Gene NCBI:20624 | MetamORF

Gene

ID CARD

NCBI:20624

Aliases

116kDa
Eftud2, ENSMUSG00000020929, MGI:1336880
NCBI:20624, OFF:Eftud2, Snrp116
U5-116kD

Chromosome

Transcripts

104 ORFs
11 known transcripts
201 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

640725

ENSMUST00000138483

Eftud2-206

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
449215	51	ATG ...	MFF ...	Ribo-seq	ATG		1	sORFs_org_Mouse	NMD sORF	B_cell
447026	30	CTG ...	LTS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	NMD sORF	3T3, B_cell
643320	165	GTG ...	VGE ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	3T3
452157	45	TTG ...	LFN ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	NMD sORF	B_cell
642855	126	GTG ...	VLH ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	3T3
18595	45	CTG ...	LME ...	Ribo-seq	CTG		2	sORFs_org_Mouse	NMD sORF	3T3, MEF
649373	114	ATG ...	MTW ...	Ribo-seq	ATG		1	sORFs_org_Mouse	NMD sORF	3T3
641370	69	ATG ...	MRS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	NMD sORF	3T3
446805	66	GTG ...	VKT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	NMD sORF	3T3, MEF
648743	39	ATG ...	MEW ...	Ribo-seq	ATG		1	sORFs_org_Mouse	NMD sORF	3T3
645479	123	CTG ...	LHE ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	3T3
649328	162	TTG ...	LCF ...	Ribo-seq	TTG		2	sORFs_org_Mouse	NMD sORF	3T3, Brain
653676	129	GTG ...	VVL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	3T3
649598	72	CTG ...	LMR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	3T3
646220	63	ATG ...	MRT ...	Ribo-seq	ATG		1	sORFs_org_Mouse	NMD sORF	3T3
642572	132	ATG ...	MRT ...	Ribo-seq	ATG		1	sORFs_org_Mouse	NMD sORF	3T3
650338	42	GTG ...	VDF ...	Ribo-seq	GTG		2	sORFs_org_Mouse	NMD sORF	3T3, B_cell
644337	57	CTG ...	LAC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	3T3

769135

ENSMUST00000141273

Eftud2-207

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
774351	72	GTG ...	VTF ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, BMDC
771375	93	CTG ...	LAA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
769498	132	CTG ...	LGE ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
772983	87	GTG ...	VAD ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, BMDC
772583	36	CTG ...	LCF ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
773780	111	GTG ...	VNR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
769947	81	CTG ...	LIE ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
771974	54	GTG ...	VVE ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, BMDC
769134	96	CTG ...	LLA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
774903	54	GTG ...	VKT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	B_cell

455694

ENSMUST00000107060

Eftud2-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1602352	222	ATG ...	MMS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
777499	132	CTG ...	LLG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
1126952	87	GTG ...	VYQ ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, v6-5
457586	231	CTG ...	LTC ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil, Spleen_B_cell, v6-5
1337951	141	ATG ...	MHP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
771030	93	ATG ...	MTT ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	NSC
8698	51	ATG ...	MKM ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5
658769	57	CTG ...	LQI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
657055	72	CTG ...	LMR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, v6-5
657355	57	CTG ...	LAC ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, v6-5
644337	57	CTG ...	LAC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
452157	45	TTG ...	LFN ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF
777715	129	CTG ...	LGC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
1846027	42	CTG ...	LLF ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
649598	72	CTG ...	LMR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
457144	189	TTG ...	LIL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
8107	54	CTG ...	LMK ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5
8733	45	ATG ...	MMM ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5
641370	69	ATG ...	MRS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
456436	213	TTG ...	LGI ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
1598294	45	CTG ...	LGS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
1123762	33	CTG ...	LQK ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, v6-5
648743	39	ATG ...	MEW ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
1528283	66	CTG ...	LLL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
1532355	135	CTG ...	LSI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
20620	60	TTG ...	LIL ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5
656731	69	ATG ...	MRS ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, v6-5
455693	183	CTG ...	LMK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
446292	57	CTG ...	LFR ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF
1337471	81	GTG ...	VCA ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
447026	30	CTG ...	LTS ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC, v6-5
8724	39	ATG ...	MNW ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5
1532038	123	CTG ...	LWI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
457612	219	ATG ...	MSL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Spleen_B_cell
296456	90	ATG ...	MSL ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5
654652	225	ATG ...	MHP ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14
7940	42	ATG ...	MMN ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5
91609	72	TTG ...	LDQ ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5
308988	102	CTG ...	LTC ...	Ribo-seq	CTG		5	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, NSC, v6-5
649373	114	ATG ...	MTW ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	NSC
295182	93	ATG ...	MMS ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5
20237	84	TTG ...	LGI ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5

