TTG...

LPL...

TTG

NMD
sORF
Alternative
InCDS
Overlapping
Intronic

Brain, 3T3, E14,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
294874	ENSMUST00000127437	Elp5-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
1122117	ENSMUST00000143788	Elp5-208	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

17603

207

CTG...

LGL...

CTG

NMD
sORF
Intronic

Brain, Liver, R1E,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
294874	ENSMUST00000127437	Elp5-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1080374	ENSMUST00000138562	Elp5-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

23128

165

TTG...

LRS...

TTG

sORF

MEF, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17846	ENSMUST00000147437	Elp5-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse

295178

GTG...

VEW...

GTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

R1E, B_cell, Neutrophil,
BMDC, Brain, E14,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
294874	ENSMUST00000127437	Elp5-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
1080374	ENSMUST00000138562	Elp5-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
1122117	ENSMUST00000143788	Elp5-208	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

305889

246

CTG...

LCT...

CTG

Alternative
Overlapping
sORF
Upstream

3T3, Brain, R1E,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
447909	ENSMUST00000108595	Elp5-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

19277

108

GTG...

VTT...

GTG

Alternative
Overlapping
sORF
Upstream

3T3, BMDC, Brain,
R1E, Testis, B_cell,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse
17846	ENSMUST00000147437	Elp5-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse
447909	ENSMUST00000108595	Elp5-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

297095

159

TTG...

LRS...

TTG

Alternative
Overlapping
sORF
Upstream

3T3, Brain, R1E,
B_cell, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
447909	ENSMUST00000108595	Elp5-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

295525

231

CTG...

LER...

CTG

Alternative
Overlapping
sORF
Upstream

3T3, Brain, R1E,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
447909	ENSMUST00000108595	Elp5-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

22359

GTG...

VVW...

GTG

sORF
InCDS
Overlapping

MEF, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17846	ENSMUST00000147437	Elp5-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

91403

CTG...

LTL...

CTG

NMD
sORF
Intronic

Brain, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
294874	ENSMUST00000127437	Elp5-204	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

22313

ATG...

MST...

ATG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, MEF,
NSC, R1E, Spleen_B_cell,
v6-5, Liver, Neutrophil,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		12	sORFs_org_Mouse
17846	ENSMUST00000147437	Elp5-209	protein_coding	Ribo-seq		8	sORFs_org_Mouse

299769

ATG...

MKS...

ATG

NMD
sORF
Alternative
Downstream

Brain, Glioma, Liver,
MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
294874	ENSMUST00000127437	Elp5-204	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq	weak	1	Johnstone2016

293334

258

TTG...

LSL...

TTG

Alternative
Overlapping
sORF
Upstream

3T3, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

91217

CTG...

LRR...

CTG

sORF
Alternative
Overlapping
Upstream

MEF, Testis, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17846	ENSMUST00000147437	Elp5-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse
447909	ENSMUST00000108595	Elp5-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

91754

TTG...

LTF...

TTG

Downstream
NMD
sORF
Intronic

B_cell, Testis, Brain,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
18284	ENSMUST00000151766	Elp5-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

22868

210

CTG...

LRI...

CTG

sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17846	ENSMUST00000147437	Elp5-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

418794

165

AAG...

KSF...

AAG

NMD
sORF
Intronic

C2C12, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
294874	ENSMUST00000127437	Elp5-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1080374	ENSMUST00000138562	Elp5-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

315609

165

TTG...

LRS...

TTG

sORF
Overlapping
Upstream

B_cell, Brain, 3T3,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
447909	ENSMUST00000108595	Elp5-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

21988

102

CTG...

LHP...

CTG

Intronic
sORF
Downstream
NMD

Brain, MEF, Testis,
B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18284	ENSMUST00000151766	Elp5-210	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

318878

264

TTG...

LSL...

TTG

Overlapping
sORF
Upstream

3T3, B_cell, Brain,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

937591

114

GTG...

VTT...

GTG

Overlapping
sORF
Upstream

BMDC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1343567

CTG...

LSS...

CTG

InCDS
Overlapping
sORF

E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

312456

GTG...

VSE...

GTG

NMD
sORF
Intronic
InCDS
Overlapping

BMDC, Brain, Liver,
R1E, E14, MEF,
v6-5, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
294874	ENSMUST00000127437	Elp5-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
1080374	ENSMUST00000138562	Elp5-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
1122117	ENSMUST00000143788	Elp5-208	retained_intron	Ribo-seq		4	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

20276

ATG...

MWT...

ATG

Intronic
sORF
Alternative
Downstream
NMD
InCDS
Overlapping

Testis, B_cell, MEF,
v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18284	ENSMUST00000151766	Elp5-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

17887

GTG...

VGS...

GTG

sORF
Alternative
InCDS
Overlapping
Intronic
NMD

Testis, 3T3, R1E,
B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17846	ENSMUST00000147437	Elp5-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1122117	ENSMUST00000143788	Elp5-208	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

295923

261

ATG...

MLS...

