Gene NCBI:238799 | MetamORF

Gene

ID CARD

NCBI:238799

Aliases

AU021749
D13Ertd688e, ENSMUSG00000009470, IPO2
Kpnb2, MGI:2681523, MIP
MIP1, NCBI:238799, OFF:Tnpo1
Tnpo1, TRN

Chromosome

Transcripts

62 ORFs
4 known transcripts
108 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

942783

ENSMUST00000179271

Tnpo1-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1303859	90	ATC ...	ISY ...	Ribo-seq	ATC		1	sORFs_org_Mouse	sORF	E14
942782	294	ATG ...	MSG ...	Ribo-seq	ATG		2	sORFs_org_Mouse	sORF	BMDC, E14

668219

ENSMUST00000109399

Tnpo1-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
670488	33	TTG ...	LSS ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, MEF, Neutrophil, v6-5
943847	141	AAG ...	KSV ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC
464123	66	CTG ...	LIK ...	Ribo-seq	CTG	weak	8	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, BMDC, E14, MEF, NSC, v6-5
1608696	165	ATG ...	MLR ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
1576203	144	ATG ...	MSG ...	Ribo-seq	ATG		2	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
671410	84	TTG ...	LWL ...	Ribo-seq	TTG	weak	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF, v6-5
462515	66	ATG ...	MCQ ...	Ribo-seq	ATG	weak	9	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, E14, Glioma, Liver, MEF, MESC, NSC, v6-5
10280	81	ATG ...	MLL ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, MEF, NSC, v6-5
943636	69	TTG ...	LRK ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF, NSC
1610508	135	GTG ...	VSR ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
1608973	45	ATG ...	MLN ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
669521	36	CTG ...	LGD ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, NSC
1041945	30	TTG ...	LGK ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	Neutrophil, NSC, v6-5
944314	102	ATG ...	MIS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
1303553	96	ATT ...	IPW ...	Ribo-seq	ATT		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
668530	69	GTG ...	VSI ...	Ribo-seq	GTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, MEF, NSC, v6-5
338677	51	ATG ...	MMM ...	Ribo-seq	ATG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF, v6-5
942705	126	ATA ...	IYG ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
783969	30	ATG ...	MMT ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF
1449700	45	TTG ...	LKS ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, MEF
942028	153	ATG ...	MRP ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF
941817	30	ATG ...	MIS ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF
670943	78	CTG ...	LLH ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, MEF, NSC, v6-5
463271	33	ATG ...	MMM ...	Ribo-seq	ATG	weak	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF, NSC
1137066	33	ATG ...	MSF ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, v6-5
671150	75	TTG ...	LTY ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF, v6-5
337129	48	ATG ...	MMT ...	Ribo-seq	ATG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF, v6-5
672425	54	CTG ...	LRA ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, MEF, v6-5
1535201	69	CTG ...	LLL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
1534246	72	CTG ...	LLL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
942335	30	ATT ...	IQH ...	Ribo-seq	ATT	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
338845	36	TTG ...	LMM ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF
1609247	42	ATG ...	MKK ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
1611135	162	TTG ...	LRK ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
462479	72	ATG ...	MGL ...	Ribo-seq	ATG	strong	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, MEF, v6-5
1609833	168	GTG ...	VML ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
1610916	81	ATG ...	MRR ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
463866	66	TTG ...	LRR ...	Ribo-seq	TTG	moderate	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, MEF, v6-5
1347456	36	GTG ...	VMS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
464041	45	CTG ...	LAS ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF, v6-5
942838	108	AAG ...	KSV ...	Ribo-seq	AAG		2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC, E14
1136611	66	CTG ...	LLP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
1303588	45	TTG ...	LGK ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	NSC
462882	51	TTG ...	LCV ...	Ribo-seq	TTG	weak	9	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, BMDC, E14, MEF, NSC, v6-5
668218	75	TTG ...	LHV ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, MEF, NSC, v6-5
670208	63	TTG ...	LPQ ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
335365	45	ATG ...	MTK ...	Ribo-seq	ATG	moderate	7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF, NSC, v6-5

10281

ENSMUST00000109401

Tnpo1-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1305176	237	AGG ...	RPR ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	E14
1136611	66	CTG ...	LLP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
463271	33	ATG ...	MMM ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
1137066	33	ATG ...	MSF ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
1302141	96	ATT ...	ISG ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	E14
462515	66	ATG ...	MCQ ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
338677	51	ATG ...	MMM ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, R1E
1534246	72	CTG ...	LLL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
669521	36	CTG ...	LGD ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, MEF, R1E
464123	66	CTG ...	LIK ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
783969	30	ATG ...	MMT ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
1347456	36	GTG ...	VMS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
463866	66	TTG ...	LRR ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, R1E
668530	69	GTG ...	VSI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
338845	36	TTG ...	LMM ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain
462882	51	TTG ...	LCV ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, R1E
671150	75	TTG ...	LTY ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, R1E
335365	45	ATG ...	MTK ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, R1E
10280	81	ATG ...	MLL ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, R1E, Skin_tumor
1304271	81	AGG ...	RPR ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Overlapping sORF Upstream	E14
464041	45	CTG ...	LAS ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, R1E
670488	33	TTG ...	LSS ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
672425	54	CTG ...	LRA ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, R1E
1535201	69	CTG ...	LLL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
462479	72	ATG ...	MGL ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
1535192	66	CTG ...	LLS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
337129	48	ATG ...	MMT ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, R1E
671410	84	TTG ...	LWL ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, R1E
1535461	45	GTG ...	VFC ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
1041945	30	TTG ...	LGK ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, MEF, R1E
670208	63	TTG ...	LPQ ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
670943	78	CTG ...	LLH ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
668218	75	TTG ...	LHV ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, R1E

