Gene NCBI:17748 | MetamORF

Gene

ID CARD

NCBI:17748

Aliases

ENSMUSG00000031765
MGI:97171, Mt-1, MT-I
Mt1, NCBI:17748, OFF:Mt1

Chromosome

Transcripts

29 ORFs
3 known transcripts
63 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

1104437

ENSMUST00000211807

Mt1-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
919490	84	AGG ...	RAV ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Alternative Downstream sORF	E14
238962	45	CTG ...	LRL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Downstream sORF	E14, v6-5
237962	30	CTG ...	LQV ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Downstream sORF	E14, v6-5
243529	57	TTG ...	LHQ ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Downstream sORF	E14, v6-5
5423	63	ATG ...	MCP ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	Downstream sORF	Brain, E14, v6-5
237956	39	CTG ...	LQE ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Downstream sORF	Brain, E14, v6-5
1261353	39	AGG ...	RRR ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Downstream sORF	E14
5354	96	CTG ...	LLL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Downstream sORF	v6-5
5703	93	CTG ...	LLL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Downstream sORF	E14, v6-5
1104655	72	GTG ...	VGC ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative Downstream sORF	Brain, v6-5
242542	30	CTG ...	LST ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative sORF Upstream	E14, v6-5
5254	84	CTG ...	LSR ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Downstream sORF	E14, v6-5
81587	45	CTG ...	LQR ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Downstream sORF	Brain, E14
246805	63	CTG ...	LHL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Downstream sORF	E14, v6-5
5488	72	CTG ...	LLQ ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Downstream sORF	E14, v6-5
5545	51	CTG ...	LCL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Downstream sORF	E14
5587	87	CTG ...	LLS ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Downstream sORF	E14, v6-5

5255

ENSMUST00000034215

Mt1-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
237956	39	CTG ...	LQE ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, Liver
5354	96	CTG ...	LLL ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	Downstream Overlapping sORF	3T3, Brain, Liver, MEF, Skin_tumor
238962	45	CTG ...	LRL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, Liver
79576	90	GTG ...	VPR ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Brain, MEF
614736	132	CTG ...	LQE ...	Ribo-seq	CTG		15	sORFs_org_Mouse	Downstream Overlapping sORF	3T3, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
614682	150	TTG ...	LHQ ...	Ribo-seq	TTG		14	sORFs_org_Mouse	Downstream Overlapping sORF	3T3, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
5703	93	CTG ...	LLL ...	Ribo-seq	CTG	weak	6	sORFs_org_Mouse	Downstream Overlapping sORF	3T3, Brain, Liver, MEF, Skin_tumor, Testis
242542	30	CTG ...	LST ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative sORF Upstream	Brain, Liver
5423	63	ATG ...	MCP ...	Ribo-seq	ATG	weak	7	sORFs_org_Mouse Johnstone2016	Downstream Overlapping sORF	3T3, Brain, Glioma, Liver, MEF, MESC, Skin_tumor, Spleen_B_cell
81587	45	CTG ...	LQR ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Downstream Overlapping sORF	Brain, MEF
974373	69	AAG ...	KAP ...	Ribo-seq	AAG	strong	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Liver
5254	84	CTG ...	LSR ...	Ribo-seq	CTG	weak	6	sORFs_org_Mouse	Downstream Overlapping sORF	3T3, Brain, Liver, MEF, Skin_tumor, Spleen_B_cell
246805	63	CTG ...	LHL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, Liver
78937	78	GTG ...	VSA ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	MEF
241444	63	CTG ...	LSS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative sORF Upstream	3T3, MEF
5488	72	CTG ...	LLQ ...	Ribo-seq	CTG	moderate	6	sORFs_org_Mouse	Downstream Overlapping sORF	3T3, Brain, Liver, MEF, Skin_tumor, Spleen_B_cell
613777	123	CTG ...	LQV ...	Ribo-seq	CTG		14	sORFs_org_Mouse	Downstream Overlapping sORF	3T3, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E
613248	156	CTG ...	LHL ...	Ribo-seq	CTG		13	sORFs_org_Mouse	Downstream Overlapping sORF	3T3, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E
237962	30	CTG ...	LQV ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, Liver
5545	51	CTG ...	LCL ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Downstream Overlapping sORF	Brain, MEF, Skin_tumor, Spleen_B_cell
5587	87	CTG ...	LLS ...	Ribo-seq	CTG	weak	6	sORFs_org_Mouse	Downstream Overlapping sORF	3T3, Brain, Liver, MEF, Skin_tumor, Spleen_B_cell
243529	57	TTG ...	LHQ ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, Liver
615048	138	CTG ...	LRL ...	Ribo-seq	CTG		14	sORFs_org_Mouse	Downstream Overlapping sORF	3T3, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E
249571	42	GTG ...	VPD ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	MEF
919490	84	AGG ...	RAV ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Liver