18596

ENSMUST00000123833

Eftud2-203

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
643320	165	GTG ...	VGE ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain
20620	60	TTG ...	LIL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	MEF
933372	171	TTG ...	LYD ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	BMDC, MEF
91609	72	TTG ...	LDQ ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	MEF, Spleen_B_cell
1528421	102	ATG ...	MSL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	Brain
447026	30	CTG ...	LTS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
451706	156	CTG ...	LLS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
646220	63	ATG ...	MRT ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
8107	54	CTG ...	LMK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	MEF
20237	84	TTG ...	LGI ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	MEF, Spleen_B_cell
8724	39	ATG ...	MNW ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	MEF, Spleen_B_cell
7940	42	ATG ...	MMN ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	MEF, Spleen_B_cell
931674	105	ATA ...	ILT ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Intronic sORF	BMDC
295182	93	ATG ...	MMS ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Intronic sORF	BMDC, MEF, Spleen_B_cell
452157	45	TTG ...	LFN ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Intronic sORF	MEF, Spleen_B_cell
8733	45	ATG ...	MMM ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	MEF, Spleen_B_cell
653676	129	GTG ...	VVL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain
8698	51	ATG ...	MKM ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	BMDC, MEF
642855	126	GTG ...	VLH ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain
446805	66	GTG ...	VKT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Spleen_B_cell
18595	45	CTG ...	LME ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, Spleen_B_cell, Testis
308988	102	CTG ...	LTC ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	MEF, Spleen_B_cell
1528188	96	CTG ...	LLF ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
296456	90	ATG ...	MSL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	MEF, Spleen_B_cell
20381	84	GTG ...	VYG ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
446292	57	CTG ...	LFR ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Spleen_B_cell
449215	51	ATG ...	MFF ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell

7941

ENSMUST00000147368

Eftud2-209

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
642572	132	ATG ...	MRT ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	B_cell, R1E
308988	102	CTG ...	LTC ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, BMDC, C2C12
451706	156	CTG ...	LLS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, R1E
20620	60	TTG ...	LIL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, C2C12
419158	75	ATA ...	ILD ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Intronic sORF	C2C12
8733	45	ATG ...	MMM ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Skin_tumor
446805	66	GTG ...	VKT ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	Intronic sORF	B_cell, BMDC, R1E
8698	51	ATG ...	MKM ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Skin_tumor
20237	84	TTG ...	LGI ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, C2C12
18595	45	CTG ...	LME ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	B_cell, BMDC, R1E
91609	72	TTG ...	LDQ ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
642855	126	GTG ...	VLH ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, R1E
649373	114	ATG ...	MTW ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	B_cell, R1E
653676	129	GTG ...	VVL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, R1E
296456	90	ATG ...	MSL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	B_cell
295182	93	ATG ...	MMS ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	B_cell, C2C12
645479	123	CTG ...	LHE ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, R1E
771030	93	ATG ...	MTT ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	B_cell, R1E
8724	39	ATG ...	MNW ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Skin_tumor
8107	54	CTG ...	LMK ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Skin_tumor
20381	84	GTG ...	VYG ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	R1E, Testis
643320	165	GTG ...	VGE ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Neutrophil, R1E
646220	63	ATG ...	MRT ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Intronic sORF	B_cell, R1E
20038	69	GTG ...	VET ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Testis
7940	42	ATG ...	MMN ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Skin_tumor

