Gene NCBI:21454 | MetamORF

Gene

ID CARD

NCBI:21454

Aliases

AI528772
c-cpn, CCT, Cct1
Ccta, ENSMUSG00000068039, MGI:98535
NCBI:21454, OFF:Tcp1, p63
Tcp-1, Tcp1, Tp63
TRic

Chromosome

Transcripts

133 ORFs
10 known transcripts
271 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

38748

ENSMUST00000143961

Tcp1-207

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
38374	54	GTG ...	VVA ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	sORF Upstream	R1E
36679	66	GTG ...	VVP ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	sORF Upstream	MEF, R1E
36481	51	GTG ...	VAV ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	sORF Upstream	R1E
481110	84	CTG ...	LQL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, R1E
13083	57	GTG ...	VSW ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, R1E
38747	75	TTG ...	LPT ...	Ribo-seq	TTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, Liver, MEF, NSC, R1E, Testis, v6-5
38160	93	GTG ...	VSF ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF, R1E
39088	42	TTG ...	LAW ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Liver, NSC, Testis, v6-5
39397	66	TTG ...	LLK ...	Ribo-seq	TTG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, Liver, MEF, NSC, R1E, Testis, v6-5
37964	108	TTG ...	LSA ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF, R1E
39355	87	CTG ...	LQL ...	Ribo-seq	CTG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, Liver, MEF, NSC, R1E, Testis, v6-5
39444	51	TTG ...	LGQ ...	Ribo-seq	TTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Liver, MEF, NSC, Testis, v6-5
12880	48	CTG ...	LTC ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, R1E
478455	72	TTG ...	LPT ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, R1E
708145	63	TTG ...	LLK ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, R1E

478333

ENSMUST00000151287

Tcp1-209

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
954512	57	ATC ...	ISG ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
36304	60	ATG ...	MIC ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, Spleen_B_cell
1194805	39	AAG ...	KTK ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
38163	63	TTG ...	LIW ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
955049	30	AGG ...	RTP ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1195357	72	AAG ...	KHA ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
482080	57	ATG ...	MIS ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC, E14, Spleen_B_cell
1193074	57	ATA ...	ISP ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
37552	48	ATG ...	MPE ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
36481	51	GTG ...	VAV ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	sORF Upstream	Spleen_B_cell
482957	54	GTG ...	VAI ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Spleen_B_cell
483994	57	GTG ...	VSW ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, MEF, Spleen_B_cell
955975	36	AGG ...	RLQ ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
957144	66	AAG ...	KFC ...	Ribo-seq	AAG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
37964	108	TTG ...	LSA ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC, Spleen_B_cell
1193361	78	ATC ...	IGY ...	Ribo-seq	ATC	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
36982	72	CTG ...	LVA ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E, Spleen_B_cell
482872	48	CTG ...	LTC ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Spleen_B_cell
1195640	84	ACG ...	TRP ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
705606	51	ATG ...	MGN ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, E14
1191987	33	AGG ...	RPA ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
38160	93	GTG ...	VSF ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC, Spleen_B_cell
39397	66	TTG ...	LLK ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
38747	75	TTG ...	LPT ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
13104	60	GTG ...	VYR ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, R1E, Spleen_B_cell
709555	39	CTG ...	LLR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Liver
481110	84	CTG ...	LQL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
37497	39	TTG ...	LLV ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
12899	63	TTG ...	LVY ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
482238	84	CTG ...	LLQ ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, R1E, Spleen_B_cell
702464	33	CTG ...	LQS ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, MEF
956262	48	AAG ...	KYP ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1195710	111	AGG ...	RWL ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1191418	54	AGG ...	RWL ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
478455	72	TTG ...	LPT ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
36911	48	ATG ...	MQK ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, R1E
481487	63	TTG ...	LMI ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
37406	69	GTG ...	VAL ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, R1E, Spleen_B_cell
13083	57	GTG ...	VSW ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Spleen_B_cell
36607	63	CTG ...	LLN ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
36758	72	CTG ...	LCL ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Spleen_B_cell
38374	54	GTG ...	VVA ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	sORF Upstream	Spleen_B_cell
481187	45	GTG ...	VMK ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Spleen_B_cell
1195442	42	TTG ...	LPA ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF
12946	36	CTG ...	LRN ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, R1E
39355	87	CTG ...	LQL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
13214	93	CTG ...	LRN ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, MEF, R1E, Spleen_B_cell
36679	66	GTG ...	VVP ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	sORF Upstream	Spleen_B_cell
1192641	51	ATC ...	ISS ...	Ribo-seq	ATC	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
36649	75	ATG ...	MLC ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14, Spleen_B_cell
39444	51	TTG ...	LGQ ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
957768	51	AGC ...	SKY ...	Ribo-seq	AGC		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
13193	120	TTG ...	LVY ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, MEF, NSC, R1E
1192878	54	AAG ...	KHA ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
13153	117	GTG ...	VYR ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, E14, MEF, R1E, Spleen_B_cell
38699	93	CTG ...	LPC ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	E14, Spleen_B_cell
703590	39	ATG ...	MLP ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
710492	42	ATG ...	MLL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Liver
707421	69	TTG ...	LVL ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
705064	45	CTG ...	LPC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
12880	48	CTG ...	LTC ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Spleen_B_cell
1195114	48	ATC ...	IVL ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1194898	78	ATC ...	IPQ ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1193183	48	ATA ...	IHR ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
478332	42	ATG ...	MKW ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Spleen_B_cell

