Gene NCBI:22352 | MetamORF

Gene

ID CARD

NCBI:22352

Aliases

ENSMUSG00000026728
MGI:98932, NCBI:22352, OFF:Vim
Vim

Chromosome

Transcripts

106 ORFs
6 known transcripts
187 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

15241

ENSMUST00000028062

Vim-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
47460	93	ATG ...	MPC ...	Ribo-seq	ATG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Testis
412896	132	AGG ...	RRC ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	C2C12
45254	48	GTG ...	VAP ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Liver, Testis
46554	81	CTG ...	LCP ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, Testis
103422	36	CTG ...	LSS ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, C2C12, R1E
1462457	123	GTG ...	VNT ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF, R1E
15297	84	GTG ...	VRW ...	Ribo-seq	GTG	weak	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Skin_tumor, v6-5
498527	129	CTG ...	LTS ...	Ribo-seq	CTG		4	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Brain, MEF, v6-5
1053340	60	TTG ...	LKL ...	Ribo-seq	TTG	weak	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E
49125	126	CTG ...	LTS ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Testis
46932	243	ATG ...	MTA ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, Brain, C2C12, R1E, Testis
15240	78	ATG ...	MLT ...	Ribo-seq	ATG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, Brain, R1E, Skin_tumor
412758	48	ACG ...	TPS ...	Ribo-seq	ACG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	C2C12
16181	231	CTG ...	LTS ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Skin_tumor, Testis
1878340	102	ATG ...	MLR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
47295	129	TTG ...	LLT ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Testis
44315	111	CTG ...	LPT ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Testis
1054543	66	TTG ...	LPL ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E
412214	147	ATT ...	IPL ...	Ribo-seq	ATT	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	C2C12
16548	291	ATG ...	MKA ...	Ribo-seq	ATG		7	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Skin_tumor, Testis, v6-5
412857	114	AGG ...	RKP ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	C2C12
1460561	33	TTG ...	LAA ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF, R1E
46279	234	TTG ...	LPT ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, Brain, R1E, Testis
110463	30	TTG ...	LTP ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF
48208	225	TTG ...	LSS ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Testis
95356	51	TTG ...	LTL ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, Brain, C2C12, R1E
412472	45	TTG ...	LNG ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, C2C12, R1E
1052567	54	CTG ...	LLT ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF, R1E
15484	159	ATG ...	MSR ...	Ribo-seq	ATG		6	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Skin_tumor, v6-5
16265	222	CTG ...	LRL ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Skin_tumor, Testis
498026	147	ATG ...	MWT ...	Ribo-seq	ATG		4	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Brain, MEF, v6-5
16588	279	CTG ...	LPR ...	Ribo-seq	CTG		7	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Skin_tumor, Testis, v6-5
48077	138	TTG ...	LQF ...	Ribo-seq	TTG	weak	4	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	B_cell, BMDC, C2C12, Testis
15306	75	TTG ...	LTM ...	Ribo-seq	TTG	moderate	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, Brain, R1E, Skin_tumor
412229	75	AAG ...	KRI ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	C2C12
48339	117	CTG ...	LRL ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Testis
1460802	117	CTG ...	LPC ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Brain, MEF
15548	177	CTG ...	LSS ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, Brain, R1E, Skin_tumor, Testis
497959	66	GTG ...	VSR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC
47025	213	CTG ...	LPL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC, Testis
16209	216	CTG ...	LPT ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Skin_tumor, Testis
1460903	105	ATG ...	MCA ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, MEF
16425	234	TTG ...	LLT ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Skin_tumor, Testis
50636	198	ATG ...	MPC ...	Ribo-seq	ATG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Testis
47219	141	TTG ...	LLQ ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	B_cell, BMDC, Testis
49725	135	GTG ...	VKW ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Testis
47758	231	TTG ...	LAL ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Testis
1460209	120	CTG ...	LLP ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Brain, MEF
49391	204	TTG ...	LLR ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC, C2C12, Testis
15804	69	ATG ...	MLL ...	Ribo-seq	ATG	moderate	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, Brain, R1E, Skin_tumor
1728215	219	CTG ...	LPP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
15900	90	ATG ...	MKA ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Skin_tumor
1461039	108	GTG ...	VMC ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, MEF

