Metam
ORF

Logo

Gene

Gene

ID CARD

ID

NCBI:13690

Aliases

DAP-5
E130105L11Rik, Eif4g2, ENSMUSG00000005610
MGI:109207, Nat1, Natm1
NCBI:13690, OFF:Eif4g2, p97

Chromosome

7

Transcripts

182 ORFs
14 known transcripts
283 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

1097915 33

GTG ...

VEM ...

Ribo-seq
GTG

strong

1 sORFs_org_Mouse
    sORF
BMDC
77887 123

TTG ...

LAS ...

Ribo-seq
TTG

8 sORFs_org_Mouse
    sORF
BMDC, Brain, E14,
Liver, MEF, Spleen_B_cell,
Testis
1259920 216

ATA ...

ISV ...

Ribo-seq
ATA

1 sORFs_org_Mouse
    sORF
E14
74338 63

ATG ...

MHQ ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    sORF
Brain, Testis
1254546 138

ATC ...

IPS ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    sORF
E14
426251 84

TTG ...

LSS ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    sORF
BMDC, Spleen_B_cell
77755 219

ATG ...

MIS ...

Ribo-seq
ATG

7 sORFs_org_Mouse
    sORF
BMDC, Brain, Liver,
MEF, Spleen_B_cell, Testis
230455 108

ATG ...

MLS ...

Ribo-seq
ATG

4 sORFs_org_Mouse
    sORF
Brain, E14, Liver,
R1E
77427 174

GTG ...

VHL ...

Ribo-seq
GTG

5 sORFs_org_Mouse
    sORF
BMDC, Brain, MEF,
R1E, Spleen_B_cell
212240 36

ATG ...

MSA ...

Ribo-seq
ATG

moderate

2 sORFs_org_Mouse
    sORF
BMDC, Brain
224828 144

GTG ...

VKI ...

Ribo-seq
GTG

4 sORFs_org_Mouse
    sORF
BMDC, E14, MEF,
R1E
1257224 30

ATC ...

IST ...

Ribo-seq
ATC

weak

1 sORFs_org_Mouse
    sORF
E14
230711 63

ATG ...

MAQ ...

Ribo-seq
ATG

3 sORFs_org_Mouse
    sORF
E14, Liver, R1E
77277 168

TTG ...

LLR ...

Ribo-seq
TTG

6 sORFs_org_Mouse
    sORF
BMDC, Brain, Liver,
MEF, Spleen_B_cell, Testis
234741 66

TTG ...

LMA ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    sORF
Brain, Liver, R1E
74767 153

ATG ...

MIS ...

Ribo-seq
ATG

5 sORFs_org_Mouse
    sORF
BMDC, Brain, Liver,
MEF, Testis
78126 114

TTG ...

LIL ...

Ribo-seq
TTG

6 sORFs_org_Mouse
    sORF
BMDC, Brain, Liver,
R1E, Spleen_B_cell, Testis
229957 144

GTG ...

VHS ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    sORF
Brain, E14
228276 48

TTG ...

LIL ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    sORF
BMDC, Brain
77482 240

TTG ...

LPP ...

Ribo-seq
TTG

4 sORFs_org_Mouse
    sORF
Brain, MEF, Spleen_B_cell,
Testis
1070200 282

GTG ...

VRT ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    sORF
MEF
78007 255

ATG ...

MNL ...

Ribo-seq
ATG

9 sORFs_org_Mouse
    sORF
3T3, BMDC, Brain,
E14, Liver, MEF,
Spleen_B_cell, Testis, v6-5
214049 51

TTG ...

LMA ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    sORF
Brain
913516 39

AAG ...

KIW ...

Ribo-seq
AAG

weak

1 sORFs_org_Mouse
    sORF
E14
1259084 45

AGG ...

RNC ...

Ribo-seq
AGG

1 sORFs_org_Mouse
    sORF
E14
422974 66

CTG ...

LLL ...

Ribo-seq
CTG

weak

2 sORFs_org_Mouse
    sORF
Liver, Spleen_B_cell
222065 42

ATG ...

MTS ...

Ribo-seq
ATG

moderate

2 sORFs_org_Mouse
    sORF
Liver, Spleen_B_cell
227527 69

ATG ...

MTT ...

Ribo-seq
ATG

moderate

2 sORFs_org_Mouse
    sORF
Brain, Spleen_B_cell
73153 90

CTG ...

LHE ...

Ribo-seq
CTG

weak

4 sORFs_org_Mouse
    sORF
BMDC, MEF, R1E,
Spleen_B_cell
1250415 117

AGG ...

RNR ...

Ribo-seq
AGG

1 sORFs_org_Mouse
    sORF
E14
78072 192

CTG ...

LRR ...

Ribo-seq
CTG

6 sORFs_org_Mouse
    sORF
BMDC, Liver, MEF,
Spleen_B_cell, Testis
216182 39

ATG ...

MKK ...

Ribo-seq
ATG

weak

1 sORFs_org_Mouse
    sORF
Spleen_B_cell
4471 102

TTG ...

LLR ...

Ribo-seq
TTG

5 sORFs_org_Mouse
    sORF
BMDC, Brain, MEF,
Skin_tumor, Testis
213042 57

TTG ...

LAS ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    sORF
BMDC, Brain, E14
1258341 204

ATC ...

IPS ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    sORF
E14
1256173 150

ATA ...

ISV ...

Ribo-seq
ATA

1 sORFs_org_Mouse
    sORF
E14
594807 51

TTG ...

LIR ...

Ribo-seq
TTG

moderate

1 sORFs_org_Mouse
    sORF
MEF
75411 51

ATG ...

MEV ...

Ribo-seq
ATG

5 sORFs_org_Mouse
    sORF
BMDC, MEF, R1E,
Spleen_B_cell
596479 48

CTG ...

LKS ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    sORF
BMDC
77811 210

GTG ...

VKI ...

Ribo-seq
GTG

6 sORFs_org_Mouse
    sORF
BMDC, Liver, MEF,
R1E, Spleen_B_cell, Testis
1259970 48

AGG ...

RVN ...

Ribo-seq
AGG

1 sORFs_org_Mouse
    sORF
E14
879146 54

GTG ...

VAA ...

Ribo-seq
GTG

3 sORFs_org_Mouse
    sORF
Liver, MEF
593050 93

TTG ...

LKI ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    sORF
BMDC
915995 120

ATA ...

IAR ...

Ribo-seq
ATA

1 sORFs_org_Mouse
    sORF
E14
73966 66

TTG ...

LEN ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    sORF
BMDC, Brain, Testis
75386 45

GTG ...

VAA ...

Ribo-seq
GTG

6 sORFs_org_Mouse
    sORF
BMDC, Brain, MEF,
R1E, Spleen_B_cell
588998 39

TTG ...

LTS ...

Ribo-seq
TTG

moderate

1 sORFs_org_Mouse
    sORF
BMDC
77539 204

GTG ...

VLL ...

Ribo-seq
GTG

5 sORFs_org_Mouse
    sORF
BMDC, Brain, MEF,
R1E, Spleen_B_cell
227035 48

GTG ...

VPL ...

Ribo-seq
GTG

moderate

4 sORFs_org_Mouse
    sORF
BMDC, MEF, R1E,
Spleen_B_cell
1258620 183

AGG ...

RNR ...

Ribo-seq
AGG

1 sORFs_org_Mouse
    sORF
E14
916772 111

ATC ...

ILF ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    sORF
E14
78315 132

TTG ...

LEN ...

Ribo-seq
TTG

6 sORFs_org_Mouse
    sORF
BMDC, Brain, Liver,
MEF, Spleen_B_cell, Testis
1575901 90

AAG ...

KIL ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    sORF
MEF
3697 126

CTG ...

LRR ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    sORF
BMDC, Liver, MEF
1254923 39

AGG ...