795700

ENSMUST00000151715

Tcp1-210

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
12880	48	CTG ...	LTC ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
37964	108	TTG ...	LSA ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
38160	93	GTG ...	VSF ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
706440	72	CTG ...	LQD ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
13083	57	GTG ...	VSW ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
704965	81	CTG ...	LKN ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
795767	48	CTG ...	LFI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
701936	90	CTG ...	LCE ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
38374	54	GTG ...	VVA ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Intronic sORF	B_cell
707935	81	CTG ...	LAD ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
36481	51	GTG ...	VAV ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Intronic sORF	B_cell
12782	129	CTG ...	LKL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
701494	120	CTG ...	LEV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain

12900

ENSMUST00000089024

Tcp1-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
36607	63	CTG ...	LLN ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, E14, R1E, v6-5
36758	72	CTG ...	LCL ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, E14, v6-5
482872	48	CTG ...	LTC ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver, Neutrophil
13104	60	GTG ...	VYR ...	Ribo-seq	GTG		9	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, E14, MEF, Neutrophil, NSC, Skin_tumor, Testis
481487	63	TTG ...	LMI ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5
37964	108	TTG ...	LSA ...	Ribo-seq	TTG		8	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, E14, Liver, MEF, Neutrophil, NSC, v6-5
36304	60	ATG ...	MIC ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
37552	48	ATG ...	MPE ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
703590	39	ATG ...	MLP ...	Ribo-seq	ATG	weak	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
36481	51	GTG ...	VAV ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Alternative sORF Upstream	Liver, Neutrophil
38374	54	GTG ...	VVA ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Alternative sORF Upstream	Liver, Neutrophil
37277	66	TTG ...	LLL ...	Ribo-seq	TTG	weak	4	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, E14, R1E, v6-5
13153	117	GTG ...	VYR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	NSC, Skin_tumor
709267	39	TTG ...	LWK ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
856125	111	TTG ...	LSA ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Liver, MEF
13193	120	TTG ...	LVY ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Skin_tumor
36649	75	ATG ...	MLC ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	Brain, E14, Glioma, Liver, MEF, MESC, v6-5
483994	57	GTG ...	VSW ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver, MEF, Neutrophil
12946	36	CTG ...	LRN ...	Ribo-seq	CTG		7	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, MEF, Neutrophil, NSC, Skin_tumor, Testis
13214	93	CTG ...	LRN ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	NSC, Skin_tumor
482080	57	ATG ...	MIS ...	Ribo-seq	ATG	weak	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
36982	72	CTG ...	LVA ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5
12880	48	CTG ...	LTC ...	Ribo-seq	CTG		12	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, Testis, v6-5
12899	63	TTG ...	LVY ...	Ribo-seq	TTG		9	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, MEF, Neutrophil, Skin_tumor, Testis, v6-5
710492	42	ATG ...	MLL ...	Ribo-seq	ATG		1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
702464	33	CTG ...	LQS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Liver
482957	54	GTG ...	VAI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
13083	57	GTG ...	VSW ...	Ribo-seq	GTG		12	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, Testis, v6-5
705606	51	ATG ...	MGN ...	Ribo-seq	ATG	moderate	1	Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
705064	45	CTG ...	LPC ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC, R1E
36679	66	GTG ...	VVP ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Alternative sORF Upstream	Liver, Neutrophil
482238	84	CTG ...	LLQ ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
37406	69	GTG ...	VAL ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5
38699	93	CTG ...	LPC ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Testis, v6-5
36911	48	ATG ...	MQK ...	Ribo-seq	ATG	weak	1	Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
38160	93	GTG ...	VSF ...	Ribo-seq	GTG		8	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, E14, Liver, MEF, Neutrophil, NSC, v6-5

