Gene NCBI:22375 | MetamORF

Gene

ID CARD

NCBI:22375

Aliases

ENSMUSG00000021266
MGI:104630, NCBI:22375, OFF:Wars
TrpRS, Wars, Wars1
WRS

Chromosome

Transcripts

121 ORFs
7 known transcripts
230 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

9637

ENSMUST00000109848

Wars-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
322093	87	ATG ...	MHF ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
331005	99	TTG ...	LWI ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, v6-5
460698	150	CTG ...	LVG ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	B_cell, MEF, Spleen_B_cell
1040639	54	GTG ...	VLT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF Upstream	Neutrophil, R1E
939599	90	CTG ...	LVF ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF Upstream	BMDC, E14
331199	84	GTG ...	VAS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
666317	60	CTG ...	LAK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
329224	90	TTG ...	LPV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
667054	51	ATG ...	MTS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	v6-5
331273	171	CTG ...	LAA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, v6-5
779147	66	GTG ...	VPV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
1608116	66	CTG ...	LNL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF Upstream	MEF
329432	87	TTG ...	LKM ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
329582	132	GTG ...	VTL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, v6-5
667843	159	GTG ...	VPV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
666678	126	CTG ...	LTR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
330536	171	ATG ...	MKI ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
329039	126	CTG ...	LMP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, v6-5
460582	147	GTG ...	VGP ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, B_cell, MEF, Spleen_B_cell
9889	33	ATG ...	MTT ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Skin_tumor
1040380	60	TTG ...	LGV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF Upstream	Neutrophil
330427	177	ATG ...	MPM ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
329360	51	CTG ...	LIL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
329356	45	TTG ...	LSI ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
328886	159	CTG ...	LGT ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, v6-5
329879	81	ATG ...	MTT ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
667902	69	GTG ...	VQK ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, v6-5
9939	33	CTG ...	LTT ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Skin_tumor
329860	123	ATG ...	MPQ ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, v6-5
666788	153	GTG ...	VTP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
9636	39	TTG ...	LKM ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Skin_tumor
1040660	51	CTG ...	LTG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF Upstream	Neutrophil
330274	144	CTG ...	LGE ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, v6-5
330177	105	ATG ...	MQR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
9727	57	ATG ...	MCL ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Skin_tumor
329366	144	GTG ...	VTA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell

320710

ENSMUST00000160477

Wars-202

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
322466	96	CTG ...	LIA ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain, R1E
326190	114	TTG ...	LTL ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, Brain, MEF, R1E
324329	177	CTG ...	LSQ ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative NMD Overlapping sORF Upstream	B_cell, Brain, R1E
327015	261	TTG ...	LLS ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Downstream NMD sORF	Brain, R1E
1705381	36	TTG ...	LFP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
323007	36	CTG ...	LGH ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain, R1E
938825	48	AGG ...	RKR ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC
322385	108	CTG ...	LDA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, Brain, R1E
326653	168	CTG ...	LLN ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative NMD Overlapping sORF Upstream	B_cell, R1E
664183	78	CTG ...	LEE ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
321050	114	CTG ...	LSR ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, Brain, R1E, v6-5
321185	90	ATG ...	MQR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Downstream NMD sORF	B_cell, Brain
780064	117	GTG ...	VCL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell
321279	33	GTG ...	VEG ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, Brain, MEF
327643	117	CTG ...	LLS ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, R1E, v6-5
321213	54	TTG ...	LQV ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain, R1E
1706242	111	CTG ...	LCW ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
780111	57	CTG ...	LTF ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Downstream NMD sORF	B_cell, MEF, R1E
938681	48	TTG ...	LGV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative NMD sORF Upstream	BMDC
660525	30	TTG ...	LEA ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E
662107	39	CTG ...	LPS ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF, R1E
940273	57	AGG ...	RST ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC
322541	42	ATG ...	MDG ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain, MEF, R1E, v6-5
321622	114	GTG ...	VEE ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Downstream NMD sORF	B_cell, Brain, MEF, R1E
325465	69	GTG ...	VAS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Downstream NMD sORF	Brain
323761	90	GTG ...	VCF ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Downstream NMD sORF	B_cell, Brain, MEF, R1E
419978	54	GTG ...	VAE ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative NMD sORF Upstream	BMDC, C2C12
326124	108	CTG ...	LEQ ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, Brain, MEF, R1E
327575	174	GTG ...	VFN ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, Brain, MEF, R1E
1131589	150	GTG ...	VSP ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E, v6-5
939275	66	ATC ...	ILN ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC
780600	165	ATG ...	MTP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	NMD Overlapping sORF Upstream	B_cell
326781	66	ATG ...	MCS ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	Downstream NMD sORF	B_cell, Brain, MEF, R1E
325082	78	GTG ...	VDV ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Downstream NMD sORF	B_cell, Brain, MEF, R1E
322093	87	ATG ...	MHF ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
25118	159	TTG ...	LVI ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, Brain, MEF, R1E
939348	54	ATA ...	ISS ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC
323749	93	CTG ...	LHL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, Brain, R1E
779454	99	CTG ...	LQA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, R1E
780561	180	CTG ...	LQQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD Overlapping sORF Upstream	B_cell
9727	57	ATG ...	MCL ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	Downstream NMD sORF	B_cell, Brain, MEF, R1E
9636	39	TTG ...	LKM ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, Brain, MEF, R1E
458036	33	CTG ...	LTR ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, R1E, v6-5
321770	165	CTG ...	LNT ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative NMD Overlapping sORF Upstream	B_cell, Brain, R1E
660800	63	CTG ...	LWR ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
660420	45	GTG ...	VAS ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	B_cell, MEF
328453	126	CTG ...	LWK ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, Brain, MEF, R1E
9939	33	CTG ...	LTT ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Downstream NMD sORF	B_cell, Brain, MEF, R1E
779147	66	GTG ...	VPV ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E, v6-5
25933	165	GTG ...	VPL ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, Brain, MEF, R1E
327900	48	GTG ...	VAT ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain, R1E
1297705	42	TTG ...	LGA ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
9889	33	ATG ...	MTT ...	Ribo-seq	ATG		5	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, BMDC, Brain, MEF, R1E
327106	33	GTG ...	VPL ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, Brain, MEF, R1E
327214	48	GTG ...	VKE ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain, R1E
322928	141	CTG ...	LQA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative NMD Overlapping sORF Upstream	B_cell, Brain, R1E
779292	42	TTG ...	LQF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E
325647	39	CTG ...	LWL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain
938839	54	CTG ...	LNL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative NMD sORF Upstream	BMDC
1706019	30	GTG ...	VKW ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
780351	105	TTG ...	LSL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, R1E
324676	75	CTG ...	LYT ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	B_cell, Brain, R1E
459098	60	GTG ...	VTP ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC, R1E, v6-5