934955

ENSMUST00000131678

Eftud2-204

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1696053	36	CTG ...	LAA ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	MEF
1036082	162	GTG ...	VVG ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
994972	150	GTG ...	VDT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
934954	99	GTG ...	VEF ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	BMDC
995038	138	CTG ...	LPR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
1696724	51	TTG ...	LLK ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	MEF
993842	159	GTG ...	VGD ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, Liver
994625	126	CTG ...	LDE ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
1696404	72	GTG ...	VTL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	MEF

775964

ENSMUST00000021306

Eftud2-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1602352	222	ATG ...	MMS ...	Ribo-seq	ATG		1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
777715	129	CTG ...	LGC ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, MEF
656731	69	ATG ...	MRS ...	Ribo-seq	ATG		1	Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
776971	174	ATG ...	MMN ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
777585	225	ATG ...	MMS ...	Ribo-seq	ATG		3	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	B_cell, Glioma, Liver, MEF, MESC
778108	177	ATG ...	MMM ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
776251	171	ATG ...	MNW ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
777652	183	ATG ...	MKM ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
775963	186	CTG ...	LMK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
777195	192	TTG ...	LIL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
777499	132	CTG ...	LLG ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, MEF
778214	204	TTG ...	LDQ ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, MEF
777066	234	CTG ...	LTC ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, MEF
654652	225	ATG ...	MHP ...	Ribo-seq	ATG		1	Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
1697185	30	CTG ...	LSI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF
776212	222	ATG ...	MSL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, MEF
776551	216	TTG ...	LGI ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, MEF
776890	57	CTG ...	LTS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
1694901	96	CTG ...	LCD ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF

292439

ENSMUST00000148209

Eftud2-210

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1291466	78	ATT ...	IIL ...	Ribo-seq	ATT	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
296456	90	ATG ...	MSL ...	Ribo-seq	ATG	moderate	6	sORFs_org_Mouse	Intronic sORF	3T3, Brain, E14, MEF, Neutrophil, R1E
8107	54	CTG ...	LMK ...	Ribo-seq	CTG	moderate	7	sORFs_org_Mouse	Intronic sORF	3T3, Brain, E14, MEF, Neutrophil, R1E, Spleen_B_cell
8724	39	ATG ...	MNW ...	Ribo-seq	ATG	moderate	6	sORFs_org_Mouse	Intronic sORF	3T3, Brain, E14, MEF, Neutrophil, R1E
1285899	87	ATT ...	IRR ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Intronic sORF	E14
8698	51	ATG ...	MKM ...	Ribo-seq	ATG	weak	6	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF, Neutrophil, R1E, Spleen_B_cell
8733	45	ATG ...	MMM ...	Ribo-seq	ATG	moderate	6	sORFs_org_Mouse	Intronic sORF	3T3, Brain, E14, MEF, Neutrophil, R1E
20620	60	TTG ...	LIL ...	Ribo-seq	TTG	moderate	6	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF, Neutrophil, R1E, Spleen_B_cell
295182	93	ATG ...	MMS ...	Ribo-seq	ATG	weak	5	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF, Neutrophil, R1E
419158	75	ATA ...	ILD ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
1287123	108	CTG ...	LGR ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	E14
91609	72	TTG ...	LDQ ...	Ribo-seq	TTG	strong	5	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF, Neutrophil, R1E
20237	84	TTG ...	LGI ...	Ribo-seq	TTG	strong	7	sORFs_org_Mouse	Intronic sORF	3T3, Brain, E14, MEF, Neutrophil, R1E
7940	42	ATG ...	MMN ...	Ribo-seq	ATG	moderate	5	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF, Neutrophil, R1E
308988	102	CTG ...	LTC ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF, Neutrophil, R1E
931674	105	ATA ...	ILT ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	Intronic sORF	E14
933372	171	TTG ...	LYD ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Intronic sORF	E14, MEF, Neutrophil

993641

ENSMUST00000132543

Eftud2-205

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
994047	39	GTG ...	VSA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	Brain
995474	186	GTG ...	VTQ ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	Brain
993640	87	CTG ...	LME ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	Brain
1036437	114	GTG ...	VKD ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	Brain