36105

ENSMUST00000129632

Tcp1-202

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
706256	120	GTG ...	VKR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
707935	81	CTG ...	LAD ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	3T3
478332	42	ATG ...	MKW ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
706337	105	CTG ...	LAV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
37497	39	TTG ...	LLV ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, NSC, Testis
37891	78	GTG ...	VTM ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Testis
36363	30	TTG ...	LTS ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Testis
707427	75	ATG ...	MVS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	3T3
422123	126	AAG ...	KLL ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Intronic sORF	C2C12
701332	204	TTG ...	LVH ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	3T3
37964	108	TTG ...	LSA ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Intronic sORF	3T3, C2C12, Testis
12880	48	CTG ...	LTC ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
703858	126	CTG ...	LLV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
797102	60	CTG ...	LSI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
38374	54	GTG ...	VVA ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Intronic sORF	3T3, Testis
799111	159	CTG ...	LQL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
707645	132	ATG ...	MLI ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	3T3
702464	33	CTG ...	LQS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
1541844	141	GTG ...	VKS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
36911	48	ATG ...	MQK ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	Intronic sORF	3T3, Brain, NSC, Testis
37552	48	ATG ...	MPE ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
13104	60	GTG ...	VYR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	3T3
481487	63	TTG ...	LMI ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
387030	123	GTG ...	VVK ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Brain
701936	90	CTG ...	LCE ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
385152	108	TTG ...	LEL ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Brain
37659	57	CTG ...	LIN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	3T3
13083	57	GTG ...	VSW ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
706506	39	TTG ...	LAW ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	3T3
481187	45	GTG ...	VMK ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
708914	30	CTG ...	LVP ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	3T3
12782	129	CTG ...	LKL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
703615	33	GTG ...	VNP ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
12946	36	CTG ...	LRN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	3T3
705606	51	ATG ...	MGN ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, BMDC
701102	48	GTG ...	VVI ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	3T3, NSC
482238	84	CTG ...	LLQ ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, NSC
38098	120	CTG ...	LST ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, NSC, Testis
702051	93	GTG ...	VVP ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
701494	120	CTG ...	LEV ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
478455	72	TTG ...	LPT ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	3T3
702586	36	CTG ...	LPR ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
37277	66	TTG ...	LLL ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
704965	81	CTG ...	LKN ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
36651	96	CTG ...	LTP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Testis
704514	48	TTG ...	LGQ ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	3T3
1542115	132	CTG ...	LKF ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
954962	63	AAG ...	KLR ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Intronic sORF	BMDC
36982	72	CTG ...	LVA ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Intronic sORF	3T3, Brain, NSC, Testis
703590	39	ATG ...	MLP ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
701213	72	CTG ...	LVA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
705722	102	TTG ...	LEG ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
705064	45	CTG ...	LPC ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
708486	99	GTG ...	VNA ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
702250	120	GTG ...	VIP ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
709267	39	TTG ...	LWK ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
36758	72	CTG ...	LCL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
707421	69	TTG ...	LVL ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	3T3
13041	114	GTG ...	VRY ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	3T3
37406	69	GTG ...	VAL ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, NSC, Testis
954512	57	ATC ...	ISG ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	Intronic sORF	BMDC
38163	63	TTG ...	LIW ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Testis
702573	114	TTG ...	LFF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	3T3
422128	165	GTG ...	VFE ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, C2C12
36277	69	TTG ...	LGQ ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Testis
956262	48	AAG ...	KYP ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	Intronic sORF	BMDC
482080	57	ATG ...	MIS ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, BMDC
708145	63	TTG ...	LLK ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	3T3
36104	81	CTG ...	LQK ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	3T3, Brain, Testis
36481	51	GTG ...	VAV ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Intronic sORF	3T3, NSC, Testis
955975	36	AGG ...	RLQ ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Intronic sORF	BMDC
36932	111	CTG ...	LAN ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, NSC, R1E, Testis
36607	63	CTG ...	LLN ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
955049	30	AGG ...	RTP ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Intronic sORF	BMDC
36649	75	ATG ...	MLC ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
12860	93	CTG ...	LII ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	3T3
954874	60	ATT ...	IWS ...	Ribo-seq	ATT	weak	1	sORFs_org_Mouse	Intronic sORF	BMDC
38160	93	GTG ...	VSF ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Testis
36679	66	GTG ...	VVP ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Intronic sORF	3T3, Testis
36720	219	CTG ...	LAT ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	NSC, Testis
706440	72	CTG ...	LQD ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
705366	102	TTG ...	LKS ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
36304	60	ATG ...	MIC ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	Intronic sORF	3T3, BMDC, R1E, Testis
954548	33	ATC ...	ICF ...	Ribo-seq	ATC	weak	1	sORFs_org_Mouse	Intronic sORF	BMDC
481110	84	CTG ...	LQL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	3T3
12899	63	TTG ...	LVY ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	3T3, NSC