RNC ...

Ribo-seq
AGG

1 sORFs_org_Mouse
    sORF
E14
1259734 132

AAG ...

KSQ ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    sORF
E14
879781 60

ATG ...

MEV ...

Ribo-seq
ATG

3 sORFs_org_Mouse
    sORF
Liver, MEF
78333 102

ATG ...

MNL ...

Ribo-seq
ATG

7 sORFs_org_Mouse
    sORF
BMDC, Brain, Liver,
R1E, Spleen_B_cell, Testis
415853 33

AAG ...

KND ...

Ribo-seq
AAG

moderate

1 sORFs_org_Mouse
    sORF
MEF
1254652 72

ATT ...

IGF ...

Ribo-seq
ATT

strong

1 sORFs_org_Mouse
    sORF
E14
227152 93

ATG ...

MLS ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    sORF
Brain, R1E
78335 150

CTG ...

LLA ...

Ribo-seq
CTG

5 sORFs_org_Mouse
    sORF
BMDC, Brain, MEF,
R1E, Spleen_B_cell
840426 39

TTG ...

LKT ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    sORF
BMDC
76210 36

ATG ...

MNL ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    sORF
BMDC, Testis
77907 147

CTG ...

LAT ...

Ribo-seq
CTG

4 sORFs_org_Mouse
    sORF
BMDC, MEF, R1E,
Spleen_B_cell
77166 78

ATG ...

MHQ ...

Ribo-seq
ATG

5 sORFs_org_Mouse
    sORF
Brain, E14, Liver,
R1E, Testis
77007 249

TTG ...

LKT ...

Ribo-seq
TTG

7 sORFs_org_Mouse
    sORF
BMDC, Brain, Liver,
MEF, Spleen_B_cell, Testis,
v6-5
4180 42

CTG ...

LSD ...

Ribo-seq
CTG

weak

3 sORFs_org_Mouse
    sORF
Brain, R1E, Spleen_B_cell
594545 42

ATG ...

MKQ ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    sORF
E14
416494 159

ATC ...

IPR ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    sORF
MEF
72134 ENSMUST00000162415 Eif4g2-213 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

589357 144

TTG ...

LVL ...

Ribo-seq
TTG

strong

5 sORFs_org_Mouse
    sORF
3T3, B_cell, E14,
NSC, v6-5
915633 219

ACG ...

TPQ ...

Ribo-seq
ACG

moderate

1 sORFs_org_Mouse
    sORF
BMDC
224047 42

ATG ...

MDQ ...

Ribo-seq
ATG

strong

11 sORFs_org_Mouse
    sORF
3T3, B_cell, BMDC,
E14, Liver, MEF,
Neutrophil, NSC
915995 120

ATA ...

IAR ...

Ribo-seq
ATA

1 sORFs_org_Mouse
    sORF
BMDC
594545 42

ATG ...

MKQ ...

Ribo-seq
ATG

moderate

3 sORFs_org_Mouse
    sORF
B_cell, Brain, E14
77482 240

TTG ...

LPP ...

Ribo-seq
TTG

8 sORFs_org_Mouse
    sORF
E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5
1672288 30

CTG ...

LRW ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    sORF
MEF
913637 90

ATC ...

IVQ ...

Ribo-seq
ATC

strong

1 sORFs_org_Mouse
    sORF
BMDC
78315 132

TTG ...

LEN ...

Ribo-seq
TTG

13 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5
77755 219

ATG ...

MIS ...

Ribo-seq
ATG

12 sORFs_org_Mouse
    sORF
B_cell, BMDC, Brain,
E14, MEF, Neutrophil,
NSC, R1E, v6-5
594456 138

CTG ...

LVQ ...

Ribo-seq
CTG

strong

6 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, NSC, v6-5
78072 192

CTG ...

LRR ...

Ribo-seq
CTG

13 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, MEF, Neutrophil,
NSC, R1E, v6-5
843228 90

CTG ...

LLK ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    sORF
B_cell
227527 69

ATG ...

MTT ...

Ribo-seq
ATG

moderate

11 sORFs_org_Mouse
    sORF
3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
v6-5
594924 60

GTG ...

VPC ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    sORF
3T3, E14
227152 93

ATG ...

MLS ...

Ribo-seq
ATG

10 sORFs_org_Mouse
    sORF
B_cell, BMDC, Brain,
E14, Liver, MEF,
Neutrophil, NSC, v6-5
1070200 282

GTG ...

VRT ...

Ribo-seq
GTG

6 sORFs_org_Mouse
    sORF
E14, Liver, MEF,
Neutrophil, NSC, v6-5
593387 48

TTG ...

LFT ...

Ribo-seq
TTG

weak

4 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14
77887 123

TTG ...

LAS ...

Ribo-seq
TTG

12 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5
912332 120

AGG ...

RID ...

Ribo-seq
AGG

weak

1 sORFs_org_Mouse
    sORF
BMDC
226920 48

ATG ...

MAQ ...

Ribo-seq
ATG

9 sORFs_org_Mouse
    sORF
B_cell, BMDC, Brain,
E14, Liver, MEF,
Neutrophil, v6-5
1097393 48

ATG ...

MYW ...

Ribo-seq
ATG

weak

4 sORFs_org_Mouse
    sORF
Brain, MEF, NSC,
v6-5
78333 102

ATG ...

MNL ...

Ribo-seq
ATG

12 sORFs_org_Mouse
    sORF
3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
v6-5
840426 39

TTG ...

LKT ...

Ribo-seq
TTG

8 sORFs_org_Mouse
    sORF
B_cell, Brain, E14,
Liver, MEF, Neutrophil,
NSC
415853 33

AAG ...

KND ...

Ribo-seq
AAG

moderate

1 sORFs_org_Mouse
    sORF
BMDC
915736 87

ATT ...

ILR ...

Ribo-seq
ATT

1 sORFs_org_Mouse
    sORF
BMDC
77427 174

GTG ...

VHL ...

Ribo-seq
GTG

11 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, v6-5
596479 48

CTG ...

LKS ...

Ribo-seq
CTG

weak

9 sORFs_org_Mouse
    sORF
3T3, B_cell, BMDC,
Brain, E14, MEF,
NSC, v6-5
214049 51

TTG ...

LMA ...

Ribo-seq
TTG

7 sORFs_org_Mouse
    sORF
B_cell, E14, Liver,
MEF, Neutrophil, v6-5
913319 42

AGG ...

RAK ...

Ribo-seq
AGG

moderate

1 sORFs_org_Mouse
    sORF
BMDC
216182 39

ATG ...

MKK ...

Ribo-seq
ATG

weak

11 sORFs_org_Mouse
    sORF
B_cell, BMDC, Brain,
E14, MEF, Neutrophil,
NSC, v6-5
912604 33

ATT ...

IRE ...

Ribo-seq
ATT

1 sORFs_org_Mouse
    sORF
BMDC
600008 180

TTG ...

LLI ...

Ribo-seq
TTG

7 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Neutrophil, NSC,
v6-5
590252 33

GTG ...

VAA ...

Ribo-seq
GTG

moderate

12 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, v6-5
844236 135

CTG ...

LRL ...

Ribo-seq
CTG

moderate

7 sORFs_org_Mouse
    sORF
B_cell, BMDC, Brain,
E14, Liver, MEF,
v6-5
228276 48

TTG ...

LIL ...

Ribo-seq
TTG

8 sORFs_org_Mouse
    sORF
B_cell, Brain, E14,
Liver, MEF, Neutrophil,
NSC, v6-5
916445 105

ATA ...

ITR ...

Ribo-seq
ATA

2 sORFs_org_Mouse
    sORF
BMDC, E14
913802 36

AAG ...

KQG ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    sORF
BMDC
914268 39

AGG ...

RIE ...