492454

ENSMUST00000193675

Vim-206

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
970477	177	AGG ...	RSQ ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
45254	48	GTG ...	VAP ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1216380	186	AGG ...	RPS ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
47219	141	TTG ...	LLQ ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF, Neutrophil, NSC
16588	279	CTG ...	LPR ...	Ribo-seq	CTG		9	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, MEF, Neutrophil, NSC, Spleen_B_cell
412214	147	ATT ...	IPL ...	Ribo-seq	ATT	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC
15306	75	TTG ...	LTM ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil, v6-5
498026	147	ATG ...	MWT ...	Ribo-seq	ATG		6	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, Neutrophil, NSC, Spleen_B_cell
970716	255	AGG ...	RNG ...	Ribo-seq	AGG		1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
976846	39	ATC ...	INE ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	MEF
968843	120	AGG ...	RRC ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
976907	81	AGG ...	RML ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
103422	36	CTG ...	LSS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
47758	231	TTG ...	LAL ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF
47460	93	ATG ...	MPC ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC, Spleen_B_cell, v6-5
95356	51	TTG ...	LTL ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil
49391	204	TTG ...	LLR ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF, Neutrophil
48208	225	TTG ...	LSS ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF
1878340	102	ATG ...	MLR ...	Ribo-seq	ATG		1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
15240	78	ATG ...	MLT ...	Ribo-seq	ATG	moderate	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil, NSC, v6-5
412896	132	AGG ...	RRC ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
16209	216	CTG ...	LPT ...	Ribo-seq	CTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
412472	45	TTG ...	LNG ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil
966535	126	ACG ...	TRR ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
15484	159	ATG ...	MSR ...	Ribo-seq	ATG		8	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, BMDC, E14, MEF, Neutrophil, NSC, Spleen_B_cell
15297	84	GTG ...	VRW ...	Ribo-seq	GTG	weak	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, Neutrophil
1054543	66	TTG ...	LPL ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, Neutrophil, v6-5
16181	231	CTG ...	LTS ...	Ribo-seq	CTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
964709	90	ATC ...	ISS ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
1052567	54	CTG ...	LLT ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil, v6-5
44315	111	CTG ...	LPT ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC, Spleen_B_cell, v6-5
15804	69	ATG ...	MLL ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil, v6-5
46279	234	TTG ...	LPT ...	Ribo-seq	TTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14, MEF, Neutrophil, NSC, v6-5
46554	81	CTG ...	LCP ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, Neutrophil
498527	129	CTG ...	LTS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, Spleen_B_cell
1053340	60	TTG ...	LKL ...	Ribo-seq	TTG	weak	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil, v6-5
976836	75	AAG ...	KTR ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1207308	168	AGG ...	RNS ...	Ribo-seq	AGG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
46932	243	ATG ...	MTA ...	Ribo-seq	ATG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14, MEF, Neutrophil, NSC
16425	234	TTG ...	LLT ...	Ribo-seq	TTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
970873	153	AGG ...	RCS ...	Ribo-seq	AGG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
15548	177	CTG ...	LSS ...	Ribo-seq	CTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14, MEF, Neutrophil, NSC, v6-5
47025	213	CTG ...	LPL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF, Neutrophil
965759	78	ACG ...	TTR ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
49125	126	CTG ...	LTS ...	Ribo-seq	CTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
968597	189	AGG ...	RSC ...	Ribo-seq	AGG		2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, E14
48339	117	CTG ...	LRL ...	Ribo-seq	CTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
1212030	141	ACG ...	TFP ...	Ribo-seq	ACG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
16265	222	CTG ...	LRL ...	Ribo-seq	CTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
970967	168	ACG ...	TST ...	Ribo-seq	ACG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
50636	198	ATG ...	MPC ...	Ribo-seq	ATG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
970621	261	AGG ...	RPR ...	Ribo-seq	AGG		2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, E14
1462457	123	GTG ...	VNT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
16548	291	ATG ...	MKA ...	Ribo-seq	ATG		8	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, MEF, Neutrophil, NSC, Spleen_B_cell
968503	33	AAG ...	KHP ...	Ribo-seq	AAG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14, MEF
497959	66	GTG ...	VSR ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil, NSC, v6-5
969993	180	AGG ...	RPR ...	Ribo-seq	AGG		3	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, E14, MEF
48077	138	TTG ...	LQF ...	Ribo-seq	TTG	weak	4	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC, MEF, Neutrophil, NSC
412857	114	AGG ...	RKP ...	Ribo-seq	AGG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF
47295	129	TTG ...	LLT ...	Ribo-seq	TTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
971498	135	AGG ...	RRR ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
49725	135	GTG ...	VKW ...	Ribo-seq	GTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, Neutrophil, NSC, v6-5

