Gene NCBI:14694 | MetamORF

Gene

ID CARD

NCBI:14694

Aliases

AL033335
ENSMUSG00000020372, GB-like, Gnb2-rs1
Gnb2l1, MGI:101849, NCBI:14694
OFF:Rack1, p205, Rack1

Chromosome

Transcripts

107 ORFs
6 known transcripts
233 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

7988

ENSMUST00000139959

Rack1-205

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
22654	96	CTG ...	LSL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	BMDC
302078	54	ATG ...	MAR ...	Ribo-seq	ATG	strong	7	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, Spleen_B_cell, v6-5
298709	72	CTG ...	LMV ...	Ribo-seq	CTG	weak	8	sORFs_org_Mouse	ncRNA sORF	B_cell, E14, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
295986	39	TTG ...	LSL ...	Ribo-seq	TTG	weak	5	sORFs_org_Mouse	ncRNA sORF	B_cell, E14, MEF, Neutrophil, Spleen_B_cell
295929	63	CTG ...	LPR ...	Ribo-seq	CTG		4	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, MEF, Spleen_B_cell
446230	30	TTG ...	LSL ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	ncRNA sORF	B_cell, MEF, Neutrophil, NSC, Spleen_B_cell
419751	267	ATC ...	IAT ...	Ribo-seq	ATC		2	sORFs_org_Mouse	ncRNA sORF	BMDC, C2C12
8329	39	CTG ...	LGV ...	Ribo-seq	CTG		10	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, Skin_tumor, Spleen_B_cell, v6-5
774319	99	GTG ...	VLQ ...	Ribo-seq	GTG		6	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, NSC
21729	48	GTG ...	VPS ...	Ribo-seq	GTG	weak	5	sORFs_org_Mouse	ncRNA sORF	B_cell, E14, MEF, Neutrophil, Spleen_B_cell
8760	45	CTG ...	LTT ...	Ribo-seq	CTG	weak	10	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, Skin_tumor, Spleen_B_cell, v6-5
291449	60	CTG ...	LSY ...	Ribo-seq	CTG	weak	6	sORFs_org_Mouse	ncRNA sORF	B_cell, E14, MEF, Neutrophil, NSC, Spleen_B_cell
9097	87	GTG ...	VGT ...	Ribo-seq	GTG		9	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, NSC, Skin_tumor, Spleen_B_cell, v6-5
19331	90	GTG ...	VVA ...	Ribo-seq	GTG	strong	8	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, Spleen_B_cell
8584	111	GTG ...	VAF ...	Ribo-seq	GTG		11	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, Skin_tumor, Spleen_B_cell, v6-5
8114	72	ATG ...	MPC ...	Ribo-seq	ATG		9	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, NSC, Skin_tumor, Spleen_B_cell, v6-5
311312	36	ATG ...	MRP ...	Ribo-seq	ATG	moderate	8	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
9336	234	CTG ...	LSA ...	Ribo-seq	CTG		18	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, Skin_tumor, Spleen_B_cell, Testis, v6-5
91902	72	GTG ...	VLG ...	Ribo-seq	GTG	moderate	6	sORFs_org_Mouse	ncRNA sORF	B_cell, E14, MEF, Neutrophil, NSC, Spleen_B_cell
647137	39	CTG ...	LAI ...	Ribo-seq	CTG	moderate	6	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain, MEF, NSC, v6-5
307137	84	TTG ...	LLS ...	Ribo-seq	TTG	moderate	8	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, v6-5
305114	60	TTG ...	LPS ...	Ribo-seq	TTG	moderate	6	sORFs_org_Mouse	ncRNA sORF	B_cell, E14, MEF, Neutrophil, v6-5
8208	33	CTG ...	LPL ...	Ribo-seq	CTG		9	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, NSC, Skin_tumor, Spleen_B_cell, v6-5
313117	54	CTG ...	LPL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	R1E
9080	120	GTG ...	VLS ...	Ribo-seq	GTG		11	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, Skin_tumor, Spleen_B_cell, v6-5
23152	66	CTG ...	LEA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	R1E
7987	84	ATG ...	MGN ...	Ribo-seq	ATG		10	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, Skin_tumor, Spleen_B_cell, v6-5
23837	108	GTG ...	VGT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, R1E
419049	153	CTG ...	LRG ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	ncRNA sORF	Brain, MEF, Neutrophil, v6-5
9065	90	ATG ...	MVG ...	Ribo-seq	ATG		9	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, NSC, Skin_tumor, Spleen_B_cell, v6-5
91342	75	GTG ...	VVL ...	Ribo-seq	GTG	strong	7	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, Spleen_B_cell
975488	237	ATC ...	ILS ...	Ribo-seq	ATC		1	sORFs_org_Mouse	ncRNA sORF	MEF
303098	90	GTG ...	VML ...	Ribo-seq	GTG	weak	9	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
23375	84	ATG ...	MDP ...	Ribo-seq	ATG		2	sORFs_org_Mouse	ncRNA sORF	BMDC, R1E
419477	93	TTG ...	LCP ...	Ribo-seq	TTG		5	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, NSC, v6-5
9309	93	ATG ...	MPC ...	Ribo-seq	ATG		4	sORFs_org_Mouse	ncRNA sORF	BMDC, Brain, R1E, v6-5
419247	33	CTG ...	LRR ...	Ribo-seq	CTG	weak	6	sORFs_org_Mouse	ncRNA sORF	B_cell, E14, MEF, Neutrophil, NSC, Spleen_B_cell
21467	87	GTG ...	VAA ...	Ribo-seq	GTG	strong	8	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, Spleen_B_cell
772909	72	CTG ...	LRC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	B_cell
305777	195	CTG ...	LTR ...	Ribo-seq	CTG	moderate	8	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, Neutrophil, Spleen_B_cell, v6-5
995792	246	CTG ...	LWD ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, NSC
769114	78	CTG ...	LAL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	B_cell
90877	99	ATG ...	MRV ...	Ribo-seq	ATG		8	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, NSC, Spleen_B_cell, v6-5
449758	63	CTG ...	LFA ...	Ribo-seq	CTG	moderate	6	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, E14, MEF, NSC, Spleen_B_cell
645059	42	TTG ...	LLA ...	Ribo-seq	TTG	weak	5	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain, MEF, NSC
8856	117	TTG ...	LSV ...	Ribo-seq	TTG		11	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, Skin_tumor, Spleen_B_cell, v6-5
303663	102	ATG ...	MGV ...	Ribo-seq	ATG		7	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, NSC, Spleen_B_cell, v6-5
293060	69	ATG ...	MVS ...	Ribo-seq	ATG	moderate	8	sORFs_org_Mouse	ncRNA sORF	B_cell, E14, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
307389	87	ATG ...	MLL ...	Ribo-seq	ATG	moderate	8	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, v6-5
22696	72	GTG ...	VLL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	BMDC, v6-5
19726	72	GTG ...	VSA ...	Ribo-seq	GTG		8	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, NSC, Spleen_B_cell, v6-5