Ribo-seq
AGG

moderate

1 sORFs_org_Mouse
    sORF
BMDC
913480 168

ACG ...

TSS ...

Ribo-seq
ACG

1 sORFs_org_Mouse
    sORF
BMDC
915423 45

ATC ...

ILF ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    sORF
BMDC
598555 135

ATG ...

MWI ...

Ribo-seq
ATG

5 sORFs_org_Mouse
    sORF
3T3, Brain, E14,
NSC, v6-5
592772 150

GTG ...

VEL ...

Ribo-seq
GTG

strong

7 sORFs_org_Mouse
    sORF
3T3, B_cell, BMDC,
Brain, E14, NSC,
v6-5
1068716 42

TTG ...

LIE ...

Ribo-seq
TTG

weak

3 sORFs_org_Mouse
    sORF
MEF, Neutrophil, NSC
77539 204

GTG ...

VLL ...

Ribo-seq
GTG

11 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, v6-5
224828 144

GTG ...

VKI ...

Ribo-seq
GTG

11 sORFs_org_Mouse
    sORF
B_cell, Brain, E14,
Liver, MEF, Neutrophil,
NSC, v6-5
913516 39

AAG ...

KIW ...

Ribo-seq
AAG

weak

1 sORFs_org_Mouse
    sORF
BMDC
75386 45

GTG ...

VAA ...

Ribo-seq
GTG

strong

13 sORFs_org_Mouse
    sORF
3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
v6-5
916772 111

ATC ...

ILF ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    sORF
BMDC
422974 66

CTG ...

LLL ...

Ribo-seq
CTG

weak

7 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
MEF, NSC, v6-5
589533 93

TTG ...

LFS ...

Ribo-seq
TTG

weak

7 sORFs_org_Mouse
    sORF
3T3, B_cell, BMDC,
Brain, E14, MEF,
v6-5
77166 78

ATG ...

MHQ ...

Ribo-seq
ATG

12 sORFs_org_Mouse
    sORF
3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
v6-5
599629 141

ATG ...

MIM ...

Ribo-seq
ATG

6 sORFs_org_Mouse
    sORF
BMDC, Brain, E14,
MEF, NSC, v6-5
912030 30

AGG ...

RWR ...

Ribo-seq
AGG

moderate

1 sORFs_org_Mouse
    sORF
BMDC
588998 39

TTG ...

LTS ...

Ribo-seq
TTG

moderate

8 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, MEF, NSC,
v6-5
591692 78

ATG ...

MWI ...

Ribo-seq
ATG

3 sORFs_org_Mouse
    sORF
3T3, Brain, E14
599798 108

ATG ...

MLC ...

Ribo-seq
ATG

6 sORFs_org_Mouse
    sORF
B_cell, Brain, E14,
MEF, NSC, v6-5
76210 36

ATG ...

MNL ...

Ribo-seq
ATG

8 sORFs_org_Mouse
    sORF
B_cell, BMDC, Brain,
E14, MEF, Neutrophil,
NSC, v6-5
912036 105

ATA ...

IAR ...

Ribo-seq
ATA

1 sORFs_org_Mouse
    sORF
BMDC
595943 51

ATG ...

MLC ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    sORF
E14
911880 42

ACG ...

TTG ...

Ribo-seq
ACG

weak

1 sORFs_org_Mouse
    sORF
BMDC
222065 42

ATG ...

MTS ...

Ribo-seq
ATG

moderate

9 sORFs_org_Mouse
    sORF
3T3, B_cell, BMDC,
Brain, MEF, Neutrophil,
NSC, v6-5
213042 57

TTG ...

LAS ...

Ribo-seq
TTG

7 sORFs_org_Mouse
    sORF
B_cell, Brain, E14,
MEF, Neutrophil, NSC,
v6-5
4471 102

TTG ...

LLR ...

Ribo-seq
TTG

10 sORFs_org_Mouse
    sORF
B_cell, Brain, E14,
Liver, MEF, Neutrophil,
NSC, v6-5
74338 63

ATG ...

MHQ ...

Ribo-seq
ATG

9 sORFs_org_Mouse
    sORF
B_cell, BMDC, Brain,
E14, MEF, Neutrophil,
NSC, v6-5
598560 189

TTG ...

LGD ...

Ribo-seq
TTG

7 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Neutrophil, NSC,
v6-5
73966 66

TTG ...

LEN ...

Ribo-seq
TTG

8 sORFs_org_Mouse
    sORF
B_cell, Brain, E14,
Liver, MEF, Neutrophil,
NSC, v6-5
78126 114

TTG ...

LIL ...

Ribo-seq
TTG

12 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, v6-5
73153 90

CTG ...

LHE ...

Ribo-seq
CTG

weak

11 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, v6-5
913185 81

ATC ...

ISS ...

Ribo-seq
ATC

weak

1 sORFs_org_Mouse
    sORF
BMDC
915940 93

AGG ...

RDS ...

Ribo-seq
AGG

2 sORFs_org_Mouse
    sORF
BMDC, E14
74767 153

ATG ...

MIS ...

Ribo-seq
ATG

10 sORFs_org_Mouse
    sORF
B_cell, BMDC, Brain,
E14, MEF, Neutrophil,
NSC, v6-5
911628 36

AGG ...

RKG ...

Ribo-seq
AGG

moderate

1 sORFs_org_Mouse
    sORF
BMDC
227035 48

GTG ...

VPL ...

Ribo-seq
GTG

moderate

12 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, v6-5
217048 54

CTG ...

LPR ...

Ribo-seq
CTG

moderate

10 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, MEF, Neutrophil,
NSC, v6-5
594807 51

TTG ...

LIR ...

Ribo-seq
TTG

moderate

7 sORFs_org_Mouse
    sORF
3T3, B_cell, E14,
MEF, Neutrophil, v6-5
230711 63

ATG ...

MAQ ...

Ribo-seq
ATG

13 sORFs_org_Mouse
    sORF
3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
v6-5
229184 36

ATG ...

MTW ...

Ribo-seq
ATG

weak

3 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain
916485 60

AGG ...

RIC ...

Ribo-seq
AGG

2 sORFs_org_Mouse
    sORF
BMDC, E14
215424 48

TTG ...

LTM ...

Ribo-seq
TTG

weak

12 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, v6-5
592947 30

CTG ...

LLQ ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    sORF
3T3, E14
912127 99

ATT ...

ILL ...

Ribo-seq
ATT

1 sORFs_org_Mouse
    sORF
BMDC
230455 108

ATG ...

MLS ...

Ribo-seq
ATG

12 sORFs_org_Mouse
    sORF
3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
v6-5
1097085 45

GTG ...

VAP ...

Ribo-seq
GTG

strong

3 sORFs_org_Mouse
    sORF
Brain, E14, v6-5
598374 168

TTG ...

LDK ...

Ribo-seq
TTG

8 sORFs_org_Mouse
    sORF
3T3, B_cell, BMDC,
Brain, E14, Neutrophil,
NSC, v6-5
77007 249

TTG ...

LKT ...

Ribo-seq
TTG

12 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E
78007 255

ATG ...

MNL ...

Ribo-seq
ATG

11 sORFs_org_Mouse
    sORF
B_cell, Brain, E14,
Liver, MEF, Neutrophil,
NSC, R1E
911953 108

ATT ...

INI ...

Ribo-seq
ATT

1 sORFs_org_Mouse
    sORF
BMDC
916873 72

AAG ...

KDS ...

Ribo-seq
AAG

2 sORFs_org_Mouse
    sORF
BMDC, E14
426251 84

TTG ...

LSS ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    sORF
3T3
416494 159

ATC ...

IPR ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    sORF
BMDC
75411 51

ATG ...

MEV ...

Ribo-seq
ATG

moderate

15 sORFs_org_Mouse
    sORF
3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
v6-5
916737 201

ATA ...