110464

ENSMUST00000148248

Vim-203

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
969037	108	ACG ...	TSP ...	Ribo-seq	ACG	weak	2	sORFs_org_Mouse	Intronic sORF	BMDC, E14
966694	72	AGG ...	RSQ ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Intronic sORF	BMDC
968678	48	AGG ...	RCS ...	Ribo-seq	AGG		2	sORFs_org_Mouse	Intronic sORF	BMDC, E14
734972	39	TTG ...	LRP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	3T3
966889	120	GTG ...	VNT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	BMDC, E14
733178	30	GTG ...	VKW ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	3T3
110463	30	TTG ...	LTP ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
736929	78	CTG ...	LVD ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Liver
1211202	81	AGG ...	RPS ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Intronic sORF	E14
967741	111	AAG ...	KIC ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Intronic sORF	BMDC
1209374	39	ACG ...	TVE ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Intronic sORF	E14
47460	93	ATG ...	MPC ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	3T3, BMDC
968933	63	ACG ...	TST ...	Ribo-seq	ACG		2	sORFs_org_Mouse	Intronic sORF	BMDC, E14
731295	48	CTG ...	LIK ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	3T3, BMDC, E14, Liver
49125	126	CTG ...	LTS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, E14
47295	129	TTG ...	LLT ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	3T3, BMDC
1207938	141	AAG ...	KRW ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Intronic sORF	E14
44315	111	CTG ...	LPT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	3T3
48339	117	CTG ...	LRL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, BMDC
728367	93	CTG ...	LES ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	3T3, E14, Liver

741182

ENSMUST00000141365

Vim-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
976722	180	ATC ...	ILL ...	Ribo-seq	ATC		1	sORFs_org_Mouse	sORF	MEF
976686	258	AAG ...	KVE ...	Ribo-seq	AAG		1	sORFs_org_Mouse	sORF	MEF
412758	48	ACG ...	TPS ...	Ribo-seq	ACG	weak	1	sORFs_org_Mouse	sORF	MEF
976836	75	AAG ...	KTR ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	sORF	MEF
46554	81	CTG ...	LCP ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	sORF	3T3, MEF
976786	216	ATC ...	IDK ...	Ribo-seq	ATC		1	sORFs_org_Mouse	sORF	MEF
103422	36	CTG ...	LSS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	sORF	MEF
99545	207	GTG ...	VRF ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	MEF