19549

ENSMUST00000173679

Eftud2-212

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
8698	51	ATG ...	MKM ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
20620	60	TTG ...	LIL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
778214	204	TTG ...	LDQ ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
1123762	33	CTG ...	LQK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
644337	57	CTG ...	LAC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1696053	36	CTG ...	LAA ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
776212	222	ATG ...	MSL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
1292562	138	ACG ...	TSA ...	Ribo-seq	ACG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
8733	45	ATG ...	MMM ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
777066	234	CTG ...	LTC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
777652	183	ATG ...	MKM ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
7940	42	ATG ...	MMN ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
91609	72	TTG ...	LDQ ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
20237	84	TTG ...	LGI ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
777195	192	TTG ...	LIL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
778108	177	ATG ...	MMM ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
777585	225	ATG ...	MMS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
775963	186	CTG ...	LMK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
8724	39	ATG ...	MNW ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
776551	216	TTG ...	LGI ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
1598294	45	CTG ...	LGS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
649598	72	CTG ...	LMR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
8107	54	CTG ...	LMK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis

1036240

ENSMUST00000173974

Eftud2-213

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
648743	39	ATG ...	MEW ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
650338	42	GTG ...	VDF ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
649598	72	CTG ...	LMR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
1036239	102	TTG ...	LRI ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
1531072	117	CTG ...	LWI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
641370	69	ATG ...	MRS ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
644337	57	CTG ...	LAC ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain

1283753

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1602352	222	ATG ...	MMS ...	Predicted	ATG		3	Samandi2017	sORF
654652	225	ATG ...	MHP ...	Predicted	ATG		1	Samandi2017	sORF
777585	225	ATG ...	MMS ...	Predicted	ATG		3	Samandi2017	sORF

ORFs

104 ORFs
11 known transcripts
201 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

449215

ATG...

MFF...

ATG

NMD
sORF
Intronic

B_cell, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

774351

GTG...

VTF...

GTG

Intronic
sORF

B_cell, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769135	ENSMUST00000141273	Eftud2-207	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1602352

222

ATG...

MMS...

ATG

Alternative
InCDS
Overlapping
sORF

MEF, Glioma, Liver,
MESC,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		1	Johnstone2016
1283753	UNKNOWN_TRANSCRIPT			Predicted		3	Samandi2017

643320

165

GTG...

VGE...

GTG

Intronic
sORF
NMD

Brain, 3T3, B_cell,
Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		4	sORFs_org_Mouse

771375

CTG...

LAA...

CTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769135	ENSMUST00000141273	Eftud2-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

642572

132

ATG...

MRT...

ATG

Intronic
sORF
NMD

B_cell, R1E, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1696053

CTG...

LAA...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
934955	ENSMUST00000131678	Eftud2-204	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

777499

132

CTG...

LLG...

CTG

Alternative
InCDS
Overlapping
sORF

R1E, B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

20620

TTG...

LIL...

TTG

Intronic
sORF
InCDS
Overlapping

MEF, Testis, B_cell,
C2C12, 3T3, Brain,
Neutrophil, R1E, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		2	sORFs_org_Mouse
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq	moderate	6	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

447026

CTG...

LTS...

CTG

NMD
sORF
Intronic
Alternative
InCDS
Overlapping

3T3, B_cell, Spleen_B_cell,
MEF, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1126952

GTG...

VYQ...

GTG

Alternative
InCDS
Overlapping
sORF

MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

457586

231

CTG...

LTC...

CTG

Alternative
InCDS
Overlapping
sORF

MEF, Neutrophil, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		4	sORFs_org_Mouse

933372

171

TTG...

LYD...

TTG

Intronic
sORF

BMDC, MEF, E14,
Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

1337951

141

ATG...

MHP...

ATG

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1291466

ATT...

IIL...

ATT

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

777715

129

CTG...

LGC...

CTG

Alternative
InCDS
Overlapping
sORF

B_cell, MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

308988

102

CTG...

LTC...