ATG

sORF
Alternative
Overlapping
Upstream

E14, 3T3, BMDC,
Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1286185	ENSMUST00000143175	Elp5-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

20803

135

GTG...

VTL...

GTG

Intronic
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1338525

GTG...

VQK...

GTG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1122117	ENSMUST00000143788	Elp5-208	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

659700

CTG...

LAA...

CTG

InCDS
Overlapping
sORF

3T3, E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1129040

CTG...

LCY...

CTG

InCDS
Overlapping
sORF

E14, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

313390

ATG...

MKG...

ATG

Alternative
Downstream
NMD
sORF
InCDS
Overlapping

Glioma, Liver, MEF,
MESC, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq		1	Johnstone2016
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

23527

237

CTG...

LER...

CTG

sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17846	ENSMUST00000147437	Elp5-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

19688

ATG...

MLL...

ATG

Alternative
Downstream
NMD
sORF
Intronic
InCDS
Overlapping

E14, MEF, Testis,
Brain, v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
18284	ENSMUST00000151766	Elp5-210	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

21539

ATG...

MMW...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping
Downstream
NMD

R1E, MEF, v6-5,
B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
18284	ENSMUST00000151766	Elp5-210	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

18283

GTG...

VDP...

GTG

Intronic
sORF
Downstream
NMD

Brain, MEF, Testis,
R1E, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18284	ENSMUST00000151766	Elp5-210	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

22330

267

ATG...

MLS...

ATG

sORF

Testis,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17846	ENSMUST00000147437	Elp5-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse
2991587	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

91523

105

GTG...

VDP...

GTG

Intronic
sORF

Brain, R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
18284	ENSMUST00000151766	Elp5-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

313922

237

CTG...

LER...

CTG

Overlapping
sORF
Upstream

3T3, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

20024

ATG...

MSQ...

ATG

Alternative
Downstream
NMD
sORF
Intronic
InCDS
Overlapping

B_cell, Glioma, Liver,
MEF, MESC, Testis,
3T3, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq	weak	3	sORFs_org_Mouse Johnstone2016
18284	ENSMUST00000151766	Elp5-210	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

1128845

GTG...

VSH...

GTG

InCDS
Overlapping
sORF

E14, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1845543

114

CTG...

LKN...

CTG

Alternative
InCDS
Overlapping
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1288524

ATG...

MET...

ATG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1080374	ENSMUST00000138562	Elp5-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

90683

CTG...

LPF...

CTG

Intronic
sORF

R1E, MEF, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
18284	ENSMUST00000151766	Elp5-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse

654915

CTG...

LHF...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, MEF, R1E,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse
447909	ENSMUST00000108595	Elp5-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

22431

264

TTG...

LSL...

TTG

sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17846	ENSMUST00000147437	Elp5-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

19545

216

GTG...

VRV...

GTG

Intronic
sORF
NMD

R1E, Testis, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
294874	ENSMUST00000127437	Elp5-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

313791

252

CTG...

LCT...

CTG

Overlapping
sORF
Upstream

3T3, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

21030

105

CTG...

LLH...

CTG

Intronic
sORF
Downstream
NMD

Brain, Testis, R1E,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18284	ENSMUST00000151766	Elp5-210	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

304134

CTG...

LKA...

CTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

B_cell, v6-5, BMDC,
Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1122117	ENSMUST00000143788	Elp5-208	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
294874	ENSMUST00000127437	Elp5-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

23146

CTG...

LMS...

CTG

sORF
Alternative
InCDS
Overlapping

BMDC, Brain, Liver,
Neutrophil, Testis, 3T3,
B_cell, E14, MEF,
NSC, R1E, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17846	ENSMUST00000147437	Elp5-209	protein_coding	Ribo-seq		6	sORFs_org_Mouse
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		11	sORFs_org_Mouse

1704303

CTG...

LRR...

CTG

Overlapping
sORF
Upstream

MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1844206

117

GTG...

VVT...

GTG

Overlapping
sORF
Upstream

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

639654

CTG...

LAT...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping
Downstream
NMD

MEF, 3T3, v6-5,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18284	ENSMUST00000151766	Elp5-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
769177	ENSMUST00000142788	Elp5-206	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

295751

GTG...

VSW...

GTG

NMD
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
294874	ENSMUST00000127437	Elp5-204	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

315379

267

ATG...

MLS...

ATG

Overlapping
sORF
Upstream

3T3, BMDC, Brain,
R1E,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse
2991587	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

1294603

117

AAG...

KSF...

AAG

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17846	ENSMUST00000147437	Elp5-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1287972

276

AAG...

KSR...

AAG

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1286185	ENSMUST00000143175	Elp5-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse

22038

117

GTG...

VDQ...

GTG

Intronic
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1292043

ACG...

TAL...

ACG

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1286185	ENSMUST00000143175	Elp5-207	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

313181

210

CTG...

LRI...

CTG

Overlapping
sORF
Upstream

3T3, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293335	ENSMUST00000108594	Elp5-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

90859

159

CTG...

LNT...

CTG

Intronic
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17604	ENSMUST00000123701	Elp5-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

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