461924

ENSMUST00000179301

Tnpo1-204

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
338845	36	TTG ...	LMM ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	sORF	3T3, Spleen_B_cell
462515	66	ATG ...	MCQ ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	sORF	Spleen_B_cell
671150	75	TTG ...	LTY ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	sORF	3T3, E14
1041945	30	TTG ...	LGK ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	E14
463271	33	ATG ...	MMM ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	sORF	Spleen_B_cell
671410	84	TTG ...	LWL ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	sORF	3T3, E14
1304825	84	AGG ...	RDT ...	Ribo-seq	AGG		1	sORFs_org_Mouse	sORF	E14
462882	51	TTG ...	LCV ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	sORF	Spleen_B_cell
1304537	54	ACG ...	TMM ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	sORF	E14
464041	45	CTG ...	LAS ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	sORF	3T3, E14, Spleen_B_cell
1302581	60	AGG ...	RKT ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	sORF	E14
1305817	51	ATA ...	IAT ...	Ribo-seq	ATA		1	sORFs_org_Mouse	sORF	E14
463866	66	TTG ...	LRR ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	sORF	Spleen_B_cell
462479	72	ATG ...	MGL ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	sORF	Spleen_B_cell
464123	66	CTG ...	LIK ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	sORF	Spleen_B_cell
335365	45	ATG ...	MTK ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	sORF	3T3, Spleen_B_cell
942705	126	ATA ...	IYG ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	sORF	E14
670208	63	TTG ...	LPQ ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	sORF	3T3
1304621	63	ATA ...	IKR ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	sORF	E14
10280	81	ATG ...	MLL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	E14
1302706	63	ATC ...	ISS ...	Ribo-seq	ATC		1	sORFs_org_Mouse	sORF	E14
1304887	51	ATA ...	IAT ...	Ribo-seq	ATA		1	sORFs_org_Mouse	sORF	E14
1304607	57	AGG ...	RLL ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	sORF	E14
1303588	45	TTG ...	LGK ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	E14
337129	48	ATG ...	MMT ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	sORF	3T3, Spleen_B_cell
338677	51	ATG ...	MMM ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	sORF	3T3, Spleen_B_cell

3023696

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1608696	165	ATG ...	MLR ...	Predicted	ATG		1	Samandi2017	sORF
1576203	144	ATG ...	MSG ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

62 ORFs
4 known transcripts
108 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

1303859

ATC...

ISY...

ATC

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
942783	ENSMUST00000179271	Tnpo1-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

670488

TTG...

LSS...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, MEF,
Neutrophil, v6-5, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1305176

237

AGG...

RPR...

AGG

Alternative
Overlapping
sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

943847

141

AAG...

KSV...

AAG

Alternative
Downstream
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

942782

294

ATG...

MSG...

ATG

sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
942783	ENSMUST00000179271	Tnpo1-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse

464123

CTG...

LIK...

CTG

InCDS
Overlapping
sORF

3T3, BMDC, E14,
MEF, NSC, v6-5,
R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	weak	8	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1136611

CTG...

LLP...

CTG

Alternative
InCDS
Overlapping
sORF

E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1608696

165

ATG...

MLR...

ATG

Alternative
InCDS
Overlapping
sORF

Glioma, Liver, MEF,
MESC,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse Johnstone2016
3023696	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

338845

TTG...

LMM...

TTG

sORF
Alternative
InCDS
Overlapping

3T3, Spleen_B_cell, BMDC,
MEF, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

462515

ATG...

MCQ...

ATG

sORF
Alternative
InCDS
Overlapping

Spleen_B_cell, 3T3, E14,
Glioma, Liver, MEF,
MESC, NSC, v6-5,
Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	weak	9	sORFs_org_Mouse Johnstone2016
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

1576203

144

ATG...

MSG...

ATG

Alternative
InCDS
Overlapping
sORF

Glioma, Liver, MEF,
MESC,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse Johnstone2016
3023696	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

671150

TTG...

LTY...

TTG

sORF
Alternative
InCDS
Overlapping

3T3, E14, BMDC,
MEF, v6-5, B_cell,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

1041945

TTG...

LGK...

TTG

sORF
InCDS
Overlapping

E14, Neutrophil, NSC,
v6-5, Brain, MEF,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

671410

TTG...

LWL...

TTG

Alternative
InCDS
Overlapping
sORF

BMDC, MEF, v6-5,
3T3, E14, B_cell,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

463271

ATG...