19332

ENSMUST00000136703

Rack1-203

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
931543	39	ACG ...	TER ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Intronic sORF	E14
21467	87	GTG ...	VAA ...	Ribo-seq	GTG	strong	5	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, E14, Liver, R1E
293060	69	ATG ...	MVS ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, Liver
9080	120	GTG ...	VLS ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, Liver
1841991	66	CTG ...	LSA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
305114	60	TTG ...	LPS ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Intronic sORF	BMDC, E14, Liver
419633	99	ATC ...	IAT ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Intronic sORF	E14
419049	153	CTG ...	LRG ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	BMDC, E14, Liver
307137	84	TTG ...	LLS ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, E14, Liver
7987	84	ATG ...	MGN ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, E14, Liver, R1E
307389	87	ATG ...	MLL ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, Liver
446230	30	TTG ...	LSL ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Liver
1287663	117	ATC ...	ISS ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Intronic sORF	E14
1290232	84	ATT ...	IVS ...	Ribo-seq	ATT	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
21729	48	GTG ...	VPS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	Liver, R1E
291449	60	CTG ...	LSY ...	Ribo-seq	CTG	weak	5	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, E14, Liver, R1E
419231	207	ATC ...	IMW ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Intronic sORF	MEF
311312	36	ATG ...	MRP ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, E14
1284448	126	AAG ...	KDV ...	Ribo-seq	AAG	strong	1	sORFs_org_Mouse	Intronic sORF	E14
8584	111	GTG ...	VAF ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Intronic sORF	BMDC, Liver
305777	195	CTG ...	LTR ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, E14, Liver
19331	90	GTG ...	VVA ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, Liver, R1E, Testis
1284841	72	ACG ...	TLR ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Intronic sORF	E14
8856	117	TTG ...	LSV ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, E14, Liver
303098	90	GTG ...	VML ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, E14, Liver
419361	48	ATT ...	ICR ...	Ribo-seq	ATT	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
8760	45	CTG ...	LTT ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	BMDC, E14, Liver
418886	36	ATA ...	ILW ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	Intronic sORF	E14
298709	72	CTG ...	LMV ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, E14, Liver
91902	72	GTG ...	VLG ...	Ribo-seq	GTG	moderate	5	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, E14, Liver, R1E
91342	75	GTG ...	VVL ...	Ribo-seq	GTG	strong	4	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, Liver, R1E
295986	39	TTG ...	LSL ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
1285449	216	AAG ...	KTI ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Intronic sORF	E14

301320

ENSMUST00000136849

Rack1-204

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
449758	63	CTG ...	LFA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Brain
1079391	45	TTG ...	LVC ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	ncRNA sORF	MEF
994910	168	TTG ...	LKQ ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	Brain
1295162	165	AAG ...	KII ...	Ribo-seq	AAG		1	sORFs_org_Mouse	ncRNA sORF	E14
993785	39	TTG ...	LVR ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	ncRNA sORF	Brain
659515	90	TTG ...	LAW ...	Ribo-seq	TTG		9	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, BMDC, Brain, E14, MEF, NSC
301319	36	GTG ...	VRV ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	ncRNA sORF	Brain
1294550	132	ATC ...	IST ...	Ribo-seq	ATC		1	sORFs_org_Mouse	ncRNA sORF	E14
659599	174	TTG ...	LEG ...	Ribo-seq	TTG		13	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, BMDC, Brain, E14, MEF, NSC, R1E, v6-5
994147	195	TTG ...	LEG ...	Ribo-seq	TTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, MEF
1078895	36	CTG ...	LFL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	MEF
655600	147	TTG ...	LKQ ...	Ribo-seq	TTG		12	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, BMDC, Brain, E14, MEF, NSC, R1E, v6-5