326654

ENSMUST00000161410

Wars-205

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
666721	141	TTG ...	LDY ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3
327643	117	CTG ...	LLS ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
1297821	51	ATT ...	ITP ...	Ribo-seq	ATT	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
330536	171	ATG ...	MKI ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
322928	141	CTG ...	LQA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Brain, E14
323749	93	CTG ...	LHL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
321050	114	CTG ...	LSR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
329360	51	CTG ...	LIL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, MEF
331273	171	CTG ...	LAA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain
660525	30	TTG ...	LEA ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
330177	105	ATG ...	MQR ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF
329860	123	ATG ...	MPQ ...	Ribo-seq	ATG		4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, MEF
1297548	90	AAG ...	KPA ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	E14
322093	87	ATG ...	MHF ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14
1297705	42	TTG ...	LGA ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
9727	57	ATG ...	MCL ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC
329224	90	TTG ...	LPV ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain
321770	165	CTG ...	LNT ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, C2C12
331005	99	TTG ...	LWI ...	Ribo-seq	TTG		4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, MEF
331199	84	GTG ...	VAS ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, MEF
327106	33	GTG ...	VPL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
664183	78	CTG ...	LEE ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14
667843	159	GTG ...	VPV ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14
329879	81	ATG ...	MTT ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14
1300428	165	ATA ...	IRS ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
9939	33	CTG ...	LTT ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC
329356	45	TTG ...	LSI ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14
329432	87	TTG ...	LKM ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14
322541	42	ATG ...	MDG ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
329582	132	GTG ...	VTL ...	Ribo-seq	GTG		4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, MEF
1300100	102	ATT ...	ILW ...	Ribo-seq	ATT		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
667902	69	GTG ...	VQK ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain
321279	33	GTG ...	VEG ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
1298016	108	ATT ...	ILW ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
329366	144	GTG ...	VTA ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
458036	33	CTG ...	LTR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
1299694	51	AGG ...	RGA ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
666317	60	CTG ...	LAK ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
324329	177	CTG ...	LSQ ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, E14
330274	144	CTG ...	LGE ...	Ribo-seq	CTG		4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, MEF
9889	33	ATG ...	MTT ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14
666678	126	CTG ...	LTR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF
666788	153	GTG ...	VTP ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14
326653	168	CTG ...	LLN ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Brain, E14
9636	39	TTG ...	LKM ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14
330427	177	ATG ...	MPM ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain
667054	51	ATG ...	MTS ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, BMDC
328886	159	CTG ...	LGT ...	Ribo-seq	CTG		4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain
660420	45	GTG ...	VAS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
660800	63	CTG ...	LWR ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
662107	39	CTG ...	LPS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
329039	126	CTG ...	LMP ...	Ribo-seq	CTG		5	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, MEF
326781	66	ATG ...	MCS ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14
1297926	66	ATA ...	ILW ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
667409	39	TTG ...	LFS ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, BMDC
327900	48	GTG ...	VAT ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3

458037

ENSMUST00000161154

Wars-204

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
326653	168	CTG ...	LLN ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Overlapping sORF Upstream	Liver, MEF, Neutrophil, Spleen_B_cell, v6-5
9727	57	ATG ...	MCL ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, v6-5
321279	33	GTG ...	VEG ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, Spleen_B_cell
779147	66	GTG ...	VPV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
329860	123	ATG ...	MPQ ...	Ribo-seq	ATG		5	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC, NSC, Spleen_B_cell
329224	90	TTG ...	LPV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
330177	105	ATG ...	MQR ...	Ribo-seq	ATG		2	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
323749	93	CTG ...	LHL ...	Ribo-seq	CTG		5	sORFs_org_Mouse	InCDS Overlapping sORF	Liver, MEF, NSC, Spleen_B_cell, v6-5
321185	90	ATG ...	MQR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, v6-5
325465	69	GTG ...	VAS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
9636	39	TTG ...	LKM ...	Ribo-seq	TTG		4	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, Spleen_B_cell, v6-5
326781	66	ATG ...	MCS ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, v6-5
322093	87	ATG ...	MHF ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC, v6-5
321770	165	CTG ...	LNT ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Overlapping sORF Upstream	Liver, MEF, Neutrophil, Spleen_B_cell, v6-5
9889	33	ATG ...	MTT ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, Spleen_B_cell, v6-5
940836	168	AAG ...	KAF ...	Ribo-seq	AAG		1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
330274	144	CTG ...	LGE ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC
328886	159	CTG ...	LGT ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC, Spleen_B_cell
322928	141	CTG ...	LQA ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Overlapping sORF Upstream	Liver, MEF, NSC, Spleen_B_cell, v6-5
324329	177	CTG ...	LSQ ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Overlapping sORF Upstream	Liver, MEF, Neutrophil, Spleen_B_cell, v6-5
458036	33	CTG ...	LTR ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, Spleen_B_cell
778713	138	GTG ...	VTL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
664183	78	CTG ...	LEE ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	v6-5
330427	177	ATG ...	MPM ...	Ribo-seq	ATG		1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
459098	60	GTG ...	VTP ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	E14, Spleen_B_cell
779229	129	ATG ...	MPQ ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
666788	153	GTG ...	VTP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
331199	84	GTG ...	VAS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
780020	132	CTG ...	LMP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
9939	33	CTG ...	LTT ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, v6-5
322541	42	ATG ...	MDG ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC, NSC, Spleen_B_cell
329432	87	TTG ...	LKM ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	NSC
780265	165	CTG ...	LGT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
329582	132	GTG ...	VTL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC
331273	171	CTG ...	LAA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Spleen_B_cell
325647	39	CTG ...	LWL ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, NSC
329366	144	GTG ...	VTA ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	R1E, v6-5
327106	33	GTG ...	VPL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	v6-5
1605969	75	TTG ...	LPV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
331005	99	TTG ...	LWI ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Spleen_B_cell
329039	126	CTG ...	LMP ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC, Spleen_B_cell
329879	81	ATG ...	MTT ...	Ribo-seq	ATG		2	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC, NSC
780247	150	CTG ...	LGE ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
459849	177	CTG ...	LAA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, Spleen_B_cell
666721	141	TTG ...	LDY ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	B_cell

