Gene NCBI:22123 | MetamORF

Gene

ID CARD

NCBI:22123

Aliases

AI255837
AntP91a, D11Bwg1349e, ENSMUSG00000017221
MGI:98858, NCBI:22123, OFF:Psmd3
Psd3, Psmd3, Tstap91a

Chromosome

Transcripts

90 ORFs
5 known transcripts
170 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

303355

ENSMUST00000017365

Psmd3-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
91861	60	CTG ...	LCL ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	sORF Upstream	MEF, Neutrophil
18329	42	GTG ...	VRV ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	sORF Upstream	MEF, Neutrophil
309998	69	TTG ...	LPS ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, NSC, Spleen_B_cell
303354	87	CTG ...	LLG ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF, NSC, Spleen_B_cell
1289606	81	ATT ...	IPP ...	Ribo-seq	ATT		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
318541	102	ATG ...	MSS ...	Ribo-seq	ATG		7	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, Glioma, Liver, MEF, MESC
1284689	36	ATC ...	ITR ...	Ribo-seq	ATC	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
650545	60	CTG ...	LCM ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, v6-5
318916	81	ATG ...	MWC ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Liver, MEF
447931	39	TTG ...	LGR ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	NSC, Spleen_B_cell
1295600	183	AGG ...	RKS ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
303504	90	TTG ...	LTS ...	Ribo-seq	TTG		6	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, v6-5
293588	30	GTG ...	VGQ ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	NSC
18729	33	CTG ...	LFP ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
90946	30	GTG ...	VLL ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF
447687	84	CTG ...	LGA ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Spleen_B_cell
652335	75	ATG ...	MFC ...	Ribo-seq	ATG	moderate	6	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	BMDC, E14, Glioma, Liver, MEF, MESC, v6-5
91318	54	CTG ...	LVS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	sORF Upstream	MEF, Neutrophil
454567	66	ATG ...	MPF ...	Ribo-seq	ATG		4	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC, NSC, Spleen_B_cell
651436	45	CTG ...	LRP ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC
1130989	60	GTG ...	VGQ ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC
647793	54	ATG ...	MAS ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14, MEF, v6-5
313746	135	CTG ...	LPS ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, Liver, MEF, R1E
311533	54	ATG ...	MPF ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	NSC, Spleen_B_cell
20337	102	GTG ...	VRP ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	sORF Upstream	MEF, Neutrophil, Spleen_B_cell
447991	36	GTG ...	VQA ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	Spleen_B_cell
452406	51	TTG ...	LRP ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell

8091

ENSMUST00000152102

Psmd3-205

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
20106	105	CTG ...	LYK ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
22003	165	CTG ...	LMQ ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
18905	120	CTG ...	LEY ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
20337	102	GTG ...	VRP ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	MEF, R1E
21269	141	CTG ...	LQF ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
91003	93	GTG ...	VHG ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
309998	69	TTG ...	LPS ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, R1E
774157	93	TTG ...	LLC ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Brain
17552	126	CTG ...	LGE ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	R1E, Testis
17466	201	TTG ...	LHA ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
18181	69	CTG ...	LLM ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Neutrophil, R1E
646415	45	CTG ...	LRW ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
91861	60	CTG ...	LCL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	R1E
650545	60	CTG ...	LCM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
649278	168	CTG ...	LVL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
447931	39	TTG ...	LGR ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	R1E
20448	69	GTG ...	VFP ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
8951	54	CTG ...	LII ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Skin_tumor, Testis
18640	162	GTG ...	VLR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
90946	30	GTG ...	VLL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	R1E
311533	54	ATG ...	MPF ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	R1E
303504	90	TTG ...	LTS ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
452406	51	TTG ...	LRP ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
18457	150	CTG ...	LRM ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
90775	168	CTG ...	LSY ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Testis
1529455	213	ATG ...	MEL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	Brain
773808	192	TTG ...	LQV ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
22033	96	CTG ...	LPE ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	3T3, Brain, R1E
18329	42	GTG ...	VRV ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	R1E
18836	159	GTG ...	VHK ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	R1E, Testis
652335	75	ATG ...	MFC ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
19690	87	GTG ...	VEA ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	3T3, Brain, R1E
1530842	207	CTG ...	LFP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
302432	60	ATG ...	MPG ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
1838488	129	CTG ...	LLG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
773260	87	TTG ...	LSF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	R1E
91641	183	GTG ...	VRM ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Testis
91038	141	CTG ...	LPS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
647793	54	ATG ...	MAS ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
91607	117	CTG ...	LHY ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
18729	33	CTG ...	LFP ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
20580	147	CTG ...	LIV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	R1E, Testis
91144	132	CTG ...	LLR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
91750	159	CTG ...	LRA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
21809	84	CTG ...	LVS ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	Brain
91318	54	CTG ...	LVS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	R1E
303354	87	CTG ...	LLG ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, R1E
20270	51	CTG ...	LMN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
90697	105	CTG ...	LQF ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Testis
18880	105	TTG ...	LYD ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
17592	174	CTG ...	LRH ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
647641	141	CTG ...	LLF ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	3T3, Brain, R1E
18567	75	CTG ...	LQL ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	3T3, Brain, Neutrophil, R1E
299581	63	CTG ...	LCP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	R1E
447687	84	CTG ...	LGA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	R1E
18126	129	CTG ...	LDL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
20746	171	GTG ...	VIE ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	Intronic sORF	3T3, Brain, R1E, Testis
643725	138	TTG ...	LFA ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Intronic sORF	3T3, Brain, R1E
651436	45	CTG ...	LRP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	R1E
22043	141	TTG ...	LNL ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
8090	99	CTG ...	LDQ ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	3T3, R1E, Skin_tumor, Testis
19702	207	GTG ...	VRQ ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
20499	141	GTG ...	VVE ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	Brain, R1E, Testis
643809	129	CTG ...	LSS ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	3T3, Brain, R1E