78938

ENSMUST00000212291

Mt1-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
81587	45	CTG ...	LQR ...	Ribo-seq	CTG	weak	12	sORFs_org_Mouse	Downstream Overlapping sORF	BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Testis, v6-5
238962	45	CTG ...	LRL ...	Ribo-seq	CTG	weak	9	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E
5354	96	CTG ...	LLL ...	Ribo-seq	CTG	moderate	12	sORFs_org_Mouse	Downstream Overlapping sORF	BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Testis
79576	90	GTG ...	VPR ...	Ribo-seq	GTG	moderate	10	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC, Brain, E14, Liver, MEF, NSC, R1E, Testis, v6-5
919490	84	AGG ...	RAV ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC
5703	93	CTG ...	LLL ...	Ribo-seq	CTG	weak	12	sORFs_org_Mouse	Downstream Overlapping sORF	BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E
78937	78	GTG ...	VSA ...	Ribo-seq	GTG	moderate	10	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC, Brain, Liver, MEF, NSC, R1E, Testis, v6-5
5423	63	ATG ...	MCP ...	Ribo-seq	ATG	weak	13	sORFs_org_Mouse	Downstream Overlapping sORF	BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Testis
5587	87	CTG ...	LLS ...	Ribo-seq	CTG	weak	11	sORFs_org_Mouse	Downstream Overlapping sORF	BMDC, Brain, Liver, MEF, Neutrophil, NSC, R1E, Testis
237962	30	CTG ...	LQV ...	Ribo-seq	CTG	moderate	10	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E
1108382	69	CTG ...	LPP ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Downstream sORF	NSC, v6-5
246805	63	CTG ...	LHL ...	Ribo-seq	CTG	weak	8	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E
241444	63	CTG ...	LSS ...	Ribo-seq	CTG	moderate	6	sORFs_org_Mouse	Alternative sORF Upstream	BMDC, Brain, Liver, MEF, Neutrophil, NSC
5254	84	CTG ...	LSR ...	Ribo-seq	CTG	weak	12	sORFs_org_Mouse	Downstream Overlapping sORF	BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Testis
242542	30	CTG ...	LST ...	Ribo-seq	CTG	moderate	8	sORFs_org_Mouse	Alternative sORF Upstream	BMDC, Brain, Liver, MEF, Neutrophil, NSC
249571	42	GTG ...	VPD ...	Ribo-seq	GTG	moderate	5	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Brain, MEF, NSC, R1E, v6-5
5545	51	CTG ...	LCL ...	Ribo-seq	CTG	moderate	13	sORFs_org_Mouse	Downstream Overlapping sORF	BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Testis, v6-5
243529	57	TTG ...	LHQ ...	Ribo-seq	TTG	weak	7	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, R1E
1106870	33	GTG ...	VTN ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	Alternative Downstream sORF	MEF, NSC, R1E, v6-5
237956	39	CTG ...	LQE ...	Ribo-seq	CTG	weak	8	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E
5488	72	CTG ...	LLQ ...	Ribo-seq	CTG	moderate	11	sORFs_org_Mouse	Downstream Overlapping sORF	BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Testis

ORFs

29 ORFs
3 known transcripts
63 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

919490

AGG...

RAV...

AGG

Alternative
Downstream
sORF
Overlapping

E14, BMDC, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

237956

CTG...

LQE...

CTG

InCDS
Overlapping
sORF
Downstream

3T3, Brain, Liver,
E14, v6-5, BMDC,
MEF, Neutrophil, NSC,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	weak	8	sORFs_org_Mouse

81587

CTG...

LQR...

CTG

Downstream
Overlapping
sORF

BMDC, Brain, E14,
Liver, MEF, Neutrophil,
NSC, R1E, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	weak	12	sORFs_org_Mouse
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

238962

CTG...

LRL...

CTG

InCDS
Overlapping
sORF
Downstream

BMDC, Brain, E14,
Liver, MEF, Neutrophil,
NSC, R1E, v6-5,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	weak	9	sORFs_org_Mouse
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

5354

CTG...

LLL...

CTG

Downstream
Overlapping
sORF

3T3, Brain, Liver,
MEF, Skin_tumor, BMDC,
E14, Neutrophil, NSC,
R1E, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	moderate	12	sORFs_org_Mouse
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

79576

GTG...

VPR...

GTG

Alternative
Downstream
Overlapping
sORF

BMDC, Brain, E14,
Liver, MEF, NSC,
R1E, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	moderate	10	sORFs_org_Mouse
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

237962

CTG...

LQV...