25119

ENSMUST00000162952

Wars-207

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
321185	90	ATG ...	MQR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	E14
328453	126	CTG ...	LWK ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain
779454	99	CTG ...	LQA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
1297199	30	TTG ...	LSI ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	E14
325647	39	CTG ...	LWL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
1296843	165	AGG ...	RNV ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Intronic sORF	E14
25118	159	TTG ...	LVI ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Intronic sORF	Brain, Testis
1298267	153	ATC ...	IQM ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Intronic sORF	E14
1296957	156	GTG ...	VKI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	E14
9939	33	CTG ...	LTT ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
25933	165	GTG ...	VPL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	Brain, Testis
1298992	120	AAG ...	KDL ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Intronic sORF	E14
326190	114	TTG ...	LTL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	Brain
326124	108	CTG ...	LEQ ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain

938718

ENSMUST00000162748

Wars-206

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
327015	261	TTG ...	LLS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain
939752	96	ATT ...	ILP ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC
997264	144	CTG ...	LFN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain
938717	150	CTG ...	LEL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	BMDC, Brain
939558	267	AAG ...	KML ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC
939129	39	CTG ...	LAG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative NMD sORF Upstream	BMDC
940248	132	ATA ...	IAT ...	Ribo-seq	ATA		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	BMDC

778714

ENSMUST00000160974

Wars-203

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
780020	132	CTG ...	LMP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
779229	129	ATG ...	MPQ ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	B_cell
778713	138	GTG ...	VTL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
662107	39	CTG ...	LPS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
780247	150	CTG ...	LGE ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
780265	165	CTG ...	LGT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
327015	261	TTG ...	LLS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
459849	177	CTG ...	LAA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
779292	42	TTG ...	LQF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	B_cell

3371307

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
329860	123	ATG ...	MPQ ...	Predicted	ATG		1	Samandi2017	sORF
330177	105	ATG ...	MQR ...	Predicted	ATG		1	Samandi2017	sORF
330427	177	ATG ...	MPM ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

121 ORFs
7 known transcripts
230 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

322093

ATG...

MHF...

ATG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

Brain, Glioma, Liver,
MEF, MESC, v6-5,
3T3, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

322466

CTG...

LIA...

CTG

Alternative
Downstream
NMD
sORF

Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse

326190

114

TTG...

LTL...

TTG

Alternative
Downstream
NMD
sORF
Intronic

B_cell, Brain, MEF,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
25119	ENSMUST00000162952	Wars-207	retained_intron	Ribo-seq		2	sORFs_org_Mouse

331005

TTG...

LWI...

TTG

InCDS
Overlapping
sORF
Alternative

B_cell, v6-5, 3T3,
Brain, MEF, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		4	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse

666721

141

TTG...

LDY...

TTG

Alternative
Overlapping
sORF
Upstream

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

326653

168

CTG...

LLN...