IGT ...

Ribo-seq
ATA

1 sORFs_org_Mouse
    sORF
BMDC
588972 60

GTG ...

VVN ...

Ribo-seq
GTG

7 sORFs_org_Mouse
    sORF
3T3, BMDC, E14,
MEF, NSC, v6-5
916774 99

AGG ...

RCT ...

Ribo-seq
AGG

1 sORFs_org_Mouse
    sORF
BMDC
1097236 63

ATG ...

MGG ...

Ribo-seq
ATG

strong

2 sORFs_org_Mouse
    sORF
NSC, v6-5
1070207 87

GTG ...

VAA ...

Ribo-seq
GTG

5 sORFs_org_Mouse
    sORF
Brain, E14, MEF,
Neutrophil
78335 150

CTG ...

LLA ...

Ribo-seq
CTG

13 sORFs_org_Mouse
    sORF
3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
v6-5
229957 144

GTG ...

VHS ...

Ribo-seq
GTG

10 sORFs_org_Mouse
    sORF
3T3, B_cell, BMDC,
Brain, E14, MEF,
Neutrophil, NSC, v6-5
211699 93

TTG ...

LVS ...

Ribo-seq
TTG

strong

10 sORFs_org_Mouse
    sORF
3T3, B_cell, BMDC,
Brain, E14, MEF,
NSC, v6-5
234741 66

TTG ...

LMA ...

Ribo-seq
TTG

11 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, v6-5
72133 96

TTG ...

LGF ...

Ribo-seq
TTG

16 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
Liver, MEF, Neutrophil,
NSC, R1E, Spleen_B_cell,
Testis, v6-5
212240 36

ATG ...

MSA ...

Ribo-seq
ATG

moderate

9 sORFs_org_Mouse
    sORF
B_cell, BMDC, Brain,
E14, Liver, MEF,
NSC, v6-5
1068594 84

GTG ...

VHL ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    sORF
Neutrophil
3697 126

CTG ...

LRR ...

Ribo-seq
CTG

10 sORFs_org_Mouse
    sORF
B_cell, Brain, E14,
MEF, Neutrophil, NSC,
v6-5
77811 210

GTG ...

VKI ...

Ribo-seq
GTG

13 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, v6-5
911689 63

ATC ...

IHP ...

Ribo-seq
ATC

weak

1 sORFs_org_Mouse
    sORF
BMDC
916657 66

GTG ...

VKA ...

Ribo-seq
GTG

4 sORFs_org_Mouse
    sORF
BMDC, Brain, E14,
MEF
913734 42

AGG ...

RSV ...

Ribo-seq
AGG

weak

1 sORFs_org_Mouse
    sORF
BMDC
916016 75

ATA ...

ICR ...

Ribo-seq
ATA

1 sORFs_org_Mouse
    sORF
BMDC
4180 42

CTG ...

LSD ...

Ribo-seq
CTG

weak

10 sORFs_org_Mouse
    sORF
B_cell, BMDC, Brain,
E14, Liver, MEF,
NSC, v6-5
1068281 33

GTG ...

VMK ...

Ribo-seq
GTG

moderate

2 sORFs_org_Mouse
    sORF
MEF, Neutrophil
915483 60

ATA ...

ISL ...

Ribo-seq
ATA

weak

1 sORFs_org_Mouse
    sORF
BMDC
1097915 33

GTG ...

VEM ...

Ribo-seq
GTG

strong

4 sORFs_org_Mouse
    sORF
MEF, NSC, v6-5
593286 84

ATG ...

MIM ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    sORF
Brain, E14
77907 147

CTG ...

LAT ...

Ribo-seq
CTG

12 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, v6-5
602398 117

GTG ...

VPC ...

Ribo-seq
GTG

5 sORFs_org_Mouse
    sORF
3T3, Brain, E14,
NSC, v6-5
915926 39

AAG ...

KSF ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    sORF
BMDC
601356 177

CTG ...

LIC ...

Ribo-seq
CTG

7 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Neutrophil, NSC,
v6-5
1099223 69

ATG ...

MAM ...

Ribo-seq
ATG

moderate

2 sORFs_org_Mouse
    sORF
NSC, v6-5
842986 45

ATG ...

MNL ...

Ribo-seq
ATG

8 sORFs_org_Mouse
    sORF
B_cell, Brain, E14,
Liver, MEF, Neutrophil,
NSC
916647 123

AGG ...

RSV ...

Ribo-seq
AGG

1 sORFs_org_Mouse
    sORF
BMDC
840860 87

CTG ...

LKK ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    sORF
B_cell
593050 93

TTG ...

LKI ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    sORF
B_cell, Brain, Liver
1791218 30

ATG ...

MKI ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    sORF
MEF
77277 168

TTG ...

LLR ...

Ribo-seq
TTG

14 sORFs_org_Mouse
    sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5
1258179 33

AAG ...

KDS ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    sORF
E14
3888 ENSMUST00000161736 Eif4g2-210 retained_intron
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

224047 42

ATG ...

MDQ ...

Ribo-seq
ATG

strong

1 sORFs_org_Mouse
    Intronic
    sORF
Brain
4075 48

GTG ...

VGP ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Intronic
    sORF
Skin_tumor
73050 192

GTG ...

VFI ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    Intronic
    sORF
Brain, Testis
1026738 102

TTG ...

LRE ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Intronic
    sORF
Brain
74091 147

CTG ...

LEG ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Intronic
    sORF
Testis
3887 78

TTG ...

LEC ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    Intronic
    sORF
Brain, Skin_tumor, Testis
3904 123

TTG ...

LEK ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    Intronic
    sORF
Brain, Skin_tumor, Testis
4180 42

CTG ...

LSD ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    Intronic
    sORF
Skin_tumor
423209 ENSMUST00000159465 Eif4g2-202 retained_intron
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

1689446 66

TTG ...

LCL ...

Ribo-seq
TTG

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
MEF
1689699 60

TTG ...

LQK ...

Ribo-seq
TTG

weak

1 sORFs_org_Mouse
    Intronic
    sORF
MEF
535073 102

CTG ...

LDP ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Intronic
    sORF
Spleen_B_cell
533737 159

CTG ...

LSF ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Intronic
    sORF
Spleen_B_cell
594807 51

TTG ...

LIR ...

Ribo-seq
TTG

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
MEF
423769 174

TTG ...

LEG ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Intronic
    sORF
Spleen_B_cell
423908 183

TTG ...

LEI ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Intronic
    sORF
Spleen_B_cell
423319 132

TTG ...

LEK ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Intronic
    sORF
Spleen_B_cell
423208 117

TTG ...

LKQ ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Intronic
    sORF
Spleen_B_cell
73154 ENSMUST00000160132 Eif4g2-203 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

77427 174

GTG ...

VHL ...

Ribo-seq
GTG

4 sORFs_org_Mouse
    sORF
E14, Liver, MEF,
Testis
75411 51

ATG ...

MEV ...

Ribo-seq
ATG

moderate

2 sORFs_org_Mouse
    sORF
Liver, Testis
415853 33

AAG ...

KND ...

Ribo-seq
AAG

moderate

1 sORFs_org_Mouse
    sORF
C2C12
75386 45

GTG ...

VAA ...

Ribo-seq
GTG

strong

1 sORFs_org_Mouse
    sORF
Testis
915736 87

ATT ...

ILR ...

Ribo-seq
ATT

1 sORFs_org_Mouse
    sORF
E14
78335 150

CTG ...

LLA ...

Ribo-seq
CTG

3 sORFs_org_Mouse
    sORF
E14, Liver, Testis
590252 33

GTG ...

VAA ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    sORF
MEF
415862 108

ACG ...

TLR ...

Ribo-seq
ACG

moderate

2 sORFs_org_Mouse
    sORF
C2C12, E14
227527 69

ATG ...