17467

ENSMUST00000149489

Psmd3-204

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
21809	84	CTG ...	LVS ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Intronic sORF	B_cell, Testis
20106	105	CTG ...	LYK ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Testis
302432	60	ATG ...	MPG ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	E14, Liver
19690	87	GTG ...	VEA ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Testis
651436	45	CTG ...	LRP ...	Ribo-seq	CTG	weak	6	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, BMDC, E14, Liver, MEF
1288230	39	AAG ...	KNR ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
91750	159	CTG ...	LRA ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Brain, Testis
650545	60	CTG ...	LCM ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Liver
1289750	75	AAG ...	KSV ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
774157	93	TTG ...	LLC ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
643809	129	CTG ...	LSS ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Liver
647793	54	ATG ...	MAS ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, BMDC, Liver
646415	45	CTG ...	LRW ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Intronic sORF	B_cell, Liver
21269	141	CTG ...	LQF ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, E14, Liver, MEF, Testis
1287136	42	AGG ...	RLH ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
1285040	30	ACG ...	TML ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
91038	141	CTG ...	LPS ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Brain, Testis
19702	207	GTG ...	VRQ ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Brain, E14, Testis
1284554	195	ATT ...	ITC ...	Ribo-seq	ATT	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
91318	54	CTG ...	LVS ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, E14, Liver, Testis
17466	201	TTG ...	LHA ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Intronic sORF	Liver, Testis
299581	63	CTG ...	LCP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	MEF
1287616	249	AAG ...	KPP ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Intronic sORF	E14
652335	75	ATG ...	MFC ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Liver, MEF
20916	198	GTG ...	VEM ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Testis
447687	84	CTG ...	LGA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	B_cell
18729	33	CTG ...	LFP ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Liver, MEF, Testis
649278	168	CTG ...	LVL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
91144	132	CTG ...	LLR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Testis
773260	87	TTG ...	LSF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
18567	75	CTG ...	LQL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Testis
1291062	42	AGG ...	RLS ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
22003	165	CTG ...	LMQ ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Testis
18329	42	GTG ...	VRV ...	Ribo-seq	GTG	moderate	5	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, E14, Liver, Testis
1286541	141	AAG ...	KAA ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Intronic sORF	E14
22033	96	CTG ...	LPE ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Liver, Testis
18880	105	TTG ...	LYD ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Testis
18457	150	CTG ...	LRM ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Brain, Testis
1286229	123	ACG ...	TPG ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Intronic sORF	E14
311533	54	ATG ...	MPF ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	Intronic sORF	3T3, E14, Liver
22043	141	TTG ...	LNL ...	Ribo-seq	TTG	weak	4	sORFs_org_Mouse	Intronic sORF	B_cell, E14, Liver, Testis
90946	30	GTG ...	VLL ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	Intronic sORF	Liver, MEF, Testis
1291223	102	AAG ...	KPT ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
18640	162	GTG ...	VLR ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Brain, Testis
1289938	93	AGG ...	RQQ ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
18126	129	CTG ...	LDL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Testis
1289794	54	ACG ...	TRA ...	Ribo-seq	ACG	weak	1	sORFs_org_Mouse	Intronic sORF	E14
17592	174	CTG ...	LRH ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Intronic sORF	B_cell, E14, Liver, Testis
1289449	33	AGG ...	RYL ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
773808	192	TTG ...	LQV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
643725	138	TTG ...	LFA ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Liver
447991	36	GTG ...	VQA ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
20448	69	GTG ...	VFP ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	Testis
18905	120	CTG ...	LEY ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	E14, Testis
91607	117	CTG ...	LHY ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Testis
1288476	96	ACG ...	TMT ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
647641	141	CTG ...	LLF ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Liver
18181	69	CTG ...	LLM ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, E14, Testis
91003	93	GTG ...	VHG ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Testis
20337	102	GTG ...	VRP ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, E14, Testis
1285029	126	ATC ...	IQL ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
20270	51	CTG ...	LMN ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, E14, Testis
91861	60	CTG ...	LCL ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, E14, Liver, Testis