CTG

Overlapping
sORF
Upstream
Alternative
NMD

Liver, MEF, Neutrophil,
Spleen_B_cell, v6-5, B_cell,
R1E, 3T3, Brain,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		5	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		3	sORFs_org_Mouse

460698

150

CTG...

LVG...

CTG

Alternative
Overlapping
sORF
Upstream

B_cell, MEF, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

321185

ATG...

MQR...

ATG

Intronic
sORF
Downstream
NMD
Alternative
InCDS
Overlapping

E14, B_cell, Brain,
MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
25119	ENSMUST00000162952	Wars-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse

327015

261

TTG...

LLS...

TTG

Alternative
Downstream
NMD
sORF
Intronic

Brain, R1E, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
938718	ENSMUST00000162748	Wars-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
778714	ENSMUST00000160974	Wars-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

324329

177

CTG...

LSQ...

CTG

Alternative
NMD
Overlapping
sORF
Upstream

B_cell, Brain, R1E,
Liver, MEF, Neutrophil,
Spleen_B_cell, v6-5, 3T3,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		5	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse

327643

117

CTG...

LLS...

CTG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

3T3, Brain, B_cell,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	weak	3	sORFs_org_Mouse

9727

ATG...

MCL...

ATG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

MEF, v6-5, 3T3,
BMDC, B_cell, Brain,
R1E, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	weak	4	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

321279

GTG...

VEG...

GTG

InCDS
Overlapping
sORF
Alternative
Downstream
NMD

MEF, Spleen_B_cell, B_cell,
Brain, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	moderate	3	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1297821

ATT...

ITP...

ATT

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1705381

TTG...

LFP...

TTG

Alternative
Downstream
NMD
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

330536

171

ATG...

MKI...

ATG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		3	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

323007

CTG...

LGH...

CTG

Alternative
Downstream
NMD
sORF

Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

322928

141

CTG...

LQA...

CTG

Alternative
Overlapping
sORF
Upstream
NMD

3T3, Brain, E14,
Liver, MEF, NSC,
Spleen_B_cell, v6-5, B_cell,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		3	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		5	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

938825

AGG...

RKR...

AGG

Alternative
Downstream
NMD
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

939752

ATT...

ILP...

ATT

Alternative
Downstream
NMD
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
938718	ENSMUST00000162748	Wars-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

322385

108

CTG...

LDA...

CTG

Alternative
Downstream
NMD
sORF

B_cell, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

779147

GTG...

VPV...

GTG

InCDS
Overlapping
sORF
Alternative
Downstream
NMD

E14, B_cell, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

329860

123

ATG...

MPQ...

ATG

Alternative
InCDS
Overlapping
sORF

Glioma, Liver, MEF,
MESC, NSC, Spleen_B_cell,
3T3, Brain,
B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		5	sORFs_org_Mouse Johnstone2016
3371307	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		4	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

323749

CTG...

LHL...

CTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, Brain, Liver,
MEF, NSC, Spleen_B_cell,
v6-5, B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		5	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

1040639

GTG...

VLT...

GTG

sORF
Upstream

Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

664183

CTG...

LEE...

CTG

Alternative
Downstream
NMD
sORF
InCDS
Overlapping

MEF, v6-5, 3T3,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

939599

CTG...

LVF...

CTG

sORF
Upstream

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

780020

132

CTG...

LMP...

CTG

Intronic
sORF
InCDS
Overlapping

B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
778714	ENSMUST00000160974	Wars-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

328453

126

CTG...

LWK...

CTG

Intronic
sORF
Alternative
Downstream
NMD

Brain, B_cell, MEF,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
25119	ENSMUST00000162952	Wars-207	retained_intron	Ribo-seq		2	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

321050

114

CTG...

LSR...

CTG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

3T3, B_cell, Brain,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	weak	4	sORFs_org_Mouse

329224

TTG...

LPV...

TTG

InCDS
Overlapping
sORF
Alternative

MEF, B_cell, 3T3,
BMDC, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		4	sORFs_org_Mouse

779454

CTG...