295930

ENSMUST00000142269

Rack1-206

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
8760	45	CTG ...	LTT ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	3T3, MEF, R1E
418842	183	TTG ...	LCF ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	C2C12
1695125	69	GTG ...	VTR ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	MEF, R1E
8208	33	CTG ...	LPL ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Intronic sORF	3T3, C2C12, MEF, R1E
419583	141	GTG ...	VSC ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	C2C12, MEF
303663	102	ATG ...	MGV ...	Ribo-seq	ATG	strong	4	sORFs_org_Mouse	Intronic sORF	3T3, Liver, MEF, R1E
303098	90	GTG ...	VML ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	Intronic sORF	3T3, MEF, R1E
91342	75	GTG ...	VVL ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Intronic sORF	3T3, MEF
419477	93	TTG ...	LCP ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	Intronic sORF	3T3, C2C12, Liver, MEF, R1E
774319	99	GTG ...	VLQ ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	MEF, R1E
307389	87	ATG ...	MLL ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, MEF, R1E
8856	117	TTG ...	LSV ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, MEF, R1E
9065	90	ATG ...	MVG ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, MEF, R1E
419247	33	CTG ...	LRR ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, C2C12
419306	48	ATC ...	INC ...	Ribo-seq	ATC	weak	1	sORFs_org_Mouse	Intronic sORF	C2C12
305114	60	TTG ...	LPS ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, MEF, R1E
769114	78	CTG ...	LAL ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	MEF, R1E
302078	54	ATG ...	MAR ...	Ribo-seq	ATG	strong	5	sORFs_org_Mouse	Intronic sORF	3T3, Brain, Liver, MEF, R1E
311312	36	ATG ...	MRP ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, MEF, R1E
419282	144	CTG ...	LQA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	C2C12, MEF
295929	63	CTG ...	LPR ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF, R1E
8584	111	GTG ...	VAF ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Intronic sORF	3T3, MEF, R1E
21467	87	GTG ...	VAA ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Intronic sORF	3T3, C2C12, MEF
8329	39	CTG ...	LGV ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	Intronic sORF	3T3, MEF, R1E
9080	120	GTG ...	VLS ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, MEF, R1E
419228	69	CTG ...	LRL ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	C2C12, R1E
91902	72	GTG ...	VLG ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, MEF
19726	72	GTG ...	VSA ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	Intronic sORF	3T3, Liver, MEF, R1E
446230	30	TTG ...	LSL ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, MEF, R1E
305777	195	CTG ...	LTR ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, C2C12, MEF, R1E
298709	72	CTG ...	LMV ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	3T3, MEF, R1E
419407	48	CTG ...	LRM ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	C2C12, MEF, R1E
419049	153	CTG ...	LRG ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Intronic sORF	3T3, C2C12, MEF, R1E
291449	60	CTG ...	LSY ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	3T3, C2C12, MEF
8114	72	ATG ...	MPC ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF, R1E
419361	48	ATT ...	ICR ...	Ribo-seq	ATT	moderate	1	sORFs_org_Mouse	Intronic sORF	C2C12
295986	39	TTG ...	LSL ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, C2C12
19331	90	GTG ...	VVA ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Intronic sORF	3T3, MEF
419633	99	ATC ...	IAT ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	Intronic sORF	C2C12
772909	72	CTG ...	LRC ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	MEF, R1E
1695785	87	CTG ...	LGR ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	MEF, R1E
7987	84	ATG ...	MGN ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, C2C12, MEF
419231	207	ATC ...	IMW ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	Intronic sORF	C2C12
21729	48	GTG ...	VPS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, C2C12
9097	87	GTG ...	VGT ...	Ribo-seq	GTG	strong	4	sORFs_org_Mouse	Intronic sORF	3T3, Brain, MEF, R1E
418886	36	ATA ...	ILW ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	Intronic sORF	C2C12
307137	84	TTG ...	LLS ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, MEF, R1E
1695131	42	ATG ...	MGQ ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
90877	99	ATG ...	MRV ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	Intronic sORF	3T3, Liver, MEF, R1E
293060	69	ATG ...	MVS ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, MEF, R1E