CTG

Intronic
sORF
InCDS
Overlapping

B_cell, BMDC, C2C12,
3T3, Brain, MEF,
Neutrophil, R1E, Spleen_B_cell,
E14, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		3	sORFs_org_Mouse
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		5	sORFs_org_Mouse

994047

GTG...

VSA...

GTG

NMD
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
993641	ENSMUST00000132543	Eftud2-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

8698

ATG...

MKM...

ATG

InCDS
Overlapping
sORF
Intronic

Testis, MEF, v6-5,
B_cell, Skin_tumor, 3T3,
Brain, Neutrophil, R1E,
Spleen_B_cell, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		2	sORFs_org_Mouse
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq	weak	6	sORFs_org_Mouse
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

769498

132

CTG...

LGE...

CTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769135	ENSMUST00000141273	Eftud2-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

91609

TTG...

LDQ...

TTG

Intronic
sORF
InCDS
Overlapping

MEF, Spleen_B_cell, B_cell,
Testis, 3T3, Brain,
Neutrophil, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq	strong	5	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1528421

102

ATG...

MSL...

ATG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

452157

TTG...

LFN...

TTG

NMD
sORF
InCDS
Overlapping
Intronic

B_cell, E14, MEF,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

648743

ATG...

MEW...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD

Brain, v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1036240	ENSMUST00000173974	Eftud2-213	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

296456

ATG...

MSL...

ATG

Intronic
sORF
InCDS
Overlapping

3T3, Brain, E14,
MEF, Neutrophil, R1E,
B_cell, v6-5, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq	moderate	6	sORFs_org_Mouse
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

451706

156

CTG...

LLS...

CTG

Intronic
sORF

B_cell, R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		2	sORFs_org_Mouse
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1036082

162

GTG...

VVG...

GTG

Intronic
sORF

Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
934955	ENSMUST00000131678	Eftud2-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

771030

ATG...

MTT...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic

NSC, B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

772983

GTG...

VAD...

GTG

Intronic
sORF

B_cell, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769135	ENSMUST00000141273	Eftud2-207	retained_intron	Ribo-seq		2	sORFs_org_Mouse

419158

ATA...

ILD...

ATA

Intronic
sORF

C2C12, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

650338

GTG...

VDF...

GTG

Intronic
sORF
NMD

Brain, 3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1036240	ENSMUST00000173974	Eftud2-213	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

8733

ATG...

MMM...

ATG

Intronic
sORF
InCDS
Overlapping

B_cell, Skin_tumor, 3T3,
Brain, E14, MEF,
Neutrophil, R1E, Testis,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		2	sORFs_org_Mouse
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq	moderate	6	sORFs_org_Mouse
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

995474

186

GTG...

VTQ...

GTG

NMD
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
993641	ENSMUST00000132543	Eftud2-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

778214

204

TTG...

LDQ...

TTG

Alternative
InCDS
Overlapping
sORF

MEF, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

656731

ATG...

MRS...

ATG

InCDS
Overlapping
sORF

Glioma, Liver, MEF,
MESC, 3T3, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		1	Johnstone2016
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

658769

CTG...

LQI...

CTG

InCDS
Overlapping
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

646220

ATG...

MRT...

ATG

Intronic
sORF
NMD

Brain, B_cell, R1E,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

657055

CTG...

LMR...

CTG

InCDS
Overlapping
sORF

3T3, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

8107

CTG...

LMK...

CTG

Intronic
sORF
InCDS
Overlapping

3T3, Brain, E14,
MEF, Neutrophil, R1E,
Spleen_B_cell, v6-5, B_cell,
Skin_tumor, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq	moderate	7	sORFs_org_Mouse
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		2	sORFs_org_Mouse
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse

657355

CTG...

LAC...

CTG

InCDS
Overlapping
sORF

3T3, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1123762

CTG...

LQK...

CTG

Alternative
InCDS
Overlapping
sORF

E14, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

644337

CTG...

LAC...

CTG

Alternative
InCDS
Overlapping
sORF
NMD
Intronic

E14, v6-5, 3T3,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1036240	ENSMUST00000173974	Eftud2-213	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

8724

ATG...