LQA...

CTG

Intronic
sORF
Alternative
Downstream
NMD

Brain, B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
25119	ENSMUST00000162952	Wars-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

997264

144

CTG...

LFN...

CTG

InCDS
NMD
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
938718	ENSMUST00000162748	Wars-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

331199

GTG...

VAS...

GTG

Alternative
InCDS
Overlapping
sORF

B_cell, 3T3, BMDC,
Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		5	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

330177

105

ATG...

MQR...

ATG

InCDS
Overlapping
sORF
Alternative

Glioma, Liver, MEF,
MESC, 3T3, BMDC,
Brain, E14,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse Johnstone2016
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		6	sORFs_org_Mouse
3371307	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

779229

129

ATG...

MPQ...

ATG

Intronic
sORF
InCDS
Overlapping

B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
778714	ENSMUST00000160974	Wars-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

778713

138

GTG...

VTL...

GTG

Intronic
sORF
InCDS
Overlapping

B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
778714	ENSMUST00000160974	Wars-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse

780064

117

GTG...

VCL...

GTG

Alternative
Downstream
NMD
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

329360

CTG...

LIL...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, MEF,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		3	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

331273

171

CTG...

LAA...

CTG

InCDS
Overlapping
sORF
Alternative

3T3, Brain, B_cell,
v6-5, MEF, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		3	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		3	sORFs_org_Mouse

660525

TTG...

LEA...

TTG

InCDS
Overlapping
sORF
Alternative
Downstream
NMD

3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

662107

CTG...

LPS...

CTG

Intronic
sORF
Alternative
Downstream
NMD
InCDS
Overlapping

Brain, MEF, R1E,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
778714	ENSMUST00000160974	Wars-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

325465

GTG...

VAS...

GTG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

E14, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

321213

TTG...

LQV...

TTG

Alternative
Downstream
NMD
sORF

Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

9636

TTG...

LKM...

TTG

InCDS
Overlapping
sORF
Alternative
Downstream
NMD

MEF, Spleen_B_cell, v6-5,
B_cell, Brain, R1E,
3T3, E14, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		4	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1706242

111

CTG...

LCW...

CTG

Alternative
Downstream
NMD
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

326781

ATG...

MCS...

ATG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

MEF, v6-5, B_cell,
Brain, R1E, 3T3,
BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	moderate	4	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse

666317

CTG...

LAK...

CTG

Alternative
InCDS
Overlapping
sORF

B_cell, 3T3, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse

780111

CTG...

LTF...

CTG

Downstream
NMD
sORF

B_cell, MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

938681

TTG...

LGV...

TTG

Alternative
NMD
sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

321770

165

CTG...

LNT...

CTG

Overlapping
sORF
Upstream
Alternative
NMD

Liver, MEF, Neutrophil,
Spleen_B_cell, v6-5, 3T3,
C2C12, B_cell, Brain,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		5	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

9889

ATG...

MTT...

ATG

InCDS
Overlapping
sORF
Alternative
Downstream
NMD

MEF, Spleen_B_cell, v6-5,
Skin_tumor, 3T3, E14,
B_cell, BMDC, Brain,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		3	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse

780247

150

CTG...

LGE...

CTG

Intronic
sORF
InCDS
Overlapping

B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
778714	ENSMUST00000160974	Wars-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

940836

168

AAG...

KAF...

AAG

InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1297199

TTG...

LSI...

TTG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
25119	ENSMUST00000162952	Wars-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1297548

AAG...

KPA...

AAG

Alternative
Overlapping
sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

330274

144

CTG...

LGE...

CTG

Alternative
InCDS
Overlapping
sORF

MEF, NSC, 3T3,
Brain, B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		3	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		4	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

940273

AGG...

RST...

AGG

Alternative
Downstream
NMD
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

325647

CTG...

LWL...

CTG

Intronic
sORF
InCDS
Overlapping
Alternative
Downstream
NMD

Brain, MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
25119	ENSMUST00000162952	Wars-207	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

322541

ATG...