954273

ENSMUST00000137289

Tcp1-205

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
12899	63	TTG ...	LVY ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	MEF
13104	60	GTG ...	VYR ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	MEF
12946	36	CTG ...	LRN ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
1677907	99	ATG ...	MAM ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	MEF
36758	72	CTG ...	LCL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
36104	81	CTG ...	LQK ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
701102	48	GTG ...	VVI ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, MEF
37552	48	ATG ...	MPE ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	MEF
36649	75	ATG ...	MLC ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	BMDC, MEF

12783

ENSMUST00000133003

Tcp1-203

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
706440	72	CTG ...	LQD ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	E14
1194521	39	AAG ...	KTK ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Intronic sORF	E14
1192939	48	ATT ...	IHP ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Intronic sORF	E14
12860	93	CTG ...	LII ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
13041	114	GTG ...	VRY ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
1192632	30	AAG ...	KRC ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
12782	129	CTG ...	LKL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Skin_tumor
12880	48	CTG ...	LTC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Skin_tumor
1190912	87	ATT ...	INT ...	Ribo-seq	ATT	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
1191473	30	ATT ...	ISG ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Intronic sORF	E14
13083	57	GTG ...	VSW ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Skin_tumor
704965	81	CTG ...	LKN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	E14

706313

ENSMUST00000147724

Tcp1-208

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
706506	39	TTG ...	LAW ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	MEF
1194365	132	ACG ...	TVS ...	Ribo-seq	ACG		1	sORFs_org_Mouse	ncRNA sORF	E14
704514	48	TTG ...	LGQ ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	MEF
38374	54	GTG ...	VVA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	MEF
38160	93	GTG ...	VSF ...	Ribo-seq	GTG		3	sORFs_org_Mouse	ncRNA sORF	BMDC, E14, MEF
954561	66	AAG ...	KFC ...	Ribo-seq	AAG		2	sORFs_org_Mouse	ncRNA sORF	BMDC, E14
955733	114	ATT ...	IVK ...	Ribo-seq	ATT		1	sORFs_org_Mouse	ncRNA sORF	BMDC
708145	63	TTG ...	LLK ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	MEF
36679	66	GTG ...	VVP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	E14
706312	168	TTG ...	LRL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
1192176	78	ATC ...	IPQ ...	Ribo-seq	ATC		1	sORFs_org_Mouse	ncRNA sORF	E14
37964	108	TTG ...	LSA ...	Ribo-seq	TTG		3	sORFs_org_Mouse	ncRNA sORF	BMDC, E14, MEF
478455	72	TTG ...	LPT ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	MEF
1190352	132	ATC ...	ILK ...	Ribo-seq	ATC		1	sORFs_org_Mouse	ncRNA sORF	E14
481110	84	CTG ...	LQL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	MEF
36481	51	GTG ...	VAV ...	Ribo-seq	GTG		3	sORFs_org_Mouse	ncRNA sORF	BMDC, E14, MEF
1193857	30	ATA ...	IKC ...	Ribo-seq	ATA		1	sORFs_org_Mouse	ncRNA sORF	E14
1192027	90	GTG ...	VES ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	E14

795648

ENSMUST00000138709

Tcp1-206

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
481487	63	TTG ...	LMI ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	B_cell
12899	63	TTG ...	LVY ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
12946	36	CTG ...	LRN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
13104	60	GTG ...	VYR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
37406	69	GTG ...	VAL ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	B_cell
36104	81	CTG ...	LQK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
701102	48	GTG ...	VVI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
36982	72	CTG ...	LVA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	B_cell

12861

ENSMUST00000134665

Tcp1-204

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
36607	63	CTG ...	LLN ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Testis
37552	48	ATG ...	MPE ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	B_cell, Testis
37054	258	GTG ...	VLA ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, Testis
36649	75	ATG ...	MLC ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	B_cell, Testis
36758	72	CTG ...	LCL ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Testis
37659	57	CTG ...	LIN ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Testis
37277	66	TTG ...	LLL ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Testis
13041	114	GTG ...	VRY ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Skin_tumor, Testis
12860	93	CTG ...	LII ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Skin_tumor, Testis

ORFs

133 ORFs
10 known transcripts
271 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

38374

GTG...

VVA...

GTG

sORF
Upstream
Intronic
Alternative
ncRNA

R1E, 3T3, Testis,
Liver, Neutrophil, MEF,
Spleen_B_cell, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38748	ENSMUST00000143961	Tcp1-207	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
795700	ENSMUST00000151715	Tcp1-210	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

36679

GTG...

VVP...