9240

ENSMUST00000020640

Rack1-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
22654	96	CTG ...	LSL ...	Ribo-seq	CTG		19	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, Spleen_B_cell, Testis, v6-5
9291	81	CTG ...	LGS ...	Ribo-seq	CTG		14	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, MEF, NSC, Skin_tumor, Spleen_B_cell, v6-5
91342	75	GTG ...	VVL ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC, MEF, Testis
19726	72	GTG ...	VSA ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Liver, Testis
305114	60	TTG ...	LPS ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Liver, MEF, Spleen_B_cell
23375	84	ATG ...	MDP ...	Ribo-seq	ATG		18	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Glioma, Liver, MEF, MESC, Neutrophil, NSC, Spleen_B_cell, Testis, v6-5
319460	96	GTG ...	VSA ...	Ribo-seq	GTG		15	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
298709	72	CTG ...	LMV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver, MEF
23837	108	GTG ...	VGT ...	Ribo-seq	GTG		8	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, Brain, E14, MEF, NSC, Spleen_B_cell, Testis
419477	93	TTG ...	LCP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
418886	36	ATA ...	ILW ...	Ribo-seq	ATA		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF
22696	72	GTG ...	VLL ...	Ribo-seq	GTG		12	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, MEF, Neutrophil, Spleen_B_cell, Testis
295986	39	TTG ...	LSL ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC
936733	114	ATT ...	IQN ...	Ribo-seq	ATT		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
303098	90	GTG ...	VML ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver, MEF
291449	60	CTG ...	LSY ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Liver
315783	123	TTG ...	LLS ...	Ribo-seq	TTG		18	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
9097	87	GTG ...	VGT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
21729	48	GTG ...	VPS ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC, MEF, Testis
21467	87	GTG ...	VAA ...	Ribo-seq	GTG	strong	4	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC, MEF, Testis
307137	84	TTG ...	LLS ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver, MEF, Spleen_B_cell
23152	66	CTG ...	LEA ...	Ribo-seq	CTG		16	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, Liver, MEF, Neutrophil, Spleen_B_cell, Testis, v6-5
318126	129	GTG ...	VML ...	Ribo-seq	GTG		18	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
307389	87	ATG ...	MLL ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Liver, MEF, Spleen_B_cell
8114	72	ATG ...	MPC ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Testis
8760	45	CTG ...	LTT ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, Liver, Testis
9065	90	ATG ...	MVG ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Brain, Testis
446230	30	TTG ...	LSL ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
317288	126	ATG ...	MLL ...	Ribo-seq	ATG		20	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Glioma, Liver, MEF, MESC, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
317203	111	ATG ...	MVG ...	Ribo-seq	ATG		15	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Glioma, Liver, MEF, MESC, NSC, R1E, Spleen_B_cell, v6-5
931543	39	ACG ...	TER ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
9309	93	ATG ...	MPC ...	Ribo-seq	ATG		11	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, Brain, E14, MEF, NSC, Skin_tumor, Spleen_B_cell, Testis
936758	57	AGG ...	RMA ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
293060	69	ATG ...	MVS ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Liver, MEF
8208	33	CTG ...	LPL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Testis
7987	84	ATG ...	MGN ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
938070	78	ACG ...	TER ...	Ribo-seq	ACG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF
319100	111	CTG ...	LMV ...	Ribo-seq	CTG		18	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
24213	123	ATG ...	MRV ...	Ribo-seq	ATG		19	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Glioma, Liver, MEF, MESC, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
932449	90	ATT ...	IQN ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
303663	102	ATG ...	MGV ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
319179	108	ATG ...	MVS ...	Ribo-seq	ATG		18	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
9239	99	ATG ...	MGN ...	Ribo-seq	ATG		22	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, C2C12, E14, Glioma, Liver, MEF, MESC, Neutrophil, NSC, R1E, Skin_tumor, Spleen_B_cell, v6-5
313117	54	CTG ...	LPL ...	Ribo-seq	CTG		10	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, Brain, E14, MEF, Neutrophil, Spleen_B_cell
9602	102	CTG ...	LGR ...	Ribo-seq	CTG		17	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, Brain, E14, MEF, Neutrophil, NSC, R1E, Skin_tumor, Spleen_B_cell, v6-5
312996	99	TTG ...	LPS ...	Ribo-seq	TTG		17	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
311312	36	ATG ...	MRP ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	BMDC, Glioma, Liver, MEF, MESC
419808	156	ATA ...	ILW ...	Ribo-seq	ATA		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, C2C12, E14, MEF
938184	123	AAG ...	KKL ...	Ribo-seq	AAG		2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, E14
931715	78	AAG ...	KKL ...	Ribo-seq	AAG		1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
935050	48	AGG ...	RLC ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
932726	54	AAG ...	KAI ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
19331	90	GTG ...	VVA ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF
419306	48	ATC ...	INC ...	Ribo-seq	ATC	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC
91902	72	GTG ...	VLG ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF, Testis
90877	99	ATG ...	MRV ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Liver, Testis
934700	84	ATC ...	IRC ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC

975304

ENSMUST00000125166

Rack1-202

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
9065	90	ATG ...	MVG ...	Ribo-seq	ATG		5	sORFs_org_Mouse	ncRNA sORF	BMDC, Brain, E14, MEF, Neutrophil
935050	48	AGG ...	RLC ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	ncRNA sORF	E14
419583	141	GTG ...	VSC ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	Brain
1078895	36	CTG ...	LFL ...	Ribo-seq	CTG		4	sORFs_org_Mouse	ncRNA sORF	BMDC, MEF, Neutrophil, R1E
1285074	147	AGG ...	RQA ...	Ribo-seq	AGG		1	sORFs_org_Mouse	ncRNA sORF	E14
418842	183	TTG ...	LCF ...	Ribo-seq	TTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, MEF
449758	63	CTG ...	LFA ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	E14, Neutrophil
23837	108	GTG ...	VGT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	BMDC, v6-5
1079391	45	TTG ...	LVC ...	Ribo-seq	TTG		2	sORFs_org_Mouse	ncRNA sORF	MEF, Neutrophil
419477	93	TTG ...	LCP ...	Ribo-seq	TTG		4	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, Neutrophil
1291675	195	ATC ...	IIN ...	Ribo-seq	ATC		1	sORFs_org_Mouse	ncRNA sORF	E14
932449	90	ATT ...	IQN ...	Ribo-seq	ATT		2	sORFs_org_Mouse	ncRNA sORF	E14, MEF
295929	63	CTG ...	LPR ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	BMDC, MEF, Neutrophil
22654	96	CTG ...	LSL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	R1E
975365	225	AAG ...	KHL ...	Ribo-seq	AAG		1	sORFs_org_Mouse	ncRNA sORF	MEF
302078	54	ATG ...	MAR ...	Ribo-seq	ATG	strong	4	sORFs_org_Mouse	ncRNA sORF	BMDC, E14, MEF, Neutrophil
303663	102	ATG ...	MGV ...	Ribo-seq	ATG		4	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, Neutrophil
769114	78	CTG ...	LAL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	E14
9097	87	GTG ...	VGT ...	Ribo-seq	GTG		5	sORFs_org_Mouse	ncRNA sORF	BMDC, Brain, MEF, Neutrophil
19726	72	GTG ...	VSA ...	Ribo-seq	GTG		3	sORFs_org_Mouse	ncRNA sORF	BMDC, MEF, Neutrophil
22696	72	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	R1E
8208	33	CTG ...	LPL ...	Ribo-seq	CTG		4	sORFs_org_Mouse	ncRNA sORF	BMDC, E14, MEF, Neutrophil
774319	99	GTG ...	VLQ ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, E14
772909	72	CTG ...	LRC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	E14
23152	66	CTG ...	LEA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	BMDC
313117	54	CTG ...	LPL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	BMDC, v6-5
995792	246	CTG ...	LWD ...	Ribo-seq	CTG		4	sORFs_org_Mouse	ncRNA sORF	BMDC, Brain, E14, Neutrophil
90877	99	ATG ...	MRV ...	Ribo-seq	ATG		4	sORFs_org_Mouse	ncRNA sORF	BMDC, E14, MEF, Neutrophil
931715	78	AAG ...	KKL ...	Ribo-seq	AAG		1	sORFs_org_Mouse	ncRNA sORF	E14
8114	72	ATG ...	MPC ...	Ribo-seq	ATG		5	sORFs_org_Mouse	ncRNA sORF	BMDC, Brain, E14, MEF, Neutrophil

929949

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
9239	99	ATG ...	MGN ...	Predicted	ATG		1	Samandi2017	sORF
317203	111	ATG ...	MVG ...	Predicted	ATG		1	Samandi2017	sORF
317288	126	ATG ...	MLL ...	Predicted	ATG		1	Samandi2017	sORF
24213	123	ATG ...	MRV ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

107 ORFs
6 known transcripts
233 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

22654

CTG...

LSL...

CTG

ncRNA
sORF
Alternative
InCDS
Overlapping

BMDC, 3T3, B_cell,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
Spleen_B_cell, Testis, v6-5,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		19	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

931543

ACG...

TER...

ACG

Intronic
sORF
Alternative
InCDS
Overlapping

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

302078

ATG...

MAR...

ATG

ncRNA
sORF
Intronic

B_cell, Brain, E14,
MEF, Spleen_B_cell, v6-5,
3T3, Liver, R1E,
BMDC, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	strong	7	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	strong	5	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq	strong	4	sORFs_org_Mouse

449758

CTG...

LFA...

CTG

ncRNA
sORF

Brain, E14, Neutrophil,
3T3, B_cell, MEF,
NSC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
301320	ENSMUST00000136849	Rack1-204	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	moderate	6	sORFs_org_Mouse

8760

CTG...

LTT...

CTG

Intronic
sORF
ncRNA
Alternative
InCDS
Overlapping

3T3, MEF, R1E,
B_cell, Brain, E14,
Neutrophil, NSC, Skin_tumor,
Spleen_B_cell, v6-5, BMDC,
Liver, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	weak	10	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse

418842

183

TTG...

LCF...

TTG

Intronic
sORF
ncRNA

C2C12, Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

9065

ATG...

MVG...

ATG

ncRNA
sORF
InCDS
Overlapping
Intronic

BMDC, Brain, E14,
MEF, Neutrophil, Testis,
3T3, R1E, B_cell,
NSC, Skin_tumor, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		5	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

298709

CTG...

LMV...

CTG

ncRNA
sORF
Alternative
InCDS
Overlapping
Intronic

B_cell, E14, MEF,
Neutrophil, NSC, Spleen_B_cell,
v6-5, Liver, BMDC,
Brain, 3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	weak	8	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		4	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse

9291

CTG...

LGS...

CTG

InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, MEF,
NSC, Skin_tumor, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		14	sORFs_org_Mouse

1695125

GTG...

VTR...

GTG

Intronic
sORF

MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

21467

GTG...

VAA...

GTG

Intronic
sORF
Alternative
Overlapping
Upstream
ncRNA

BMDC, Brain, E14,
Liver, R1E, MEF,
Testis, 3T3, C2C12,
B_cell, Neutrophil, NSC,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq	strong	5	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	strong	8	sORFs_org_Mouse

935050

AGG...

RLC...

AGG

ncRNA
sORF
InCDS
Overlapping

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1079391

TTG...

LVC...

TTG

ncRNA
sORF

MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
301320	ENSMUST00000136849	Rack1-204	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

91342

GTG...

VVL...

GTG

Alternative
Overlapping
sORF
Upstream
Intronic
ncRNA

BMDC, MEF, Testis,
3T3, B_cell, Brain,
E14, Neutrophil, NSC,
Spleen_B_cell, Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	strong	7	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq	strong	4	sORFs_org_Mouse

19726

GTG...

VSA...

GTG

Alternative
InCDS
Overlapping
sORF
Intronic
ncRNA

Brain, Liver, Testis,
3T3, MEF, R1E,
BMDC, Neutrophil, B_cell,
E14, NSC, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		8	sORFs_org_Mouse

305114

TTG...