96606

ENSMUST00000191615

Vim-205

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
116863	177	CTG ...	LLA ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
98734	132	CTG ...	LGD ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
99545	207	GTG ...	VRF ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
103046	87	GTG ...	VDQ ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
105395	51	GTG ...	VER ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
46932	243	ATG ...	MTA ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
103422	36	CTG ...	LSS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
106590	174	CTG ...	LAE ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
117412	99	CTG ...	LRR ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
96605	240	CTG ...	LND ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
736626	84	GTG ...	VLL ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
734138	81	CTG ...	LLL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
497218	78	CTG ...	LLQ ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
108064	123	CTG ...	LYE ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
109415	36	CTG ...	LAE ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
46279	234	TTG ...	LPT ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
497959	66	GTG ...	VSR ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
15548	177	CTG ...	LSS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
98821	249	CTG ...	LQE ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain

492274

ENSMUST00000155605

Vim-204

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
109415	36	CTG ...	LAE ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell
46932	243	ATG ...	MTA ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell, v6-5
1549273	132	GTG ...	VWP ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, MEF
106590	174	CTG ...	LAE ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell
98734	132	CTG ...	LGD ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell
15240	78	ATG ...	MLT ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, MEF
117412	99	CTG ...	LRR ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell
103046	87	GTG ...	VDQ ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell
96605	240	CTG ...	LND ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell, v6-5
15804	69	ATG ...	MLL ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
734138	81	CTG ...	LLL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, MEF
105395	51	GTG ...	VER ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell
1549107	93	TTG ...	LIN ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	Brain, MEF
497218	78	CTG ...	LLQ ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell
116863	177	CTG ...	LLA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell
98821	249	CTG ...	LQE ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell, v6-5
46554	81	CTG ...	LCP ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
736626	84	GTG ...	VLL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, MEF
15306	75	TTG ...	LTM ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, MEF
108064	123	CTG ...	LYE ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell
497959	66	GTG ...	VSR ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell
1549682	141	TTG ...	LQE ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Brain
46279	234	TTG ...	LPT ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell
15548	177	CTG ...	LSS ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell
99545	207	GTG ...	VRF ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell

3243559

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1878340	102	ATG ...	MLR ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

106 ORFs
6 known transcripts
187 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

47460

ATG...

MPC...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic

BMDC, Brain, MEF,
R1E, Testis, E14,
NSC, Spleen_B_cell, v6-5,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		6	sORFs_org_Mouse
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

970477

177

AGG...

RSQ...

AGG

Alternative
InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

45254

GTG...

VAP...

GTG

Alternative
InCDS
Overlapping
sORF

E14, BMDC, Liver,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

969037

108

ACG...

TSP...

ACG

Intronic
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

1216380

186

AGG...

RPS...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

47219

141

TTG...

LLQ...

TTG

Alternative
Overlapping
sORF
Upstream

MEF, Neutrophil, NSC,
B_cell, BMDC, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse

16588

279

CTG...

LPR...

CTG

InCDS
Overlapping
sORF

3T3, E14, MEF,
Neutrophil, NSC, Spleen_B_cell,
BMDC, Brain, R1E,
Skin_tumor, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		9	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		7	sORFs_org_Mouse

412896

132

AGG...

RRC...

AGG

Alternative
InCDS
Overlapping
sORF

C2C12, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

46554

CTG...

LCP...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

BMDC, Brain, Testis,
3T3, MEF, E14,
Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
741182	ENSMUST00000141365	Vim-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

966694

AGG...

RSQ...

AGG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

412214

147

ATT...

IPL...

ATT

Alternative
Overlapping
sORF
Upstream

BMDC, C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

103422

CTG...

LSS...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

B_cell, C2C12, R1E,
E14, Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
741182	ENSMUST00000141365	Vim-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

976722

180

ATC...

ILL...

ATC

sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
741182	ENSMUST00000141365	Vim-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1462457

123

GTG...

VNT...

GTG

Alternative
InCDS
Overlapping
sORF

BMDC, MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

15306

TTG...

LTM...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic

MEF, Neutrophil, v6-5,
B_cell, BMDC, Brain,
R1E, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

15297

GTG...

VRW...