CTG

Downstream
sORF
InCDS
Overlapping

E14, v6-5, BMDC,
Brain, Liver, MEF,
Neutrophil, NSC, R1E,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	moderate	10	sORFs_org_Mouse
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

614736

132

CTG...

LQE...

CTG

Downstream
Overlapping
sORF

3T3, BMDC, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq		15	sORFs_org_Mouse

5703

CTG...

LLL...

CTG

Downstream
Overlapping
sORF

BMDC, Brain, E14,
Liver, MEF, Neutrophil,
NSC, R1E, 3T3,
Skin_tumor, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	weak	12	sORFs_org_Mouse
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq	weak	6	sORFs_org_Mouse
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

78937

GTG...

VSA...

GTG

Alternative
Downstream
Overlapping
sORF

BMDC, Brain, Liver,
MEF, NSC, R1E,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	moderate	10	sORFs_org_Mouse
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

614682

150

TTG...

LHQ...

TTG

Downstream
Overlapping
sORF

3T3, BMDC, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq		14	sORFs_org_Mouse

243529

TTG...

LHQ...

TTG

Downstream
sORF
InCDS
Overlapping

E14, v6-5, Brain,
Liver, MEF, Neutrophil,
NSC, R1E, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	weak	7	sORFs_org_Mouse
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

5423

ATG...

MCP...

ATG

Downstream
sORF
Overlapping

Brain, E14, v6-5,
3T3, Glioma, Liver,
MEF, MESC, Skin_tumor,
Spleen_B_cell, BMDC, Neutrophil,
NSC, R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq	weak	7	sORFs_org_Mouse Johnstone2016
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	weak	13	sORFs_org_Mouse

242542

CTG...

LST...

CTG

Alternative
sORF
Upstream

Brain, Liver, E14,
v6-5, BMDC, MEF,
Neutrophil, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	moderate	8	sORFs_org_Mouse

974373

AAG...

KAP...

AAG

Alternative
Downstream
Overlapping
sORF

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

5587

CTG...

LLS...

CTG

Downstream
Overlapping
sORF

BMDC, Brain, Liver,
MEF, Neutrophil, NSC,
R1E, Testis, 3T3,
Skin_tumor, Spleen_B_cell, E14,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	weak	11	sORFs_org_Mouse
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq	weak	6	sORFs_org_Mouse
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse

1261353

AGG...

RRR...

AGG

Downstream
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

5254

CTG...

LSR...

CTG

Downstream
Overlapping
sORF

3T3, Brain, Liver,
MEF, Skin_tumor, Spleen_B_cell,
E14, v6-5, BMDC,
Neutrophil, NSC, R1E,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq	weak	6	sORFs_org_Mouse
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	weak	12	sORFs_org_Mouse

246805

CTG...

LHL...

CTG

InCDS
Overlapping
sORF
Downstream

3T3, Brain, Liver,
BMDC, E14, MEF,
Neutrophil, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	weak	8	sORFs_org_Mouse
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

1108382

CTG...

LPP...

CTG

Downstream
sORF

NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

241444

CTG...

LSS...

CTG

Alternative
sORF
Upstream

3T3, MEF, BMDC,
Brain, Liver, Neutrophil,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse

1104655

GTG...

VGC...

GTG

Alternative
Downstream
sORF

Brain, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

5488

CTG...

LLQ...

CTG

Downstream
Overlapping
sORF

3T3, Brain, Liver,
MEF, Skin_tumor, Spleen_B_cell,
E14, v6-5, BMDC,
Neutrophil, NSC, R1E,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	moderate	11	sORFs_org_Mouse

613777

123

CTG...

LQV...

CTG

Downstream
Overlapping
sORF

3T3, BMDC, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq		14	sORFs_org_Mouse

249571

GTG...

VPD...

GTG

Alternative
Downstream
Overlapping
sORF

Brain, MEF, NSC,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

5545

CTG...

LCL...

CTG

Downstream
Overlapping
sORF

BMDC, Brain, E14,
Liver, MEF, Neutrophil,
NSC, R1E, Testis,
v6-5, Skin_tumor, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	moderate	13	sORFs_org_Mouse
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
1104437	ENSMUST00000211807	Mt1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

613248

156

CTG...

LHL...

CTG

Downstream
Overlapping
sORF

3T3, BMDC, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq		13	sORFs_org_Mouse

1106870

GTG...

VTN...

GTG

Alternative
Downstream
sORF

MEF, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78938	ENSMUST00000212291	Mt1-203	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse

615048

138

CTG...

LRL...

CTG

Downstream
Overlapping
sORF

3T3, BMDC, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
5255	ENSMUST00000034215	Mt1-201	protein_coding	Ribo-seq		14	sORFs_org_Mouse

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