MDG...

ATG

Alternative
Downstream
NMD
sORF
InCDS
Overlapping

Brain, MEF, R1E,
v6-5, 3T3, Glioma,
Liver, MESC, NSC,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	moderate	4	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse Johnstone2016

328886

159

CTG...

LGT...

CTG

Alternative
InCDS
Overlapping
sORF

MEF, NSC, Spleen_B_cell,
B_cell, v6-5, 3T3,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		4	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		4	sORFs_org_Mouse

667054

ATG...

MTS...

ATG

InCDS
Overlapping
sORF

v6-5, 3T3, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1297705

TTG...

LGA...

TTG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

321622

114

GTG...

VEE...

GTG

Downstream
NMD
sORF

B_cell, Brain, MEF,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

458036

CTG...

LTR...

CTG

InCDS
Overlapping
sORF
Alternative
Downstream
NMD

E14, MEF, Spleen_B_cell,
3T3, B_cell, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		3	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

323761

GTG...

VCF...

GTG

Downstream
NMD
sORF

B_cell, Brain, MEF,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

938717

150

CTG...

LEL...

CTG

InCDS
NMD
Overlapping
sORF

BMDC, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
938718	ENSMUST00000162748	Wars-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

939558

267

AAG...

KML...

AAG

Alternative
Downstream
NMD
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
938718	ENSMUST00000162748	Wars-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

327106

GTG...

VPL...

GTG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

3T3, v6-5, B_cell,
Brain, MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	weak	4	sORFs_org_Mouse

419978

GTG...

VAE...

GTG

Alternative
NMD
sORF
Upstream

BMDC, C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

939129

CTG...

LAG...

CTG

Alternative
NMD
sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
938718	ENSMUST00000162748	Wars-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1296843

165

AGG...

RNV...

AGG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
25119	ENSMUST00000162952	Wars-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

330427

177

ATG...

MPM...

ATG

Alternative
InCDS
Overlapping
sORF

Glioma, Liver, MEF,
MESC, B_cell, 3T3,
BMDC, Brain,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		1	Johnstone2016
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		4	sORFs_org_Mouse
3371307	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

326124

108

CTG...

LEQ...

CTG

Alternative
Downstream
NMD
sORF
Intronic

B_cell, Brain, MEF,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
25119	ENSMUST00000162952	Wars-207	retained_intron	Ribo-seq		2	sORFs_org_Mouse

327575

174

GTG...

VFN...

GTG

Alternative
Downstream
NMD
sORF

B_cell, Brain, MEF,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

25118

159

TTG...

LVI...

TTG

Intronic
sORF
Alternative
Downstream
NMD

Brain, Testis, B_cell,
MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
25119	ENSMUST00000162952	Wars-207	retained_intron	Ribo-seq		3	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

667843

159

GTG...

VPV...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, E14,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		3	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

329879

ATG...

MTT...

ATG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, E14,
B_cell, Glioma, Liver,
MEF, MESC, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		3	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse Johnstone2016

459098

GTG...

VTP...

GTG

InCDS
Overlapping
sORF
Alternative
Downstream
NMD

E14, Spleen_B_cell, BMDC,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

1300428

165

ATA...

IRS...

ATA

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1608116

CTG...

LNL...

CTG

sORF
Upstream

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1298267

153

ATC...

IQM...

ATC

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
25119	ENSMUST00000162952	Wars-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

9939

CTG...

LTT...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic
Downstream
NMD

3T3, BMDC, E14,
MEF, v6-5, B_cell,
Brain, R1E, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
25119	ENSMUST00000162952	Wars-207	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	weak	4	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

666788

153

GTG...

VTP...

GTG

InCDS
Overlapping
sORF
Alternative

BMDC, 3T3, Brain,
E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		3	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1296957

156

GTG...

VKI...

GTG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
25119	ENSMUST00000162952	Wars-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1131589

150

GTG...

VSP...

GTG

Alternative
Downstream
NMD
sORF

R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

329356

TTG...

LSI...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, E14,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		3	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

329432

TTG...