MMM...

ATG

sORF
Alternative
InCDS
Overlapping

Spleen_B_cell, B_cell, BMDC,
MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse

10280

ATG...

MLL...

ATG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, E14,
MEF, NSC, v6-5,
B_cell, R1E, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

943636

TTG...

LRK...

TTG

Alternative
InCDS
Overlapping
sORF

BMDC, MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse

1610508

135

GTG...

VSR...

GTG

Alternative
InCDS
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

1137066

ATG...

MSF...

ATG

Alternative
InCDS
Overlapping
sORF

Brain, R1E, E14,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

1304825

AGG...

RDT...

AGG

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1608973

ATG...

MLN...

ATG

Alternative
InCDS
Overlapping
sORF

Glioma, Liver, MEF,
MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse Johnstone2016

462882

TTG...

LCV...

TTG

sORF
InCDS
Overlapping

Spleen_B_cell, Brain, R1E,
3T3, BMDC, E14,
MEF, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	weak	9	sORFs_org_Mouse

1302141

ATT...

ISG...

ATT

Alternative
Overlapping
sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1304537

ACG...

TMM...

ACG

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

669521

CTG...

LGD...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, NSC, B_cell,
MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

944314

102

ATG...

MIS...

ATG

Alternative
InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1303553

ATT...

IPW...

ATT

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

464041

CTG...

LAS...

CTG

sORF
Alternative
InCDS
Overlapping

3T3, E14, Spleen_B_cell,
Brain, R1E, BMDC,
MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse

668530

GTG...

VSI...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, E14,
MEF, NSC, v6-5,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq		8	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

338677

ATG...

MMM...

ATG

Alternative
InCDS
Overlapping
sORF

BMDC, MEF, v6-5,
B_cell, Brain, R1E,
3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

942705

126

ATA...

IYG...

ATA

Alternative
InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

783969

ATG...

MMT...

ATG

Alternative
InCDS
Overlapping
sORF

BMDC, MEF, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1449700

TTG...

LKS...

TTG

InCDS
Overlapping
sORF

BMDC, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse

942028

153

ATG...

MRP...

ATG

Alternative
InCDS
Overlapping
sORF

BMDC, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse

941817

ATG...

MIS...

ATG

Alternative
InCDS
Overlapping
sORF

BMDC, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

670943

CTG...

LLH...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, E14,
MEF, NSC, v6-5,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1534246

CTG...

LLL...

CTG

Alternative
InCDS
Overlapping
sORF

Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1302581

AGG...

RKT...

AGG

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1305817

ATA...

IAT...

ATA

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

337129

ATG...

MMT...

ATG

Alternative
InCDS
Overlapping
sORF

BMDC, MEF, v6-5,
B_cell, Brain, R1E,
3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

463866

TTG...

LRR...

TTG

sORF
Alternative
InCDS
Overlapping

Spleen_B_cell, B_cell, R1E,
3T3, BMDC, MEF,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse

672425

CTG...

LRA...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, MEF,
v6-5, B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

1535201

CTG...

LLL...

CTG

Alternative
InCDS
Overlapping
sORF

MEF, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

462479

ATG...

MGL...

ATG

sORF
Alternative
InCDS
Overlapping

Spleen_B_cell, 3T3, BMDC,
MEF, v6-5, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	strong	6	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

942335

ATT...

IQH...

ATT

Alternative
InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

1347456

GTG...

VMS...

GTG

Alternative
InCDS
Overlapping
sORF

Brain, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1609247

ATG...

MKK...

ATG

Alternative
InCDS
Overlapping
sORF

Glioma, Liver, MEF,
MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016

335365

ATG...

MTK...

ATG

sORF
Alternative
InCDS
Overlapping

3T3, Spleen_B_cell, B_cell,
Brain, R1E, BMDC,
MEF, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	7	sORFs_org_Mouse

1611135

162

TTG...

LRK...

TTG

Alternative
InCDS
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

670208

TTG...

LPQ...

TTG

sORF
Alternative
InCDS
Overlapping

3T3, E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1609833

168

GTG...

VML...

GTG

Alternative
InCDS
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

1304271

AGG...

RPR...

AGG

Overlapping
sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1304621

ATA...

IKR...

ATA

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1610916

ATG...

MRR...

ATG

Alternative
InCDS
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

1535192

CTG...

LLS...

CTG

Alternative
InCDS
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

942838

108

AAG...

KSV...

AAG

Alternative
Downstream
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1302706

ATC...

ISS...

ATC

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1304887

ATA...

IAT...

ATA

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1303588

TTG...

LGK...

TTG

Alternative
InCDS
Overlapping
sORF

NSC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1535461

GTG...

VFC...

GTG

InCDS
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1304607

AGG...

RLL...

AGG

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
461924	ENSMUST00000179301	Tnpo1-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

668218

TTG...

LHV...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, E14,
MEF, NSC, v6-5,
B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
668219	ENSMUST00000109399	Tnpo1-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse
10281	ENSMUST00000109401	Tnpo1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

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