LPS...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic
ncRNA

Brain, Liver, MEF,
Spleen_B_cell, BMDC, E14,
3T3, R1E, B_cell,
Neutrophil, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		3	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	moderate	6	sORFs_org_Mouse

8208

CTG...

LPL...

CTG

Intronic
sORF
ncRNA
InCDS
Overlapping

3T3, C2C12, MEF,
R1E, B_cell, Brain,
E14, NSC, Skin_tumor,
Spleen_B_cell, v6-5, Testis,
BMDC, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		9	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		4	sORFs_org_Mouse

295986

TTG...

LSL...

TTG

ncRNA
sORF
Alternative
Overlapping
Upstream
Intronic

B_cell, E14, MEF,
Neutrophil, Spleen_B_cell, BMDC,
3T3, C2C12, Brain,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	weak	5	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

419583

141

GTG...

VSC...

GTG

Intronic
sORF
ncRNA

C2C12, MEF, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1078895

CTG...

LFL...

CTG

ncRNA
sORF

BMDC, MEF, Neutrophil,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		4	sORFs_org_Mouse
301320	ENSMUST00000136849	Rack1-204	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

994910

168

TTG...

LKQ...

TTG

ncRNA
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
301320	ENSMUST00000136849	Rack1-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1285074

147

AGG...

RQA...

AGG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

295929

CTG...

LPR...

CTG

ncRNA
sORF
Intronic

B_cell, Brain, MEF,
Spleen_B_cell, BMDC, Neutrophil,
3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		4	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq		4	sORFs_org_Mouse

446230

TTG...

LSL...

TTG

ncRNA
sORF
Alternative
InCDS
Overlapping
Intronic

B_cell, MEF, Neutrophil,
NSC, Spleen_B_cell, Liver,
3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	moderate	5	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

23375

ATG...

MDP...

ATG

Alternative
InCDS
Overlapping
sORF
ncRNA

3T3, B_cell, BMDC,
Brain, E14, Glioma,
Liver, MEF, MESC,
Neutrophil, NSC, Spleen_B_cell,
Testis, v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		18	sORFs_org_Mouse Johnstone2016
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

303663

102

ATG...

MGV...

ATG

Intronic
sORF
ncRNA
Alternative
InCDS
Overlapping

3T3, Liver, MEF,
R1E, Brain, E14,
Neutrophil, B_cell, NSC,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	strong	4	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		4	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		7	sORFs_org_Mouse

319460

GTG...

VSA...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		15	sORFs_org_Mouse

23837

108

GTG...

VGT...

GTG

InCDS
Overlapping
sORF
ncRNA

3T3, B_cell, Brain,
E14, MEF, NSC,
Spleen_B_cell, Testis, BMDC,
v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		8	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

9239

ATG...

MGN...

ATG

sORF
Alternative
InCDS
Overlapping

3T3, B_cell,
BMDC, Brain, C2C12,
E14, Glioma, Liver,
MEF, MESC, Neutrophil,
NSC, R1E, Skin_tumor,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
929949	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		22	sORFs_org_Mouse Johnstone2016

419751

267

ATC...

IAT...

ATC

ncRNA
sORF

BMDC, C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

419477

TTG...

LCP...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic
ncRNA

BMDC, 3T3, C2C12,
Liver, MEF, R1E,
Brain, E14, Neutrophil,
B_cell, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		4	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		5	sORFs_org_Mouse

418886

ATA...

ILW...

ATA

Alternative
InCDS
Overlapping
sORF
Intronic

BMDC, MEF, E14,
C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1295162

165

AAG...

KII...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
301320	ENSMUST00000136849	Rack1-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

8329

CTG...

LGV...

CTG

ncRNA
sORF
Intronic

B_cell, Brain, E14,
MEF, Neutrophil, NSC,
Skin_tumor, Spleen_B_cell, v6-5,
3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		10	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse

22696

GTG...

VLL...

GTG

Alternative
InCDS
Overlapping
sORF
ncRNA

3T3, B_cell, Brain,
E14, MEF, Neutrophil,
Spleen_B_cell, Testis, R1E,
BMDC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		12	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

293060

ATG...

MVS...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping
ncRNA

BMDC, Brain, Liver,
MEF, B_cell, E14,
Neutrophil, NSC, Spleen_B_cell,
v6-5, 3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		3	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	moderate	8	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

9080

120

GTG...

VLS...

GTG

Intronic
sORF
ncRNA

BMDC, Brain, Liver,
B_cell, E14, MEF,
Neutrophil, NSC, Skin_tumor,
Spleen_B_cell, v6-5, 3T3,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		11	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

774319

GTG...

VLQ...

GTG

ncRNA
sORF
Intronic

B_cell, Brain, E14,
MEF, NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		6	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

936733

114

ATT...

IQN...

ATT

Alternative
InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

303098

GTG...

VML...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping
ncRNA

3T3, MEF, R1E,
Liver, BMDC, Brain,
E14, B_cell, Neutrophil,
NSC, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		4	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	weak	9	sORFs_org_Mouse

1841991

CTG...

LSA...

CTG

Intronic
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

21729

GTG...

VPS...

GTG

ncRNA
sORF
Alternative
Overlapping
Upstream
Intronic

B_cell, E14, MEF,
Neutrophil, Spleen_B_cell, BMDC,
Testis, Liver, R1E,
3T3, C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	weak	5	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse

291449

CTG...