GTG

Alternative
InCDS
Overlapping
sORF

BMDC, Brain, MEF,
R1E, Skin_tumor, v6-5,
E14, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	weak	6	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse

498026

147

ATG...

MWT...

ATG

InCDS
Overlapping
sORF

E14, MEF, Neutrophil,
NSC, Spleen_B_cell, BMDC,
Brain, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		6	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

968678

AGG...

RCS...

AGG

Intronic
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

116863

177

CTG...

LLA...

CTG

Intronic
sORF

3T3, Brain, MEF,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse

98734

132

CTG...

LGD...

CTG

Intronic
sORF

3T3, Brain, MEF,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse

970716

255

AGG...

RNG...

AGG

InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

976846

ATC...

INE...

ATC

Alternative
Downstream
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

498527

129

CTG...

LTS...

CTG

InCDS
Overlapping
sORF

BMDC, Brain, MEF,
v6-5, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse

968843

120

AGG...

RRC...

AGG

Alternative
InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

976686

258

AAG...

KVE...

AAG

sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
741182	ENSMUST00000141365	Vim-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1053340

TTG...

LKL...

TTG

Alternative
InCDS
Overlapping
sORF

BMDC, Brain, MEF,
R1E, Neutrophil, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse

109415

CTG...

LAE...

CTG

Intronic
sORF

Brain, MEF, Spleen_B_cell,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse

976907

AGG...

RML...

AGG

Alternative
InCDS
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

46932

243

ATG...

MTA...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping

Brain, MEF, Spleen_B_cell,
v6-5, B_cell, BMDC,
C2C12, R1E, Testis,
3T3, E14, Neutrophil,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		4	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		8	sORFs_org_Mouse

1878340

102

ATG...

MLR...

ATG

sORF
Alternative
InCDS
Overlapping

R1E, Glioma,
Liver, MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
3243559	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		1	Johnstone2016

49125

126

CTG...

LTS...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

BMDC, Brain, MEF,
R1E, Testis, 3T3,
E14, Neutrophil, NSC,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		8	sORFs_org_Mouse

734972

TTG...

LRP...

TTG

Intronic
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

966889

120

GTG...

VNT...

GTG

Intronic
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1549273

132

GTG...

VWP...

GTG

Intronic
sORF

Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

733178

GTG...

VKW...

GTG

Intronic
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

15240

ATG...

MLT...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic

B_cell, BMDC, Brain,
R1E, Skin_tumor, MEF,
Neutrophil, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse

99545

207

GTG...

VRF...

GTG

Intronic
sORF

3T3, Brain, MEF,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
741182	ENSMUST00000141365	Vim-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse

412758

ACG...

TPS...

ACG

Alternative
InCDS
Overlapping
sORF

C2C12, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
741182	ENSMUST00000141365	Vim-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

106590

174

CTG...

LAE...

CTG

Intronic
sORF

Brain, MEF, Spleen_B_cell,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

103046

GTG...

VDQ...

GTG

Intronic
sORF

3T3, Brain, MEF,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse

47758

231

TTG...

LAL...

TTG

Alternative
Overlapping
sORF
Upstream

MEF, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

117412

CTG...

LRR...

CTG

Intronic
sORF

Brain, MEF, Spleen_B_cell,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

95356

TTG...

LTL...

TTG

Alternative
InCDS
Overlapping
sORF

MEF, Neutrophil, B_cell,
BMDC, Brain, C2C12,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse

49391

204

TTG...

LLR...

TTG

Alternative
Overlapping
sORF
Upstream

MEF, Neutrophil, BMDC,
C2C12, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse

105395

GTG...

VER...

GTG

Intronic
sORF

3T3, Brain, MEF,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse

16181

231

CTG...

LTS...

CTG

Alternative
InCDS
Overlapping
sORF

BMDC, Brain, MEF,
R1E, Skin_tumor, Testis,
3T3, E14, Neutrophil,
NSC, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		9	sORFs_org_Mouse

110463

TTG...

LTP...