293589

ENSMUST00000142790

Psmd3-203

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
91607	117	CTG ...	LHY ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF, R1E
22043	141	TTG ...	LNL ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF, R1E
299581	63	CTG ...	LCP ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF
17466	201	TTG ...	LHA ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF
311533	54	ATG ...	MPF ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
302432	60	ATG ...	MPG ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF, R1E
21809	84	CTG ...	LVS ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF, R1E
91144	132	CTG ...	LLR ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF, R1E
293588	30	GTG ...	VGQ ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF
17592	174	CTG ...	LRH ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF
18880	105	TTG ...	LYD ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF, R1E
20448	69	GTG ...	VFP ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF, R1E
18905	120	CTG ...	LEY ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	Brain, MEF

771245

ENSMUST00000123676

Psmd3-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1130989	60	GTG ...	VGQ ...	Ribo-seq	GTG		3	sORFs_org_Mouse	sORF	E14, MEF, v6-5
293588	30	GTG ...	VGQ ...	Ribo-seq	GTG		3	sORFs_org_Mouse	sORF	B_cell, E14, v6-5
311533	54	ATG ...	MPF ...	Ribo-seq	ATG		4	sORFs_org_Mouse	sORF	B_cell, E14, MEF, v6-5

3049978

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
318541	102	ATG ...	MSS ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

90 ORFs
5 known transcripts
170 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

91861

CTG...

LCL...

CTG

sORF
Upstream
Intronic

MEF, Neutrophil, R1E,
3T3, B_cell, E14,
Liver, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse

20106

105

CTG...

LYK...

CTG

Intronic
sORF

Brain, R1E, B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse

22003

165

CTG...

LMQ...

CTG

Intronic
sORF

Brain, R1E, B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse

18905

120

CTG...

LEY...

CTG

Intronic
sORF

Brain, R1E, MEF,
E14, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
293589	ENSMUST00000142790	Psmd3-203	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

18329

GTG...

VRV...

GTG

sORF
Upstream
Intronic

MEF, Neutrophil, R1E,
3T3, B_cell, E14,
Liver, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse

21809

CTG...

LVS...

CTG

Intronic
sORF

B_cell, Testis, 3T3,
Brain, MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
293589	ENSMUST00000142790	Psmd3-203	retained_intron	Ribo-seq		5	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

91607

117

CTG...

LHY...

CTG

Intronic
sORF

3T3, Brain, MEF,
R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293589	ENSMUST00000142790	Psmd3-203	retained_intron	Ribo-seq		5	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

309998

TTG...

LPS...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic

Brain, NSC, Spleen_B_cell,
3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

1130989

GTG...

VGQ...

GTG

sORF
Alternative
InCDS
Overlapping

E14, MEF, v6-5,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
771245	ENSMUST00000123676	Psmd3-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

302432

ATG...

MPG...

ATG

Intronic
sORF

E14, Liver, 3T3,
Brain, MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
293589	ENSMUST00000142790	Psmd3-203	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

19690

GTG...

VEA...

GTG

Intronic
sORF

B_cell, Brain, Testis,
3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse

20337

102

GTG...

VRP...

GTG

Intronic
sORF
Upstream

MEF, R1E, Neutrophil,
Spleen_B_cell, 3T3, B_cell,
E14, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse

21269

141

CTG...

LQF...

CTG

Intronic
sORF

Brain, R1E, B_cell,
E14, Liver, MEF,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		6	sORFs_org_Mouse

22043

141

TTG...