LKM...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, E14,
B_cell, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		3	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

939275

ATC...

ILN...

ATC

Alternative
Downstream
NMD
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

780600

165

ATG...

MTP...

ATG

NMD
Overlapping
sORF
Upstream

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

329582

132

GTG...

VTL...

GTG

InCDS
Overlapping
sORF
Alternative

B_cell, v6-5, 3T3,
Brain, MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		4	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		3	sORFs_org_Mouse

780265

165

CTG...

LGT...

CTG

Intronic
sORF
InCDS
Overlapping

B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
778714	ENSMUST00000160974	Wars-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1300100

102

ATT...

ILW...

ATT

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse

667902

GTG...

VQK...

GTG

InCDS
Overlapping
sORF

3T3, Brain, B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

325082

GTG...

VDV...

GTG

Downstream
NMD
sORF

B_cell, Brain, MEF,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

25933

165

GTG...

VPL...

GTG

Intronic
sORF
Alternative
Downstream
NMD

Brain, Testis, B_cell,
MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
25119	ENSMUST00000162952	Wars-207	retained_intron	Ribo-seq		3	sORFs_org_Mouse
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

1298016

108

ATT...

ILW...

ATT

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse

329366

144

GTG...

VTA...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, R1E,
v6-5, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

939348

ATA...

ISS...

ATA

Alternative
Downstream
NMD
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

666678

126

CTG...

LTR...

CTG

Alternative
InCDS
Overlapping
sORF

v6-5, 3T3, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse

329039

126

CTG...

LMP...

CTG

InCDS
Overlapping
sORF
Alternative

B_cell, v6-5, MEF,
NSC, Spleen_B_cell, 3T3,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		4	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		5	sORFs_org_Mouse

460582

147

GTG...

VGP...

GTG

Alternative
Overlapping
sORF
Upstream

3T3, B_cell, MEF,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

1298992

120

AAG...

KDL...

AAG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
25119	ENSMUST00000162952	Wars-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

780561

180

CTG...

LQQ...

CTG

NMD
Overlapping
sORF
Upstream

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1299694

AGG...

RGA...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1040380

TTG...

LGV...

TTG

sORF
Upstream

Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

660800

CTG...

LWR...

CTG

Alternative
Downstream
NMD
sORF
InCDS
Overlapping

MEF, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

660420

GTG...

VAS...

GTG

InCDS
NMD
Overlapping
sORF
Alternative

B_cell, MEF, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1605969

TTG...

LPV...

TTG

Alternative
InCDS
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

940248

132

ATA...

IAT...

ATA

InCDS
NMD
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
938718	ENSMUST00000162748	Wars-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

327900

GTG...

VAT...

GTG

Alternative
Downstream
NMD
sORF
InCDS
Overlapping

Brain, R1E, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

1040660

CTG...

LTG...

CTG

sORF
Upstream

Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9637	ENSMUST00000109848	Wars-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

327214

GTG...

VKE...

GTG

Alternative
Downstream
NMD
sORF

Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

779292

TTG...

LQF...

TTG

Alternative
Downstream
NMD
sORF
Intronic

R1E, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
778714	ENSMUST00000160974	Wars-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

938839

CTG...

LNL...

CTG

Alternative
NMD
sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

459849

177

CTG...

LAA...

CTG

Intronic
sORF
InCDS
Overlapping

B_cell, MEF, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
778714	ENSMUST00000160974	Wars-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
458037	ENSMUST00000161154	Wars-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1706019

GTG...

VKW...

GTG

Alternative
Downstream
NMD
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

1297926

ATA...

ILW...

ATA

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

780351

105

TTG...

LSL...

TTG

Alternative
Downstream
NMD
sORF

B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

667409

TTG...

LFS...

TTG

InCDS
Overlapping
sORF

3T3, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
326654	ENSMUST00000161410	Wars-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse

324676

CTG...

LYT...

CTG

Alternative
Downstream
NMD
sORF

B_cell, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
320710	ENSMUST00000160477	Wars-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

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