GTG

sORF
Upstream
ncRNA
Alternative
Intronic

MEF, R1E, E14,
Spleen_B_cell, Liver, Neutrophil,
3T3, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38748	ENSMUST00000143961	Tcp1-207	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse

954512

ATC...

ISG...

ATC

InCDS
Overlapping
sORF
Intronic

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

12880

CTG...

LTC...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping

B_cell, Brain, 3T3,
E14, Liver, MEF,
Neutrophil, NSC, Testis,
v6-5, Skin_tumor, R1E,
BMDC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
795700	ENSMUST00000151715	Tcp1-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		12	sORFs_org_Mouse
12783	ENSMUST00000133003	Tcp1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
38748	ENSMUST00000143961	Tcp1-207	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse

36607

CTG...

LLN...

CTG

InCDS
Overlapping
sORF
Intronic
Alternative

Brain, E14, R1E,
v6-5, B_cell, Testis,
BMDC, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
12861	ENSMUST00000134665	Tcp1-204	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

706256

120

GTG...

VKR...

GTG

Intronic
sORF

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

12899

TTG...

LVY...

TTG

Intronic
sORF
Alternative
InCDS
Overlapping

MEF, B_cell, R1E,
Brain, Neutrophil, Skin_tumor,
Testis, v6-5, 3T3,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
954273	ENSMUST00000137289	Tcp1-205	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
795648	ENSMUST00000138709	Tcp1-206	retained_intron	Ribo-seq		1	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		9	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

36758

CTG...

LCL...

CTG

InCDS
Overlapping
sORF
Intronic
Alternative

Brain, E14, v6-5,
MEF, B_cell, Testis,
BMDC, Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
954273	ENSMUST00000137289	Tcp1-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
12861	ENSMUST00000134665	Tcp1-204	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

36304

ATG...

MIC...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic

E14, Spleen_B_cell, Glioma,
Liver, MEF, MESC,
3T3, BMDC, R1E,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse Johnstone2016
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse

706440

CTG...

LQD...

CTG

Intronic
sORF

E14, B_cell, Brain,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12783	ENSMUST00000133003	Tcp1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
795700	ENSMUST00000151715	Tcp1-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1194805

AAG...

KTK...

AAG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

707935

CTG...

LAD...

CTG

Intronic
sORF

3T3, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
795700	ENSMUST00000151715	Tcp1-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse

38163

TTG...

LIW...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic

E14, 3T3, B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

478332

ATG...

MKW...

ATG

Intronic
sORF
InCDS
Overlapping

3T3, B_cell, BMDC,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

482872

CTG...

LTC...

CTG

Alternative
InCDS
Overlapping
sORF

Liver, Neutrophil, 3T3,
B_cell, BMDC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		4	sORFs_org_Mouse

706337

105

CTG...

LAV...

CTG

Intronic
sORF

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

37964

108

TTG...

LSA...

TTG

Intronic
sORF
Alternative
Overlapping
Upstream
ncRNA

B_cell, Brain, 3T3,
C2C12, Testis, E14,
Liver, MEF, Neutrophil,
NSC, v6-5, BMDC,
Spleen_B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
795700	ENSMUST00000151715	Tcp1-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		3	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		8	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse
38748	ENSMUST00000143961	Tcp1-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

37497

TTG...

LLV...

TTG

Intronic
sORF
Alternative
InCDS
Overlapping

3T3, NSC, Testis,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1194521

AAG...

KTK...

AAG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12783	ENSMUST00000133003	Tcp1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

955049

AGG...

RTP...

AGG

Alternative
InCDS
Overlapping
sORF
Intronic

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

37891

GTG...

VTM...

GTG

Intronic
sORF

B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

13104

GTG...

VYR...

GTG

Intronic
sORF
InCDS
Overlapping
Alternative

MEF, Brain, E14,
Neutrophil, NSC, Skin_tumor,
Testis, 3T3, B_cell,
R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
954273	ENSMUST00000137289	Tcp1-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		9	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
795648	ENSMUST00000138709	Tcp1-206	retained_intron	Ribo-seq		1	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1195357

AAG...

KHA...

AAG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

36363

TTG...

LTS...

TTG

Intronic
sORF

3T3, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

706506

TTG...

LAW...

TTG

ncRNA
sORF
Intronic

MEF, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

481487

TTG...

LMI...

TTG

Intronic
sORF
InCDS
Overlapping
Alternative

B_cell, MEF, v6-5,
3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
795648	ENSMUST00000138709	Tcp1-206	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

12946

CTG...

LRN...

CTG

Intronic
sORF
InCDS
Overlapping
Alternative

MEF, B_cell, 3T3,
Brain, Neutrophil, NSC,
Skin_tumor, Testis, E14,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
954273	ENSMUST00000137289	Tcp1-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
795648	ENSMUST00000138709	Tcp1-206	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		7	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse

707427

ATG...