MTT ...

Ribo-seq
ATG

moderate

2 sORFs_org_Mouse
    sORF
C2C12, MEF
77907 147

CTG ...

LAT ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    sORF
Liver, Testis
212240 36

ATG ...

MSA ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    sORF
Liver
73153 90

CTG ...

LHE ...

Ribo-seq
CTG

weak

5 sORFs_org_Mouse
    sORF
C2C12, E14, Liver,
MEF, Testis
77539 204

GTG ...

VLL ...

Ribo-seq
GTG

3 sORFs_org_Mouse
    sORF
Liver, MEF, Testis
416494 159

ATC ...

IPR ...

Ribo-seq
ATC

2 sORFs_org_Mouse
    sORF
C2C12, E14
3698 ENSMUST00000161682 Eif4g2-209 retained_intron
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

73966 66

TTG ...

LEN ...

Ribo-seq
TTG

moderate

2 sORFs_org_Mouse
    Intronic
    sORF
Brain, Liver
228276 48

TTG ...

LIL ...

Ribo-seq
TTG

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
Brain
212240 36

ATG ...

MSA ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
Brain
74338 63

ATG ...

MHQ ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    Intronic
    sORF
Liver
877319 105

CTG ...

LRL ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Intronic
    sORF
Liver
1026143 216

GTG ...

VRT ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    Intronic
    sORF
Brain
213042 57

TTG ...

LAS ...

Ribo-seq
TTG

strong

1 sORFs_org_Mouse
    Intronic
    sORF
Liver
224828 144

GTG ...

VKI ...

Ribo-seq
GTG

moderate

2 sORFs_org_Mouse
    Intronic
    sORF
Brain, Liver
533299 159

GTG ...

VDK ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    Intronic
    sORF
Liver, Spleen_B_cell
877196 123

CTG ...

LYA ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Intronic
    sORF
Liver
227152 93

ATG ...

MLS ...

Ribo-seq
ATG

2 sORFs_org_Mouse
    Intronic
    sORF
3T3, Liver
531485 63

GTG ...

VGV ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    Intronic
    sORF
Brain, Spleen_B_cell
4471 102

TTG ...

LLR ...

Ribo-seq
TTG

weak

4 sORFs_org_Mouse
    Intronic
    sORF
3T3, Brain, Liver,
R1E
214049 51

TTG ...

LMA ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Intronic
    sORF
3T3
3697 126

CTG ...

LRR ...

Ribo-seq
CTG

weak

4 sORFs_org_Mouse
    Intronic
    sORF
Brain, Liver, R1E,
Skin_tumor
74767 153

ATG ...

MIS ...

Ribo-seq
ATG

weak

4 sORFs_org_Mouse
    Intronic
    sORF
3T3, Brain, Liver,
R1E
596859 174

TTG ...

LPP ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    Intronic
    sORF
3T3, Brain, R1E
988218 ENSMUST00000160966 Eif4g2-205 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

1068267 168

GTG ...

VFS ...

Ribo-seq
GTG

3 sORFs_org_Mouse
    sORF
MEF, Neutrophil
593050 93

TTG ...

LKI ...

Ribo-seq
TTG

6 sORFs_org_Mouse
    sORF
E14, MEF, Neutrophil,
NSC, v6-5
1067755 171

TTG ...

LVF ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    sORF
MEF, Neutrophil
426251 84

TTG ...

LSS ...

Ribo-seq
TTG

7 sORFs_org_Mouse
    sORF
E14, Liver, MEF,
Neutrophil, NSC, v6-5
74259 ENSMUST00000161079 Eif4g2-207 processed_transcript
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

74258 66

GTG ...

VNQ ...

Ribo-seq
GTG

moderate

3 sORFs_org_Mouse
    ncRNA
    sORF
3T3, Liver, Testis
416242 78

AAG ...

KNQ ...

Ribo-seq
AAG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
C2C12
912965 ENSMUST00000161158 Eif4g2-208 retained_intron
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

74258 66

GTG ...

VNQ ...

Ribo-seq
GTG

weak

3 sORFs_org_Mouse
    Intronic
    sORF
MEF, Neutrophil
594545 42

ATG ...

MKQ ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
MEF
912964 84

TTG ...

LEG ...

Ribo-seq
TTG

3 sORFs_org_Mouse
    Intronic
    sORF
BMDC, MEF, NSC
229184 36

ATG ...

MTW ...

Ribo-seq
ATG

weak

1 sORFs_org_Mouse
    Intronic
    sORF
v6-5
1068921 162

CTG ...

LLL ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    Intronic
    sORF
Neutrophil
1068691 159

CTG ...

LLS ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    Intronic
    sORF
Neutrophil
1067893 141

GTG ...

VMQ ...

Ribo-seq
GTG

weak

1 sORFs_org_Mouse
    Intronic
    sORF
Neutrophil
593387 48

TTG ...

LFT ...

Ribo-seq
TTG

weak

1 sORFs_org_Mouse
    Intronic
    sORF
v6-5
915732 246

ATT ...

ISS ...

Ribo-seq
ATT

weak

1 sORFs_org_Mouse
    Intronic
    sORF
BMDC
915162 39

AAG ...

KSF ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    Intronic
    sORF
BMDC
593287 ENSMUST00000163014 Eif4g2-214 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

594545 42

ATG ...

MKQ ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    sORF
3T3
593286 84

ATG ...

MIM ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    sORF
3T3
599798 108

ATG ...

MLC ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    sORF
3T3
599629 141

ATG ...

MIM ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    sORF
3T3
595943 51

ATG ...

MLC ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    sORF
3T3
211283 ENSMUST00000160552 Eif4g2-204 retained_intron
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

914674 234

ATC ...

IPL ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    Intronic
    sORF
BMDC
844526 243

CTG ...

LNS ...

Ribo-seq
CTG

weak

2 sORFs_org_Mouse
    Intronic
    sORF
B_cell, Liver
1251393 273

CTG ...

LNV ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Intronic
    sORF
E14
913953 48

AAG ...

KLF ...

Ribo-seq
AAG

moderate

1 sORFs_org_Mouse
    Intronic
    sORF
BMDC
211282 255

GTG ...

VTD ...

Ribo-seq
GTG

moderate

3 sORFs_org_Mouse
    Intronic
    sORF
B_cell, Brain, Liver
1253904 129

ATC ...

ILL ...

Ribo-seq
ATC

1 sORFs_org_Mouse
    Intronic
    sORF
E14
844845 207

GTG ...

VRE ...

Ribo-seq
GTG

moderate

2 sORFs_org_Mouse
    Intronic
    sORF
B_cell, Liver
594690 ENSMUST00000159305 Eif4g2-201 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

73153 90

CTG ...

LHE ...

Ribo-seq
CTG

weak

1 sORFs_org_Mouse
    sORF
Brain
227527 69

ATG ...

MTT ...

Ribo-seq
ATG

moderate

3 sORFs_org_Mouse
    sORF
Brain, MEF, R1E
977990 102

ATT ...

IIL ...

Ribo-seq
ATT

1 sORFs_org_Mouse
    sORF
MEF
216182 39

ATG ...

MKK ...

Ribo-seq
ATG

weak

4 sORFs_org_Mouse
    sORF
3T3, Liver, MEF,
R1E
915736 87

ATT ...

ILR ...

Ribo-seq
ATT

1 sORFs_org_Mouse
    sORF
MEF
911953 108

ATT ...

INI ...

Ribo-seq
ATT

1 sORFs_org_Mouse
    sORF
MEF
1099781 ENSMUST00000161790 Eif4g2-211 processed_transcript
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

211699 93

TTG ...

LVS ...

Ribo-seq
TTG

strong

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
217048 54

CTG ...

LPR ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
1099780 141

TTG ...