TTG

Intronic
sORF
Alternative
InCDS
Overlapping

Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

48208

225

TTG...

LSS...

TTG

Alternative
Overlapping
sORF
Upstream

MEF, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

736929

CTG...

LVD...

CTG

Intronic
sORF

3T3, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

976836

AAG...

KTR...

AAG

sORF
Alternative
InCDS
Overlapping

MEF, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
741182	ENSMUST00000141365	Vim-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1211202

AGG...

RPS...

AGG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

47295

129

TTG...

LLT...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic

BMDC, Brain, MEF,
R1E, Testis, 3T3,
E14, Neutrophil, NSC,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		7	sORFs_org_Mouse

16209

216

CTG...

LPT...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, E14, MEF,
Neutrophil, NSC, Spleen_B_cell,
v6-5, BMDC, Brain,
R1E, Skin_tumor, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		8	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

412472

TTG...

LNG...

TTG

Alternative
InCDS
Overlapping
sORF

MEF, Neutrophil, B_cell,
BMDC, C2C12, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse

44315

111

CTG...

LPT...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

BMDC, Brain, MEF,
R1E, Testis, E14,
NSC, Spleen_B_cell, v6-5,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		6	sORFs_org_Mouse
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

966535

126

ACG...

TRR...

ACG

Alternative
InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

967741

111

AAG...

KIC...

AAG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

15484

159

ATG...

MSR...

ATG

InCDS
Overlapping
sORF

3T3, BMDC, E14,
MEF, Neutrophil, NSC,
Spleen_B_cell, Brain, R1E,
Skin_tumor, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		8	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

1054543

TTG...

LPL...

TTG

Alternative
InCDS
Overlapping
sORF

BMDC, Brain, MEF,
R1E, E14, Neutrophil,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse

1209374

ACG...

TVE...

ACG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

16548

291

ATG...

MKA...

ATG

InCDS
Overlapping
sORF

BMDC, Brain, MEF,
R1E, Skin_tumor, Testis,
v6-5, 3T3, E14,
Neutrophil, NSC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		7	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		8	sORFs_org_Mouse

412857

114

AGG...

RKP...

AGG

Alternative
InCDS
Overlapping
sORF

C2C12, E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse

964709

ATC...

ISS...

ATC

Alternative
InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1460561

TTG...

LAA...

TTG

Alternative
InCDS
Overlapping
sORF

BMDC, MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

46279

234

TTG...

LPT...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic

B_cell, BMDC, Brain,
R1E, Testis, E14,
MEF, Neutrophil, NSC,
v6-5, 3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		8	sORFs_org_Mouse
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse

1052567

CTG...

LLT...

CTG

Alternative
InCDS
Overlapping
sORF

MEF, Neutrophil, v6-5,
BMDC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

96605

240

CTG...

LND...

CTG

Intronic
sORF

Brain, MEF, Spleen_B_cell,
v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		4	sORFs_org_Mouse
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

736626

GTG...

VLL...

GTG

Intronic
sORF

3T3, Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

15804

ATG...

MLL...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic

MEF, Neutrophil, v6-5,
B_cell, BMDC, Brain,
R1E, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse

734138

CTG...

LLL...

CTG

Intronic
sORF

Brain, MEF, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

968933

ACG...

TST...

ACG

Intronic
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

976786

216

ATC...

IDK...

ATC

sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
741182	ENSMUST00000141365	Vim-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

731295

CTG...

LIK...

CTG

Intronic
sORF

3T3, BMDC, E14,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		4	sORFs_org_Mouse

1549107

TTG...

LIN...

TTG

Intronic
sORF

Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

16265

222

CTG...

LRL...

CTG

Alternative
InCDS
Overlapping
sORF

BMDC, Brain, MEF,
R1E, Skin_tumor, Testis,
3T3, E14, Neutrophil,
NSC, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		8	sORFs_org_Mouse

48077

138

TTG...

LQF...