MVS...

ATG

Intronic
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

422123

126

AAG...

KLL...

AAG

Intronic
sORF

C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

701332

204

TTG...

LVH...

TTG

Intronic
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

482080

ATG...

MIS...

ATG

InCDS
Overlapping
sORF
Alternative
Intronic

B_cell, BMDC, E14,
Spleen_B_cell, Glioma, Liver,
MEF, MESC, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	weak	1	Johnstone2016
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

38160

GTG...

VSF...

GTG

Intronic
sORF
ncRNA
Alternative
Overlapping
Upstream

B_cell, Brain, BMDC,
E14, MEF, Spleen_B_cell,
R1E, Liver, Neutrophil,
NSC, v6-5, 3T3,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
795700	ENSMUST00000151715	Tcp1-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse
38748	ENSMUST00000143961	Tcp1-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		8	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1193074

ATA...

ISP...

ATA

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1194365

132

ACG...

TVS...

ACG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

704514

TTG...

LGQ...

TTG

ncRNA
sORF
Intronic

MEF, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

703858

126

CTG...

LLV...

CTG

Intronic
sORF

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

797102

CTG...

LSI...

CTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

37552

ATG...

MPE...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic

BMDC, E14, Brain,
3T3, B_cell, Testis,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
12861	ENSMUST00000134665	Tcp1-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
954273	ENSMUST00000137289	Tcp1-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

36481

GTG...

VAV...

GTG

sORF
Upstream
Alternative
Intronic
ncRNA

Spleen_B_cell, Liver, Neutrophil,
R1E, B_cell, 3T3,
NSC, Testis, BMDC,
E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
38748	ENSMUST00000143961	Tcp1-207	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
795700	ENSMUST00000151715	Tcp1-210	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

482957

GTG...

VAI...

GTG

Alternative
InCDS
Overlapping
sORF

MEF, Spleen_B_cell, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1677907

ATG...

MAM...

ATG

Intronic
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
954273	ENSMUST00000137289	Tcp1-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1192939

ATT...

IHP...

ATT

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12783	ENSMUST00000133003	Tcp1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

799111

159

CTG...

LQL...

CTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

707645

132

ATG...

MLI...

ATG

Intronic
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

483994

GTG...

VSW...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
MEF, Spleen_B_cell, Liver,
Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		5	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

702464

CTG...

LQS...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping

3T3, Brain, B_cell,
BMDC, MEF, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

12860

CTG...

LII...

CTG

Intronic
sORF

MEF, B_cell, Brain,
Skin_tumor, Testis, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12783	ENSMUST00000133003	Tcp1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
12861	ENSMUST00000134665	Tcp1-204	retained_intron	Ribo-seq		4	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

13041

114

GTG...

VRY...

GTG

Intronic
sORF

MEF, B_cell, Brain,
Skin_tumor, Testis, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12783	ENSMUST00000133003	Tcp1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
12861	ENSMUST00000134665	Tcp1-204	retained_intron	Ribo-seq		4	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

955975

AGG...

RLQ...

AGG

Alternative
InCDS
Overlapping
sORF
Intronic

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

957144

AAG...

KFC...

AAG

Alternative
InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1541844

141

GTG...

VKS...

GTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

36911

ATG...

MQK...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping

3T3, Brain, NSC,
Testis, E14, R1E,
Glioma, Liver, MEF,
MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	weak	1	Johnstone2016

703590

ATG...

MLP...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic

Glioma, Liver, MEF,
MESC, 3T3, B_cell,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	weak	1	Johnstone2016
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

387030

123

GTG...

VVK...

GTG

Intronic
sORF

3T3, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		3	sORFs_org_Mouse

701936

CTG...

LCE...

CTG

Intronic
sORF

3T3, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
795700	ENSMUST00000151715	Tcp1-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse

481110

CTG...

LQL...

CTG

Alternative
InCDS
Overlapping
sORF
ncRNA
Intronic

MEF, R1E, Spleen_B_cell,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38748	ENSMUST00000143961	Tcp1-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

385152

108

TTG...

LEL...

TTG

Intronic
sORF

3T3, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		3	sORFs_org_Mouse

13083

GTG...

VSW...

GTG

Alternative
InCDS
Overlapping
sORF
Intronic

MEF, R1E, 3T3,
B_cell, Brain, BMDC,
Spleen_B_cell, E14, Liver,
Neutrophil, NSC, Testis,
v6-5, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38748	ENSMUST00000143961	Tcp1-207	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
795700	ENSMUST00000151715	Tcp1-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		12	sORFs_org_Mouse
12783	ENSMUST00000133003	Tcp1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1193361

ATC...