LRP ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    ncRNA
    sORF
v6-5
3044008 UNKNOWN_TRANSCRIPT
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

78007 255

ATG ...

MNL ...

Predicted
ATG

1 Samandi2017
    sORF
230455 108

ATG ...

MLS ...

Predicted
ATG

1 Samandi2017
    sORF
599629 141

ATG ...

MIM ...

Predicted
ATG

1 Samandi2017
    sORF
593051 ENSMUST00000162394 Eif4g2-212 retained_intron
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

593050 93

TTG ...

LKI ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    Intronic
    sORF
3T3

ORFs

182 ORFs
14 known transcripts
283 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

1097915 33

GTG...

VEM...

GTG sORF
BMDC, MEF, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
strong 4 sORFs_org_Mouse
589357 144

TTG...

LVL...

TTG sORF
3T3, B_cell, E14,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
strong 5 sORFs_org_Mouse
915633 219

ACG...

TPQ...

ACG sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
224047 42

ATG...

MDQ...

ATG sORF
Intronic
3T3, B_cell, BMDC,
E14, Liver, MEF,
Neutrophil, NSC, Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
strong 11 sORFs_org_Mouse
3888 ENSMUST00000161736 Eif4g2-210 retained_intron Ribo-seq
strong 1 sORFs_org_Mouse
915995 120

ATA...

IAR...

ATA sORF
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
77887 123

TTG...

LAS...

TTG sORF
BMDC, Brain, E14,
Liver, MEF, Spleen_B_cell,
Testis, 3T3, B_cell,
Neutrophil, NSC, R1E,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
8 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
12 sORFs_org_Mouse
1259920 216

ATA...

ISV...

ATA sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
594545 42

ATG...

MKQ...

ATG sORF
Intronic
B_cell, Brain, E14,
MEF, 3T3
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 3 sORFs_org_Mouse
912965 ENSMUST00000161158 Eif4g2-208 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
593287 ENSMUST00000163014 Eif4g2-214 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1689446 66

TTG...

LCL...

TTG Intronic
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

423209 ENSMUST00000159465 Eif4g2-202 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
74338 63

ATG...

MHQ...

ATG sORF
Intronic
Brain, Testis, Liver,
B_cell, BMDC, E14,
MEF, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
2 sORFs_org_Mouse
3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
1 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
9 sORFs_org_Mouse
77482 240

TTG...

LPP...

TTG sORF
E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5, Brain, Spleen_B_cell,
Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
8 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
4 sORFs_org_Mouse
1672288 30

CTG...

LRW...

CTG sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
913637 90

ATC...

IVQ...

ATC sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
78315 132

TTG...

LEN...

TTG sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5, BMDC, Spleen_B_cell,
Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
13 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
6 sORFs_org_Mouse
77427 174

GTG...

VHL...

GTG sORF
E14, Liver, MEF,
Testis, BMDC, Brain,
R1E, Spleen_B_cell, 3T3,
B_cell, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

73154 ENSMUST00000160132 Eif4g2-203 protein_coding Ribo-seq
4 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
5 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
11 sORFs_org_Mouse
1689699 60

TTG...

LQK...

TTG Intronic
sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

423209 ENSMUST00000159465 Eif4g2-202 retained_intron Ribo-seq
weak 1 sORFs_org_Mouse
4075 48

GTG...

VGP...

GTG Intronic
sORF
Skin_tumor
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3888 ENSMUST00000161736 Eif4g2-210 retained_intron Ribo-seq
1 sORFs_org_Mouse
1254546 138

ATC...

IPS...

ATC sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
77755 219

ATG...

MIS...

ATG sORF
B_cell, BMDC, Brain,
E14, MEF, Neutrophil,
NSC, R1E, v6-5,
Liver, Spleen_B_cell, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
12 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
7 sORFs_org_Mouse
426251 84

TTG...

LSS...

TTG sORF
BMDC, Spleen_B_cell, E14,
Liver, MEF, Neutrophil,
NSC, v6-5, 3T3
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
2 sORFs_org_Mouse
988218 ENSMUST00000160966 Eif4g2-205 protein_coding Ribo-seq
7 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
75411 51

ATG...

MEV...

ATG sORF
Liver, Testis, BMDC,
MEF, R1E, Spleen_B_cell,
3T3, B_cell, Brain,
E14, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

73154 ENSMUST00000160132 Eif4g2-203 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
5 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 15 sORFs_org_Mouse
594456 138

CTG...

LVQ...

CTG sORF
3T3, B_cell, Brain,
E14, NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
strong 6 sORFs_org_Mouse
78072 192

CTG...

LRR...

CTG sORF
3T3, B_cell, Brain,
E14, MEF, Neutrophil,
NSC, R1E, v6-5,
BMDC, Liver, Spleen_B_cell,
Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
13 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
6 sORFs_org_Mouse
843228 90

CTG...

LLK...

CTG sORF
B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
230455 108

ATG...

MLS...

ATG sORF
Brain, E14, Liver,
R1E, 3T3, B_cell,
BMDC, MEF, Neutrophil,
NSC, v6-5,
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
4 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
12 sORFs_org_Mouse
3044008 UNKNOWN_TRANSCRIPT Predicted
1 Samandi2017
212240 36

ATG...

MSA...

ATG sORF
Intronic
BMDC, Brain, B_cell,
E14, Liver, MEF,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 9 sORFs_org_Mouse
73154 ENSMUST00000160132 Eif4g2-203 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
224828 144

GTG...

VKI...

GTG sORF
Intronic
BMDC, E14, MEF,
R1E, B_cell, Brain,
Liver, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
4 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
11 sORFs_org_Mouse
3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
moderate 2 sORFs_org_Mouse
227527 69

ATG...

MTT...

ATG sORF
3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
v6-5, R1E, Spleen_B_cell,
C2C12
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 11 sORFs_org_Mouse
594690 ENSMUST00000159305 Eif4g2-201 protein_coding Ribo-seq
moderate 3 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
73154 ENSMUST00000160132 Eif4g2-203 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
594924 60

GTG...

VPC...

GTG sORF
3T3, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
2 sORFs_org_Mouse
227152 93

ATG...

MLS...

ATG sORF
Intronic
B_cell, BMDC, Brain,
E14, Liver, MEF,
Neutrophil, NSC, v6-5,
3T3, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
10 sORFs_org_Mouse
3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
2 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
2 sORFs_org_Mouse
1070200 282

GTG...

VRT...

GTG sORF
E14, Liver, MEF,
Neutrophil, NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
6 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
593387 48

TTG...

LFT...

TTG sORF
Intronic
3T3, B_cell, Brain,
E14, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 4 sORFs_org_Mouse
912965 ENSMUST00000161158 Eif4g2-208 retained_intron Ribo-seq
weak 1 sORFs_org_Mouse
912332 120

AGG...

RID...

AGG sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
226920 48

ATG...

MAQ...

ATG sORF
B_cell, BMDC, Brain,
E14, Liver, MEF,
Neutrophil, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
9 sORFs_org_Mouse
1257224 30

ATC...

IST...

ATC sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
1097393 48

ATG...

MYW...

ATG sORF
Brain, MEF, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 4 sORFs_org_Mouse
78333 102

ATG...

MNL...

ATG sORF
3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
v6-5, R1E, Spleen_B_cell,
Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
12 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
7 sORFs_org_Mouse
230711 63

ATG...

MAQ...

ATG sORF
E14, Liver, R1E,
3T3, B_cell, BMDC,
Brain, MEF, Neutrophil,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
3 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
13 sORFs_org_Mouse
77277 168

TTG...

LLR...

TTG sORF
BMDC, Brain, Liver,
MEF, Spleen_B_cell, Testis,
3T3, B_cell, E14,
Neutrophil, NSC, R1E,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
6 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
14 sORFs_org_Mouse
840426 39

TTG...