TTG

Alternative
Overlapping
sORF
Upstream

B_cell, BMDC, C2C12,
Testis, MEF, Neutrophil,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse

1207308

168

AGG...

RNS...

AGG

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

16425

234

TTG...

LLT...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, E14,
MEF, Neutrophil, NSC,
Spleen_B_cell, v6-5, Brain,
R1E, Skin_tumor, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		9	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

412229

AAG...

KRI...

AAG

Alternative
InCDS
Overlapping
sORF

C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

497218

CTG...

LLQ...

CTG

Intronic
sORF

Brain, MEF, Spleen_B_cell,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

48339

117

CTG...

LRL...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

BMDC, Brain, MEF,
R1E, Testis, E14,
Neutrophil, NSC, Spleen_B_cell,
v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		7	sORFs_org_Mouse
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

970873

153

AGG...

RCS...

AGG

Alternative
InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1460802

117

CTG...

LPC...

CTG

InCDS
Overlapping
sORF

BMDC, Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

15548

177

CTG...

LSS...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

B_cell, BMDC, Brain,
R1E, Skin_tumor, Testis,
E14, MEF, Neutrophil,
NSC, v6-5, 3T3,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		8	sORFs_org_Mouse
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse

497959

GTG...

VSR...

GTG

Alternative
InCDS
Overlapping
sORF
Intronic

B_cell, BMDC, 3T3,
Brain, MEF, Spleen_B_cell,
Neutrophil, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		6	sORFs_org_Mouse

47025

213

CTG...

LPL...

CTG

Alternative
Overlapping
sORF
Upstream

MEF, Neutrophil, BMDC,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

965759

ACG...

TTR...

ACG

Alternative
InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

108064

123

CTG...

LYE...

CTG

Intronic
sORF

3T3, Brain, MEF,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse

98821

249

CTG...

LQE...

CTG

Intronic
sORF

Brain, MEF, Spleen_B_cell,
v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		4	sORFs_org_Mouse
96606	ENSMUST00000191615	Vim-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

1207938

141

AAG...

KRW...

AAG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

968597

189

AGG...

RSC...

AGG

InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1212030

141

ACG...

TFP...

ACG

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1460903

105

ATG...

MCA...

ATG

InCDS
Overlapping
sORF

BMDC, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

50636

198

ATG...

MPC...

ATG

Alternative
InCDS
Overlapping
sORF

BMDC, Brain, MEF,
R1E, Testis, 3T3,
E14, Neutrophil, NSC,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		9	sORFs_org_Mouse

970967

168

ACG...

TST...

ACG

Alternative
InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse

728367

CTG...

LES...

CTG

Intronic
sORF

3T3, E14, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
110464	ENSMUST00000148248	Vim-203	retained_intron	Ribo-seq		3	sORFs_org_Mouse

970621

261

AGG...

RPR...

AGG

InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse

49725

135

GTG...

VKW...

GTG

Alternative
InCDS
Overlapping
sORF

BMDC, Brain, MEF,
R1E, Testis, 3T3,
E14, Neutrophil, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		7	sORFs_org_Mouse

1549682

141

TTG...

LQE...

TTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492274	ENSMUST00000155605	Vim-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1460209

120

CTG...

LLP...

CTG

InCDS
Overlapping
sORF

BMDC, Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

968503

AAG...

KHP...

AAG

Alternative
InCDS
Overlapping
sORF

BMDC, E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		3	sORFs_org_Mouse

969993

180

AGG...

RPR...

AGG

InCDS
Overlapping
sORF

BMDC, E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1728215

219

CTG...

LPP...

CTG

Alternative
InCDS
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

15900

ATG...

MKA...

ATG

InCDS
Overlapping
sORF

Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1461039

108

GTG...

VMC...

GTG

InCDS
Overlapping
sORF

BMDC, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15241	ENSMUST00000028062	Vim-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

971498

135

AGG...

RRR...

AGG

Alternative
InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
492454	ENSMUST00000193675	Vim-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

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