IGY...

ATC

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

36982

CTG...

LVA...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

R1E, Spleen_B_cell, MEF,
v6-5, 3T3, Brain,
NSC, Testis, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
795648	ENSMUST00000138709	Tcp1-206	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

37659

CTG...

LIN...

CTG

Intronic
sORF

3T3, B_cell, Brain,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
12861	ENSMUST00000134665	Tcp1-204	retained_intron	Ribo-seq		3	sORFs_org_Mouse

38747

TTG...

LPT...

TTG

Alternative
InCDS
Overlapping
sORF

Brain, E14, Liver,
MEF, NSC, R1E,
Testis, v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38748	ENSMUST00000143961	Tcp1-207	protein_coding	Ribo-seq		9	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse

954561

AAG...

KFC...

AAG

ncRNA
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

1195640

ACG...

TRP...

ACG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

481187

GTG...

VMK...

GTG

Intronic
sORF
InCDS
Overlapping

3T3, B_cell, BMDC,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

708914

CTG...

LVP...

CTG

Intronic
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

705606

ATG...

MGN...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic

B_cell, E14, 3T3,
BMDC, Glioma, Liver,
MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	moderate	1	Johnstone2016

37277

TTG...

LLL...

TTG

InCDS
Overlapping
sORF
Intronic

Brain, E14, R1E,
v6-5, 3T3, B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
12861	ENSMUST00000134665	Tcp1-204	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse

1191987

AGG...

RPA...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

13153

117

GTG...

VYR...

GTG

InCDS
Overlapping
sORF
Alternative

NSC, Skin_tumor, B_cell,
E14, MEF, R1E,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		5	sORFs_org_Mouse

37054

258

GTG...

VLA...

GTG

Intronic
sORF

Brain, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12861	ENSMUST00000134665	Tcp1-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

12782

129

CTG...

LKL...

CTG

Intronic
sORF

3T3, Skin_tumor, B_cell,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
12783	ENSMUST00000133003	Tcp1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
795700	ENSMUST00000151715	Tcp1-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse

709267

TTG...

LWK...

TTG

InCDS
Overlapping
sORF
Intronic

MEF, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

36649

ATG...

MLC...

ATG

Intronic
sORF
InCDS
Overlapping
Alternative

B_cell, Testis, Brain,
E14, Glioma, Liver,
MEF, MESC, v6-5,
BMDC, Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12861	ENSMUST00000134665	Tcp1-204	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse Johnstone2016
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
954273	ENSMUST00000137289	Tcp1-205	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

856125

111

TTG...

LSA...

TTG

Alternative
Overlapping
sORF
Upstream

Liver, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

955733

114

ATT...

IVK...

ATT

ncRNA
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

39397

TTG...

LLK...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, E14,
Liver, MEF, NSC,
R1E, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse
38748	ENSMUST00000143961	Tcp1-207	protein_coding	Ribo-seq		10	sORFs_org_Mouse

13193

120

TTG...

LVY...

TTG

InCDS
Overlapping
sORF
Alternative

Skin_tumor, B_cell, BMDC,
MEF, NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		5	sORFs_org_Mouse

703615

GTG...

VNP...

GTG

Intronic
sORF

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

709555

CTG...

LLR...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse

701102

GTG...

VVI...

GTG

Intronic
sORF

3T3, NSC, Brain,
MEF, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
954273	ENSMUST00000137289	Tcp1-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
795648	ENSMUST00000138709	Tcp1-206	retained_intron	Ribo-seq		1	sORFs_org_Mouse

708145

TTG...

LLK...

TTG

ncRNA
sORF
Intronic
Alternative
InCDS
Overlapping

MEF, 3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
38748	ENSMUST00000143961	Tcp1-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse

704965

CTG...

LKN...

CTG

Intronic
sORF

B_cell, Brain, 3T3,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
795700	ENSMUST00000151715	Tcp1-210	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
12783	ENSMUST00000133003	Tcp1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1192632

AAG...

KRC...

AAG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12783	ENSMUST00000133003	Tcp1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

706312

168

TTG...

LRL...

TTG

ncRNA
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

482238

CTG...

LLQ...

CTG

Intronic
sORF
InCDS
Overlapping
Alternative

3T3, B_cell, NSC,
BMDC, R1E, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

38098

120

CTG...

LST...

CTG

Intronic
sORF

3T3, B_cell, NSC,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		4	sORFs_org_Mouse

13214

CTG...

LRN...

CTG

InCDS
Overlapping
sORF
Alternative

NSC, Skin_tumor, B_cell,
BMDC, MEF, R1E,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		5	sORFs_org_Mouse

702051

GTG...