LNL...

TTG

Intronic
sORF

3T3, Brain, MEF,
R1E, B_cell, E14,
Liver, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293589	ENSMUST00000142790	Psmd3-203	retained_intron	Ribo-seq		5	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

651436

CTG...

LRP...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping

3T3, B_cell, BMDC,
E14, Liver, MEF,
NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	weak	6	sORFs_org_Mouse
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

1288230

AAG...

KNR...

AAG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

91003

GTG...

VHG...

GTG

Intronic
sORF

Brain, R1E, B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse

91750

159

CTG...

LRA...

CTG

Intronic
sORF

3T3, B_cell, Brain,
Testis, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		4	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse

774157

TTG...

LLC...

TTG

Intronic
sORF

Brain, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

650545

CTG...

LCM...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping

3T3, B_cell, Liver,
E14, MEF, v6-5,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

303354

CTG...

LLG...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

Brain, MEF, NSC,
Spleen_B_cell, 3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

17552

126

CTG...

LGE...

CTG

Intronic
sORF

R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1289606

ATT...

IPP...

ATT

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1289750

AAG...

KSV...

AAG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

643809

129

CTG...

LSS...

CTG

Intronic
sORF

B_cell, Brain, Liver,
3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse

318541

102

ATG...

MSS...

ATG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, Glioma, Liver,
MEF, MESC,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq		7	sORFs_org_Mouse Johnstone2016
3049978	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

647793

ATG...

MAS...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping

3T3, B_cell, BMDC,
Liver, Brain, E14,
MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse

646415

CTG...

LRW...

CTG

Intronic
sORF

B_cell, Liver, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

17466

201

TTG...

LHA...

TTG

Intronic
sORF

Brain, R1E, 3T3,
MEF, Liver, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
293589	ENSMUST00000142790	Psmd3-203	retained_intron	Ribo-seq		4	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

1284689

ATC...

ITR...

ATC

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

18181

CTG...

LLM...

CTG

Intronic
sORF

Neutrophil, R1E, B_cell,
Brain, E14, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		4	sORFs_org_Mouse

299581

CTG...

LCP...

CTG

Intronic
sORF

3T3, Brain, MEF,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293589	ENSMUST00000142790	Psmd3-203	retained_intron	Ribo-seq		3	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

318916

ATG...

MWC...

ATG

Alternative
InCDS
Overlapping
sORF

Brain, Liver, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

311533

ATG...

MPF...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping

Brain, R1E, 3T3,
E14, Liver, B_cell,
MEF, v6-5, NSC,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293589	ENSMUST00000142790	Psmd3-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
771245	ENSMUST00000123676	Psmd3-202	protein_coding	Ribo-seq		4	sORFs_org_Mouse
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1287136

AGG...

RLH...

AGG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1285040

ACG...

TML...

ACG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

91038

141

CTG...

LPS...

CTG

Intronic
sORF

3T3, B_cell, Brain,
Testis, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		4	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse

19702

207

GTG...

VRQ...

GTG

Intronic
sORF

3T3, B_cell, Brain,
E14, Testis, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		5	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1284554

195

ATT...

ITC...

ATT

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

649278

168

CTG...

LVL...

CTG

Intronic
sORF

Brain, R1E, 3T3,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

447931

TTG...

LGR...

TTG

Intronic
sORF
Alternative
InCDS
Overlapping

R1E, NSC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

20448

GTG...

VFP...

GTG

Intronic
sORF

Brain, 3T3, MEF,
R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
293589	ENSMUST00000142790	Psmd3-203	retained_intron	Ribo-seq		5	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

91318

CTG...

LVS...

CTG

Intronic
sORF
Upstream

3T3, B_cell, E14,
Liver, Testis, MEF,
Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

8951

CTG...

LII...

CTG

Intronic
sORF

Skin_tumor, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse

18640

162

GTG...

VLR...

GTG

Intronic
sORF

Brain, R1E, 3T3,
B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		4	sORFs_org_Mouse

90946

GTG...

VLL...

GTG

Intronic
sORF
InCDS
Overlapping

R1E, E14, MEF,
Liver, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse

1287616

249

AAG...

KPP...

AAG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1295600

183

AGG...

RKS...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

303504

TTG...

LTS...

TTG

Intronic
sORF
InCDS
Overlapping

Brain, 3T3, BMDC,
E14, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

652335

ATG...