LKT...

TTG sORF
B_cell, Brain, E14,
Liver, MEF, Neutrophil,
NSC, BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
8 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
415853 33

AAG...

KND...

AAG sORF
BMDC, C2C12, MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
73154 ENSMUST00000160132 Eif4g2-203 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
73050 192

GTG...

VFI...

GTG Intronic
sORF
Brain, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3888 ENSMUST00000161736 Eif4g2-210 retained_intron Ribo-seq
2 sORFs_org_Mouse
535073 102

CTG...

LDP...

CTG Intronic
sORF
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

423209 ENSMUST00000159465 Eif4g2-202 retained_intron Ribo-seq
1 sORFs_org_Mouse
915736 87

ATT...

ILR...

ATT sORF
BMDC, E14, MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
73154 ENSMUST00000160132 Eif4g2-203 protein_coding Ribo-seq
1 sORFs_org_Mouse
594690 ENSMUST00000159305 Eif4g2-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
1026738 102

TTG...

LRE...

TTG Intronic
sORF
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3888 ENSMUST00000161736 Eif4g2-210 retained_intron Ribo-seq
1 sORFs_org_Mouse
73966 66

TTG...

LEN...

TTG Intronic
sORF
Brain, Liver, B_cell,
E14, MEF, Neutrophil,
NSC, v6-5, BMDC,
Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
moderate 2 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
8 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
3 sORFs_org_Mouse
1068267 168

GTG...

VFS...

GTG sORF
MEF, Neutrophil
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

988218 ENSMUST00000160966 Eif4g2-205 protein_coding Ribo-seq
3 sORFs_org_Mouse
596479 48

CTG...

LKS...

CTG sORF
3T3, B_cell, BMDC,
Brain, E14, MEF,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 9 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
74258 66

GTG...

VNQ...

GTG ncRNA
sORF
Intronic
3T3, Liver, Testis,
MEF, Neutrophil
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

74259 ENSMUST00000161079 Eif4g2-207 processed_transcript Ribo-seq
moderate 3 sORFs_org_Mouse
912965 ENSMUST00000161158 Eif4g2-208 retained_intron Ribo-seq
weak 3 sORFs_org_Mouse
234741 66

TTG...

LMA...

TTG sORF
Brain, Liver, R1E,
3T3, B_cell, E14,
MEF, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
3 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
11 sORFs_org_Mouse
74767 153

ATG...

MIS...

ATG sORF
Intronic
BMDC, Brain, Liver,
MEF, Testis, B_cell,
E14, Neutrophil, NSC,
v6-5, 3T3, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
5 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
10 sORFs_org_Mouse
3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
weak 4 sORFs_org_Mouse
78126 114

TTG...

LIL...

TTG sORF
BMDC, Brain, Liver,
R1E, Spleen_B_cell, Testis,
3T3, B_cell, E14,
MEF, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
6 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
12 sORFs_org_Mouse
214049 51

TTG...

LMA...

TTG sORF
Intronic
B_cell, E14, Liver,
MEF, Neutrophil, v6-5,
Brain, 3T3
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
7 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
1 sORFs_org_Mouse
913319 42

AGG...

RAK...

AGG sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
216182 39

ATG...

MKK...

ATG sORF
B_cell, BMDC, Brain,
E14, MEF, Neutrophil,
NSC, v6-5, Spleen_B_cell,
3T3, Liver, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 11 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
594690 ENSMUST00000159305 Eif4g2-201 protein_coding Ribo-seq
weak 4 sORFs_org_Mouse
912604 33

ATT...

IRE...

ATT sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
600008 180

TTG...

LLI...

TTG sORF
3T3, B_cell, Brain,
E14, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
7 sORFs_org_Mouse
593050 93

TTG...

LKI...

TTG sORF
Intronic
E14, MEF, Neutrophil,
NSC, v6-5, 3T3,
BMDC, B_cell, Brain,
Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

988218 ENSMUST00000160966 Eif4g2-205 protein_coding Ribo-seq
6 sORFs_org_Mouse
593051 ENSMUST00000162394 Eif4g2-212 retained_intron Ribo-seq
1 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
3 sORFs_org_Mouse
229957 144

GTG...

VHS...

GTG sORF
Brain, E14, 3T3,
B_cell, BMDC, MEF,
Neutrophil, NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
2 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
10 sORFs_org_Mouse
590252 33

GTG...

VAA...

GTG sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 12 sORFs_org_Mouse
73154 ENSMUST00000160132 Eif4g2-203 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
844236 135

CTG...

LRL...

CTG sORF
B_cell, BMDC, Brain,
E14, Liver, MEF,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 7 sORFs_org_Mouse
228276 48

TTG...

LIL...

TTG sORF
Intronic
BMDC, Brain, B_cell,
E14, Liver, MEF,
Neutrophil, NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
2 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
8 sORFs_org_Mouse
3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
914674 234

ATC...

IPL...

ATC Intronic
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

211283 ENSMUST00000160552 Eif4g2-204 retained_intron Ribo-seq
1 sORFs_org_Mouse
916445 105

ATA...

ITR...

ATA sORF
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
2 sORFs_org_Mouse
593286 84

ATG...

MIM...

ATG sORF
3T3, Brain, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

593287 ENSMUST00000163014 Eif4g2-214 protein_coding Ribo-seq
1 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
2 sORFs_org_Mouse
913802 36

AAG...

KQG...

AAG sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
914268 39

AGG...

RIE...

AGG sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
913480 168

ACG...

TSS...

ACG sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
915423 45

ATC...

ILF...

ATC sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
844526 243

CTG...

LNS...

CTG Intronic
sORF
B_cell, Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

211283 ENSMUST00000160552 Eif4g2-204 retained_intron Ribo-seq
weak 2 sORFs_org_Mouse
73153 90

CTG...

LHE...

CTG sORF
Brain, BMDC, MEF,
R1E, Spleen_B_cell, 3T3,
B_cell, E14, Liver,
Neutrophil, NSC, v6-5,
C2C12, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

594690 ENSMUST00000159305 Eif4g2-201 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
weak 4 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 11 sORFs_org_Mouse
73154 ENSMUST00000160132 Eif4g2-203 protein_coding Ribo-seq
weak 5 sORFs_org_Mouse
78007 255

ATG...

MNL...

ATG sORF
3T3, BMDC, Brain,
E14, Liver, MEF,
Spleen_B_cell, Testis, v6-5,
B_cell, Neutrophil,
NSC, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
9 sORFs_org_Mouse
3044008 UNKNOWN_TRANSCRIPT Predicted
1 Samandi2017
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
11 sORFs_org_Mouse
598555 135

ATG...

MWI...

ATG sORF
3T3, Brain, E14,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
5 sORFs_org_Mouse
211699 93

TTG...

LVS...

TTG ncRNA
sORF
MEF, 3T3, B_cell,
BMDC, Brain, E14,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1099781 ENSMUST00000161790 Eif4g2-211 processed_transcript Ribo-seq
strong 1 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
strong 10 sORFs_org_Mouse
74091 147

CTG...

LEG...

CTG Intronic
sORF
Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3888 ENSMUST00000161736 Eif4g2-210 retained_intron Ribo-seq
1 sORFs_org_Mouse
912964 84

TTG...

LEG...

TTG Intronic
sORF
BMDC, MEF, NSC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

912965 ENSMUST00000161158 Eif4g2-208 retained_intron Ribo-seq
3 sORFs_org_Mouse
3887 78

TTG...

LEC...

TTG Intronic
sORF
Brain, Skin_tumor, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3888 ENSMUST00000161736 Eif4g2-210 retained_intron Ribo-seq
3 sORFs_org_Mouse
533737 159

CTG...

LSF...