LSY...

CTG

Alternative
Overlapping
sORF
Upstream
ncRNA
Intronic

Liver, B_cell, E14,
MEF, Neutrophil, NSC,
Spleen_B_cell, BMDC, Brain,
R1E, 3T3, C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	weak	6	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq	weak	5	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse

315783

123

TTG...

LLS...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		18	sORFs_org_Mouse

993785

TTG...

LVR...

TTG

ncRNA
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
301320	ENSMUST00000136849	Rack1-204	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse

9097

GTG...

VGT...

GTG

InCDS
Overlapping
sORF
ncRNA
Intronic

Testis, B_cell, Brain,
E14, MEF, NSC,
Skin_tumor, Spleen_B_cell, v6-5,
BMDC, Neutrophil, 3T3,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		9	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		5	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	strong	4	sORFs_org_Mouse

659515

TTG...

LAW...

TTG

ncRNA
sORF

3T3, B_cell, BMDC,
Brain, E14, MEF,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
301320	ENSMUST00000136849	Rack1-204	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

317203

111

ATG...

MVG...

ATG

sORF
InCDS
Overlapping

3T3, B_cell,
BMDC, Brain, E14,
Glioma, Liver, MEF,
MESC, NSC, R1E,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
929949	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		15	sORFs_org_Mouse Johnstone2016

19331

GTG...

VVA...

GTG

ncRNA
sORF
Intronic
Alternative
Overlapping
Upstream

B_cell, Brain, E14,
MEF, Neutrophil, NSC,
Spleen_B_cell, BMDC, Liver,
R1E, Testis, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	strong	8	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		5	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

307137

TTG...

LLS...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic
ncRNA

Liver, MEF, Spleen_B_cell,
BMDC, Brain, E14,
B_cell, Neutrophil, NSC,
v6-5, 3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		4	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	moderate	8	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

23152

CTG...

LEA...

CTG

Alternative
InCDS
Overlapping
sORF
ncRNA

3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, Spleen_B_cell, Testis,
v6-5, R1E, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		16	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

318126

129

GTG...

VML...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		18	sORFs_org_Mouse

1291675

195

ATC...

IIN...

ATC

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

8584

111

GTG...

VAF...

GTG

ncRNA
sORF
Intronic

B_cell, Brain, E14,
MEF, Neutrophil, NSC,
Skin_tumor, Spleen_B_cell, v6-5,
BMDC, Liver, 3T3,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		11	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse

307389

ATG...

MLL...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic
ncRNA

BMDC, Liver, MEF,
Spleen_B_cell, 3T3, R1E,
Brain, B_cell, E14,
Neutrophil, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		3	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	moderate	8	sORFs_org_Mouse

8114

ATG...

MPC...

ATG

InCDS
Overlapping
sORF
ncRNA
Intronic

Testis, B_cell, Brain,
E14, MEF, NSC,
Skin_tumor, Spleen_B_cell, v6-5,
3T3, R1E, BMDC,
Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		9	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		5	sORFs_org_Mouse

311312

ATG...

MRP...

ATG

ncRNA
sORF
Intronic
Alternative
InCDS
Overlapping

Brain, E14, MEF,
Neutrophil, NSC, Spleen_B_cell,
v6-5, 3T3, B_cell,
R1E, BMDC, Glioma,
Liver, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	moderate	8	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse Johnstone2016

419633

ATC...

IAT...

ATC

Intronic
sORF

E14, C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

9336

234

CTG...

LSA...

CTG

ncRNA
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
Skin_tumor, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		18	sORFs_org_Mouse

419049

153

CTG...

LRG...

CTG

Intronic
sORF
ncRNA

BMDC, E14, Liver,
Brain, MEF, Neutrophil,
v6-5, 3T3, C2C12,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		3	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	moderate	5	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse

932449

ATT...

IQN...

ATT

ncRNA
sORF
Alternative
InCDS
Overlapping

E14, MEF, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

91902

GTG...

VLG...

GTG

ncRNA
sORF
Intronic
Alternative
Overlapping
Upstream

B_cell, E14, MEF,
Neutrophil, NSC, Spleen_B_cell,
BMDC, Brain, Liver,
R1E, 3T3, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	moderate	6	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

7987

ATG...

MGN...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping
ncRNA

BMDC, Brain, E14,
Liver, R1E, MEF,
B_cell, Neutrophil, NSC,
Skin_tumor, Spleen_B_cell, v6-5,
3T3, C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		6	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		10	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

317288

126

ATG...

MLL...

ATG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Glioma,
Liver, MEF, MESC,
Neutrophil, NSC, R1E,
Spleen_B_cell, v6-5,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		20	sORFs_org_Mouse Johnstone2016
929949	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

301319

GTG...

VRV...

GTG

ncRNA
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
301320	ENSMUST00000136849	Rack1-204	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse

8856

117

TTG...

LSV...

TTG

Intronic
sORF
ncRNA

3T3, MEF, R1E,
BMDC, Brain, E14,
Liver, B_cell, Neutrophil,
NSC, Skin_tumor, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		11	sORFs_org_Mouse

419247

CTG...

LRR...

CTG

Intronic
sORF
ncRNA

3T3, C2C12, B_cell,
E14, MEF, Neutrophil,
NSC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	weak	6	sORFs_org_Mouse

419306

ATC...