MNW...

ATG

Intronic
sORF
InCDS
Overlapping

3T3, Brain, E14,
MEF, Neutrophil, R1E,
Spleen_B_cell, B_cell, Skin_tumor,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq	moderate	6	sORFs_org_Mouse
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		2	sORFs_org_Mouse
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

446805

GTG...

VKT...

GTG

Intronic
sORF
NMD

B_cell, BMDC, R1E,
3T3, MEF, Brain,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

20237

TTG...

LGI...

TTG

Intronic
sORF
InCDS
Overlapping

MEF, Spleen_B_cell, B_cell,
C2C12, Testis, 3T3,
Brain, E14, Neutrophil,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		2	sORFs_org_Mouse
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq	strong	7	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

7940

ATG...

MMN...

ATG

Intronic
sORF
InCDS
Overlapping

MEF, Spleen_B_cell, Testis,
3T3, Brain, Neutrophil,
R1E, v6-5, B_cell,
Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		2	sORFs_org_Mouse

642855

126

GTG...

VLH...

GTG

NMD
sORF
Intronic

3T3, B_cell, Brain,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		3	sORFs_org_Mouse
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

649598

CTG...

LMR...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD

Brain, v6-5, 3T3,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1036240	ENSMUST00000173974	Eftud2-213	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse

776971

174

ATG...

MMN...

ATG

Alternative
InCDS
Overlapping
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

776212

222

ATG...

MSL...

ATG

Alternative
InCDS
Overlapping
sORF

MEF, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

772583

CTG...

LCF...

CTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769135	ENSMUST00000141273	Eftud2-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

931674

105

ATA...

ILT...

ATA

Intronic
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

1285899

ATT...

IRR...

ATT

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

18595

CTG...

LME...

CTG

NMD
sORF
Intronic

3T3, MEF, B_cell,
BMDC, R1E, Brain,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		3	sORFs_org_Mouse

773780

111

GTG...

VNR...

GTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769135	ENSMUST00000141273	Eftud2-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

295182

ATG...

MMS...

ATG

Intronic
sORF
InCDS
Overlapping

BMDC, MEF, Spleen_B_cell,
3T3, Brain, Neutrophil,
R1E, B_cell, C2C12,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		3	sORFs_org_Mouse
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq	weak	5	sORFs_org_Mouse
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		2	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1292562

138

ACG...

TSA...

ACG

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse

649373

114

ATG...

MTW...

ATG

NMD
sORF
Intronic
Alternative
InCDS
Overlapping

3T3, B_cell, R1E,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

777585

225

ATG...

MMS...

ATG

Alternative
InCDS
Overlapping
sORF

B_cell, Glioma, Liver,
MEF, MESC,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse Johnstone2016
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1283753	UNKNOWN_TRANSCRIPT			Predicted		3	Samandi2017

994972

150

GTG...

VDT...

GTG

Intronic
sORF

Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
934955	ENSMUST00000131678	Eftud2-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

778108

177

ATG...

MMM...

ATG

Alternative
InCDS
Overlapping
sORF

B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse

777066

234

CTG...

LTC...

CTG

Alternative
InCDS
Overlapping
sORF

MEF, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

776251

171

ATG...

MNW...

ATG

Alternative
InCDS
Overlapping
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1846027

CTG...

LLF...

CTG

InCDS
Overlapping
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

777652

183

ATG...

MKM...

ATG

Alternative
InCDS
Overlapping
sORF

MEF, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

457144

189

TTG...

LIL...

TTG

Alternative
InCDS
Overlapping
sORF

Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

641370

ATG...

MRS...

ATG

NMD
sORF
Alternative
InCDS
Overlapping
Intronic

3T3, v6-5, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1036240	ENSMUST00000173974	Eftud2-213	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

934954

GTG...

VEF...

GTG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
934955	ENSMUST00000131678	Eftud2-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

456436

213

TTG...

LGI...

TTG

Alternative
InCDS
Overlapping
sORF

Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

995038

138

CTG...

LPR...

CTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
934955	ENSMUST00000131678	Eftud2-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1696724

TTG...

LLK...

TTG

Intronic
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
934955	ENSMUST00000131678	Eftud2-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1036239

102

TTG...

LRI...

TTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1036240	ENSMUST00000173974	Eftud2-213	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

993842

159

GTG...

VGD...

GTG

Intronic
sORF

Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
934955	ENSMUST00000131678	Eftud2-204	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1598294

CTG...

LGS...

CTG

InCDS
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

994625

126

CTG...

LDE...

CTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
934955	ENSMUST00000131678	Eftud2-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

653676

129

GTG...

VVL...

GTG

Intronic
sORF
NMD

B_cell, R1E, Brain,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		2	sORFs_org_Mouse
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

993640

CTG...

LME...

CTG

NMD
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
993641	ENSMUST00000132543	Eftud2-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

777195

192

TTG...

LIL...

TTG

Alternative
InCDS
Overlapping
sORF

MEF, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1287123

108

CTG...

LGR...

CTG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292439	ENSMUST00000148209	Eftud2-210	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

1528283

CTG...

LLL...

CTG

Alternative
InCDS
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1532355

135

CTG...

LSI...

CTG

InCDS
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

645479

123

CTG...

LHE...

CTG

Intronic
sORF
NMD

B_cell, R1E, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		2	sORFs_org_Mouse
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

769947

CTG...

LIE...

CTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769135	ENSMUST00000141273	Eftud2-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

455693

183

CTG...

LMK...

CTG

Alternative
InCDS
Overlapping
sORF

Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

446292

CTG...

LFR...

CTG

InCDS
Overlapping
sORF
Intronic

E14, MEF, Brain,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

1337471

GTG...

VCA...

GTG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

775963

186

CTG...

LMK...

CTG

Alternative
InCDS
Overlapping
sORF

B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse

654652

225

ATG...

MHP...

ATG

sORF
InCDS
Overlapping

3T3, E14,
Glioma, Liver, MEF,
MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1283753	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		1	Johnstone2016

20381

GTG...

VYG...

GTG

Intronic
sORF

R1E, Testis, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		2	sORFs_org_Mouse
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1696404

GTG...

VTL...

GTG

Intronic
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
934955	ENSMUST00000131678	Eftud2-204	retained_intron	Ribo-seq		1	sORFs_org_Mouse

776551

216

TTG...

LGI...

TTG

Alternative
InCDS
Overlapping
sORF

MEF, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19549	ENSMUST00000173679	Eftud2-212	protein_coding	Ribo-seq		1	sORFs_org_Mouse
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1036437

114

GTG...

VKD...

GTG

NMD
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
993641	ENSMUST00000132543	Eftud2-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1532038

123

CTG...

LWI...

CTG

InCDS
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

457612

219

ATG...

MSL...

ATG

Alternative
InCDS
Overlapping
sORF

MEF, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
455694	ENSMUST00000107060	Eftud2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

649328

162

TTG...

LCF...

TTG

NMD
sORF

3T3, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
640725	ENSMUST00000138483	Eftud2-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

771974

GTG...

VVE...

GTG

Intronic
sORF

B_cell, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769135	ENSMUST00000141273	Eftud2-207	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1528188

CTG...

LLF...

CTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
18596	ENSMUST00000123833	Eftud2-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

20038

GTG...

VET...

GTG

Intronic
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7941	ENSMUST00000147368	Eftud2-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1697185

CTG...

LSI...

CTG

Alternative
Overlapping
sORF
Upstream

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1531072

117

CTG...

LWI...

CTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1036240	ENSMUST00000173974	Eftud2-213	retained_intron	Ribo-seq		1	sORFs_org_Mouse

769134

CTG...

LLA...

CTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769135	ENSMUST00000141273	Eftud2-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

774903

GTG...

VKT...

GTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
769135	ENSMUST00000141273	Eftud2-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

776890

CTG...

LTS...

CTG

InCDS
Overlapping
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1694901

CTG...

LCD...

CTG

InCDS
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
775964	ENSMUST00000021306	Eftud2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

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