MFC...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping

3T3, B_cell, Liver,
MEF, Brain, R1E,
BMDC, E14, Glioma,
MESC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse Johnstone2016

452406

TTG...

LRP...

TTG

Intronic
sORF
InCDS
Overlapping

3T3, Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

20916

198

GTG...

VEM...

GTG

Intronic
sORF

Brain, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

18457

150

CTG...

LRM...

CTG

Intronic
sORF

Brain, R1E, 3T3,
B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		4	sORFs_org_Mouse

90775

168

CTG...

LSY...

CTG

Intronic
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

447687

CTG...

LGA...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping

B_cell, MEF, Spleen_B_cell,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1529455

213

ATG...

MEL...

ATG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

293588

GTG...

VGQ...

GTG

Alternative
InCDS
Overlapping
sORF
Intronic

NSC, B_cell, E14,
v6-5, 3T3, Brain,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
771245	ENSMUST00000123676	Psmd3-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
293589	ENSMUST00000142790	Psmd3-203	retained_intron	Ribo-seq		3	sORFs_org_Mouse

773808

192

TTG...

LQV...

TTG

Intronic
sORF

Brain, R1E, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

18729

CTG...

LFP...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping

3T3, B_cell, Liver,
MEF, Testis, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

91144

132

CTG...

LLR...

CTG

Intronic
sORF

Testis, 3T3, Brain,
MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
293589	ENSMUST00000142790	Psmd3-203	retained_intron	Ribo-seq		5	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

22033

CTG...

LPE...

CTG

Intronic
sORF

3T3, Brain, R1E,
B_cell, Liver, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		4	sORFs_org_Mouse

773260

TTG...

LSF...

TTG

Intronic
sORF

B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

18567

CTG...

LQL...

CTG

Intronic
sORF

B_cell, Brain, Testis,
3T3, Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		4	sORFs_org_Mouse

1291062

AGG...

RLS...

AGG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

18836

159

GTG...

VHK...

GTG

Intronic
sORF

R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1530842

207

CTG...

LFP...

CTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1286541

141

AAG...

KAA...

AAG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1838488

129

CTG...

LLG...

CTG

Intronic
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

91641

183

GTG...

VRM...

GTG

Intronic
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

18880

105

TTG...

LYD...

TTG

Intronic
sORF

Testis, 3T3, Brain,
MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
293589	ENSMUST00000142790	Psmd3-203	retained_intron	Ribo-seq		5	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

20580

147

CTG...

LIV...

CTG

Intronic
sORF

R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1286229

123

ACG...

TPG...

ACG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

17592

174

CTG...

LRH...

CTG

Intronic
sORF

3T3, Brain, MEF,
R1E, B_cell, E14,
Liver, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
293589	ENSMUST00000142790	Psmd3-203	retained_intron	Ribo-seq		4	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse

454567

ATG...

MPF...

ATG

Alternative
InCDS
Overlapping
sORF

Glioma, Liver, MEF,
MESC, NSC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse Johnstone2016

20270

CTG...

LMN...

CTG

Intronic
sORF

R1E, B_cell, Brain,
E14, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		4	sORFs_org_Mouse

1291223

102

AAG...

KPT...

AAG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

90697

105

CTG...

LQF...

CTG

Intronic
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1289938

AGG...

RQQ...

AGG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

18126

129

CTG...

LDL...

CTG

Intronic
sORF

B_cell, Brain, Testis,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1289794

ACG...

TRA...

ACG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

647641

141

CTG...

LLF...

CTG

Intronic
sORF

3T3, Brain, R1E,
B_cell, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse

1289449

AGG...

RYL...

AGG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

313746

135

CTG...

LPS...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, Brain,
Liver, MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

643725

138

TTG...

LFA...

TTG

Intronic
sORF

B_cell, Brain, Liver,
3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse

447991

GTG...

VQA...

GTG

Intronic
sORF
Alternative
Upstream

3T3, B_cell, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
303355	ENSMUST00000017365	Psmd3-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1288476

ACG...

TMT...

ACG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

20746

171

GTG...

VIE...

GTG

Intronic
sORF

3T3, Brain, R1E,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse

1285029

126

ATC...

IQL...

ATC

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
17467	ENSMUST00000149489	Psmd3-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

8090

CTG...

LDQ...

CTG

Intronic
sORF

3T3, R1E, Skin_tumor,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		4	sORFs_org_Mouse

20499

141

GTG...

VVE...

GTG

Intronic
sORF

Brain, R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
8091	ENSMUST00000152102	Psmd3-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse

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