VVP...

GTG

Intronic
sORF

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

701494

120

CTG...

LEV...

CTG

Intronic
sORF

3T3, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
795700	ENSMUST00000151715	Tcp1-210	retained_intron	Ribo-seq		2	sORFs_org_Mouse

36104

CTG...

LQK...

CTG

Intronic
sORF

Brain, B_cell, 3T3,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
954273	ENSMUST00000137289	Tcp1-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
795648	ENSMUST00000138709	Tcp1-206	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		3	sORFs_org_Mouse

39088

TTG...

LAW...

TTG

Alternative
InCDS
Overlapping
sORF

Brain, Liver, NSC,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38748	ENSMUST00000143961	Tcp1-207	protein_coding	Ribo-seq		5	sORFs_org_Mouse

478455

TTG...

LPT...

TTG

Intronic
sORF
Alternative
InCDS
Overlapping
ncRNA

3T3, Spleen_B_cell, MEF,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
38748	ENSMUST00000143961	Tcp1-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse

795767

CTG...

LFI...

CTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
795700	ENSMUST00000151715	Tcp1-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

956262

AAG...

KYP...

AAG

Alternative
InCDS
Overlapping
sORF
Intronic

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1195710

111

AGG...

RWL...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1191418

AGG...

RWL...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

702586

CTG...

LPR...

CTG

Intronic
sORF

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

36651

CTG...

LTP...

CTG

Intronic
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

37406

GTG...

VAL...

GTG

Alternative
InCDS
Overlapping
sORF
Intronic

E14, R1E, Spleen_B_cell,
B_cell, 3T3, NSC,
Testis, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
795648	ENSMUST00000138709	Tcp1-206	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

1192176

ATC...

IPQ...

ATC

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

710492

ATG...

MLL...

ATG

Alternative
InCDS
Overlapping
sORF

Glioma, Liver, MEF,
MESC, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		1	Johnstone2016
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1542115

132

CTG...

LKF...

CTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

954962

AAG...

KLR...

AAG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

701213

CTG...

LVA...

CTG

Intronic
sORF

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

705722

102

TTG...

LEG...

TTG

Intronic
sORF

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

705064

CTG...

LPC...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping

3T3, B_cell, E14,
MEF, NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

708486

GTG...

VNA...

GTG

Intronic
sORF

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

702250

120

GTG...

VIP...

GTG

Intronic
sORF

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1195442

TTG...

LPA...

TTG

Alternative
InCDS
Overlapping
sORF

E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse

39355

CTG...

LQL...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, E14,
Liver, MEF, NSC,
R1E, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse
38748	ENSMUST00000143961	Tcp1-207	protein_coding	Ribo-seq		10	sORFs_org_Mouse

707421

TTG...

LVL...

TTG

Intronic
sORF
Alternative
InCDS
Overlapping

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

1190912

ATT...

INT...

ATT

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12783	ENSMUST00000133003	Tcp1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1192641

ATC...

ISS...

ATC

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1191473

ATT...

ISG...

ATT

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12783	ENSMUST00000133003	Tcp1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

702573

114

TTG...

LFF...

TTG

Intronic
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

39444

TTG...

LGQ...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, Liver,
MEF, NSC, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse
38748	ENSMUST00000143961	Tcp1-207	protein_coding	Ribo-seq		7	sORFs_org_Mouse

422128

165

GTG...

VFE...

GTG

Intronic
sORF

Brain, C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

36277

TTG...

LGQ...

TTG

Intronic
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

957768

AGC...

SKY...

AGC

Alternative
InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1190352

132

ATC...

ILK...

ATC

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

38699

CTG...

LPC...

CTG

Alternative
InCDS
Overlapping
sORF

Testis, v6-5, E14,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
12900	ENSMUST00000089024	Tcp1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse

36932

111

CTG...

LAN...

CTG

Intronic
sORF

3T3, B_cell, NSC,
R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		5	sORFs_org_Mouse

1192878

AAG...

KHA...

AAG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1193857

ATA...

IKC...

ATA

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

954874

ATT...

IWS...

ATT

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

36720

219

CTG...

LAT...

CTG

Intronic
sORF

NSC, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

705366

102

TTG...

LKS...

TTG

Intronic
sORF

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1195114

ATC...

IVL...

ATC

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1192027

GTG...

VES...

GTG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
706313	ENSMUST00000147724	Tcp1-208	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

954548

ATC...

ICF...

ATC

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36105	ENSMUST00000129632	Tcp1-202	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

1194898

ATC...

IPQ...

ATC

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1193183

ATA...

IHR...

ATA

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
478333	ENSMUST00000151287	Tcp1-209	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

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