INC...

ATC

Intronic
sORF
Alternative
Overlapping
Upstream

C2C12, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1287663

117

ATC...

ISS...

ATC

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

9309

ATG...

MPC...

ATG

InCDS
Overlapping
sORF
ncRNA

3T3, B_cell, Brain,
E14, MEF, NSC,
Skin_tumor, Spleen_B_cell, Testis,
BMDC, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		11	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		4	sORFs_org_Mouse

1290232

ATT...

IVS...

ATT

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

647137

CTG...

LAI...

CTG

ncRNA
sORF

3T3, B_cell, Brain,
MEF, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	moderate	6	sORFs_org_Mouse

769114

CTG...

LAL...

CTG

Intronic
sORF
ncRNA

MEF, R1E, E14,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

419231

207

ATC...

IMW...

ATC

Intronic
sORF

MEF, C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

936758

AGG...

RMA...

AGG

Alternative
InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

313117

CTG...

LPL...

CTG

ncRNA
sORF
InCDS
Overlapping

R1E, 3T3, B_cell,
Brain, E14, MEF,
Neutrophil, Spleen_B_cell, BMDC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		10	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

1284448

126

AAG...

KDV...

AAG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

419282

144

CTG...

LQA...

CTG

Intronic
sORF

C2C12, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq		2	sORFs_org_Mouse

938070

ACG...

TER...

ACG

Alternative
InCDS
Overlapping
sORF

BMDC, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

305777

195

CTG...

LTR...

CTG

Intronic
sORF
ncRNA

BMDC, Brain, E14,
Liver, 3T3, B_cell,
C2C12, MEF, R1E,
Neutrophil, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		4	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	moderate	8	sORFs_org_Mouse

319100

111

CTG...

LMV...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		18	sORFs_org_Mouse

1284841

ACG...

TLR...

ACG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

24213

123

ATG...

MRV...

ATG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Glioma,
Liver, MEF, MESC,
Neutrophil, NSC, R1E,
Spleen_B_cell, Testis, v6-5,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		19	sORFs_org_Mouse Johnstone2016
929949	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

975365

225

AAG...

KHL...

AAG

ncRNA
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1294550

132

ATC...

IST...

ATC

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
301320	ENSMUST00000136849	Rack1-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

975488

237

ATC...

ILS...

ATC

ncRNA
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

419361

ATT...

ICR...

ATT

Intronic
sORF

E14, C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

419228

CTG...

LRL...

CTG

Intronic
sORF

C2C12, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

319179

108

ATG...

MVS...

ATG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		18	sORFs_org_Mouse

659599

174

TTG...

LEG...

TTG

ncRNA
sORF

3T3, B_cell, BMDC,
Brain, E14, MEF,
NSC, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
301320	ENSMUST00000136849	Rack1-204	processed_transcript	Ribo-seq		13	sORFs_org_Mouse

9602

102

CTG...

LGR...

CTG

InCDS
Overlapping
sORF

3T3, B_cell, Brain,
E14, MEF, Neutrophil,
NSC, R1E, Skin_tumor,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		17	sORFs_org_Mouse

312996

TTG...

LPS...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		17	sORFs_org_Mouse

994147

195

TTG...

LEG...

TTG

ncRNA
sORF

Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
301320	ENSMUST00000136849	Rack1-204	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

419407

CTG...

LRM...

CTG

Intronic
sORF

C2C12, MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse

419808

156

ATA...

ILW...

ATA

Alternative
InCDS
Overlapping
sORF

BMDC, C2C12, E14,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

938184

123

AAG...

KKL...

AAG

InCDS
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

931715

AAG...

KKL...

AAG

InCDS
Overlapping
sORF
ncRNA

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

772909

CTG...

LRC...

CTG

ncRNA
sORF
Intronic

B_cell, E14, MEF,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

932726

AAG...

KAI...

AAG

InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

995792

246

CTG...

LWD...

CTG

ncRNA
sORF

Brain, NSC, BMDC,
E14, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		4	sORFs_org_Mouse

1695785

CTG...

LGR...

CTG

Intronic
sORF

MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

90877

ATG...

MRV...

ATG

ncRNA
sORF
Alternative
InCDS
Overlapping
Intronic

B_cell, Brain, E14,
MEF, NSC, Spleen_B_cell,
v6-5, Liver, Testis,
3T3, R1E, BMDC,
Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq		8	sORFs_org_Mouse
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
975304	ENSMUST00000125166	Rack1-202	processed_transcript	Ribo-seq		4	sORFs_org_Mouse

645059

TTG...

LLA...

TTG

ncRNA
sORF

3T3, B_cell, Brain,
MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
7988	ENSMUST00000139959	Rack1-205	processed_transcript	Ribo-seq	weak	5	sORFs_org_Mouse

1695131

ATG...

MGQ...

ATG

Intronic
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
295930	ENSMUST00000142269	Rack1-206	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

655600

147

TTG...

LKQ...

TTG

ncRNA
sORF

3T3, B_cell, BMDC,
Brain, E14, MEF,
NSC, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
301320	ENSMUST00000136849	Rack1-204	processed_transcript	Ribo-seq		12	sORFs_org_Mouse

1285449

216

AAG...

KTI...

AAG

Intronic
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
19332	ENSMUST00000136703	Rack1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

934700

ATC...

IRC...

ATC

Alternative
Overlapping
sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
9240	ENSMUST00000020640	Rack1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

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