CTG Intronic
sORF
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

423209 ENSMUST00000159465 Eif4g2-202 retained_intron Ribo-seq
1 sORFs_org_Mouse
592772 150

GTG...

VEL...

GTG sORF
3T3, B_cell, BMDC,
Brain, E14, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
strong 7 sORFs_org_Mouse
1251393 273

CTG...

LNV...

CTG Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

211283 ENSMUST00000160552 Eif4g2-204 retained_intron Ribo-seq
1 sORFs_org_Mouse
1068716 42

TTG...

LIE...

TTG sORF
MEF, Neutrophil, NSC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 3 sORFs_org_Mouse
77539 204

GTG...

VLL...

GTG sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, v6-5,
BMDC, R1E, Spleen_B_cell,
Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
11 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
5 sORFs_org_Mouse
73154 ENSMUST00000160132 Eif4g2-203 protein_coding Ribo-seq
3 sORFs_org_Mouse
217048 54

CTG...

LPR...

CTG ncRNA
sORF
MEF, 3T3, B_cell,
Brain, E14, Neutrophil,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1099781 ENSMUST00000161790 Eif4g2-211 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 10 sORFs_org_Mouse
599798 108

ATG...

MLC...

ATG sORF
3T3, B_cell, Brain,
E14, MEF, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

593287 ENSMUST00000163014 Eif4g2-214 protein_coding Ribo-seq
1 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
6 sORFs_org_Mouse
913516 39

AAG...

KIW...

AAG sORF
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
75386 45

GTG...

VAA...

GTG sORF
3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
v6-5, Testis, R1E,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
strong 13 sORFs_org_Mouse
73154 ENSMUST00000160132 Eif4g2-203 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
6 sORFs_org_Mouse
916772 111

ATC...

ILF...

ATC sORF
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
422974 66

CTG...

LLL...

CTG sORF
3T3, B_cell, Brain,
MEF, NSC, v6-5,
Liver, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 7 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
weak 2 sORFs_org_Mouse
589533 93

TTG...

LFS...

TTG sORF
3T3, B_cell, BMDC,
Brain, E14, MEF,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 7 sORFs_org_Mouse
77166 78

ATG...

MHQ...

ATG sORF
3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
v6-5, R1E, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
12 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
5 sORFs_org_Mouse
1259084 45

AGG...

RNC...

AGG sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
599629 141

ATG...

MIM...

ATG sORF
BMDC, Brain, E14,
MEF, NSC, v6-5,
3T3,
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
6 sORFs_org_Mouse
593287 ENSMUST00000163014 Eif4g2-214 protein_coding Ribo-seq
1 sORFs_org_Mouse
3044008 UNKNOWN_TRANSCRIPT Predicted
1 Samandi2017
222065 42

ATG...

MTS...

ATG sORF
Liver, Spleen_B_cell, 3T3,
B_cell, BMDC, Brain,
MEF, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 9 sORFs_org_Mouse
912030 30

AGG...

RWR...

AGG sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
588998 39

TTG...

LTS...

TTG sORF
3T3, B_cell, Brain,
E14, MEF, NSC,
v6-5, BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 8 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
591692 78

ATG...

MWI...

ATG sORF
3T3, Brain, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
3 sORFs_org_Mouse
977990 102

ATT...

IIL...

ATT sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

594690 ENSMUST00000159305 Eif4g2-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
76210 36

ATG...

MNL...

ATG sORF
B_cell, BMDC, Brain,
E14, MEF, Neutrophil,
NSC, v6-5, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
8 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
2 sORFs_org_Mouse
1250415 117

AGG...

RNR...

AGG sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
912036 105

ATA...

IAR...

ATA sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
595943 51

ATG...

MLC...

ATG sORF
E14, 3T3
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
593287 ENSMUST00000163014 Eif4g2-214 protein_coding Ribo-seq
1 sORFs_org_Mouse
911880 42

ACG...

TTG...

ACG sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
4471 102

TTG...

LLR...

TTG sORF
Intronic
BMDC, Brain, MEF,
Skin_tumor, Testis, B_cell,
E14, Liver, Neutrophil,
NSC, v6-5, 3T3,
R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
5 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
10 sORFs_org_Mouse
3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
weak 4 sORFs_org_Mouse
229184 36

ATG...

MTW...

ATG Intronic
sORF
v6-5, 3T3, B_cell,
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

912965 ENSMUST00000161158 Eif4g2-208 retained_intron Ribo-seq
weak 1 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 3 sORFs_org_Mouse
594807 51

TTG...

LIR...

TTG Intronic
sORF
MEF, 3T3, B_cell,
E14, Neutrophil, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

423209 ENSMUST00000159465 Eif4g2-202 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 7 sORFs_org_Mouse
213042 57

TTG...

LAS...

TTG sORF
Intronic
B_cell, Brain, E14,
MEF, Neutrophil, NSC,
v6-5, BMDC, Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
7 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
3 sORFs_org_Mouse
3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
strong 1 sORFs_org_Mouse
598560 189

TTG...

LGD...

TTG sORF
3T3, B_cell, Brain,
E14, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
7 sORFs_org_Mouse
423769 174

TTG...

LEG...

TTG Intronic
sORF
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

423209 ENSMUST00000159465 Eif4g2-202 retained_intron Ribo-seq
1 sORFs_org_Mouse
1067755 171

TTG...

LVF...

TTG sORF
MEF, Neutrophil
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

988218 ENSMUST00000160966 Eif4g2-205 protein_coding Ribo-seq
2 sORFs_org_Mouse
78335 150

CTG...

LLA...

CTG sORF
E14, Liver, Testis,
3T3, B_cell, BMDC,
Brain, MEF, Neutrophil,
NSC, v6-5, R1E,
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

73154 ENSMUST00000160132 Eif4g2-203 protein_coding Ribo-seq
3 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
13 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
5 sORFs_org_Mouse
877319 105

CTG...

LRL...

CTG Intronic
sORF
Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
1 sORFs_org_Mouse
1068921 162

CTG...

LLL...

CTG Intronic
sORF
Neutrophil
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

912965 ENSMUST00000161158 Eif4g2-208 retained_intron Ribo-seq
weak 1 sORFs_org_Mouse
1258341 204

ATC...

IPS...

ATC sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
1256173 150

ATA...

ISV...

ATA sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
913953 48

AAG...

KLF...

AAG Intronic
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

211283 ENSMUST00000160552 Eif4g2-204 retained_intron Ribo-seq
moderate 1 sORFs_org_Mouse
913185 81

ATC...

ISS...

ATC sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
915940 93

AGG...

RDS...

AGG sORF
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
2 sORFs_org_Mouse
1068691 159

CTG...

LLS...

CTG Intronic
sORF
Neutrophil
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

912965 ENSMUST00000161158 Eif4g2-208 retained_intron Ribo-seq
weak 1 sORFs_org_Mouse
911628 36

AGG...

RKG...

AGG sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
227035 48

GTG...

VPL...

GTG sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, v6-5,
BMDC, R1E, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 12 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
moderate 4 sORFs_org_Mouse
3904 123

TTG...

LEK...

TTG Intronic
sORF
Brain, Skin_tumor, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3888 ENSMUST00000161736 Eif4g2-210 retained_intron Ribo-seq
3 sORFs_org_Mouse
77811 210

GTG...

VKI...

GTG sORF
BMDC, Liver, MEF,
R1E, Spleen_B_cell, Testis,
3T3, B_cell, Brain,
E14, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
6 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
13 sORFs_org_Mouse
1067893 141

GTG...

VMQ...

GTG Intronic
sORF
Neutrophil
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

912965 ENSMUST00000161158 Eif4g2-208 retained_intron Ribo-seq
weak 1 sORFs_org_Mouse
1026143 216

GTG...

VRT...

GTG Intronic
sORF
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
1 sORFs_org_Mouse
1259970 48

AGG...

RVN...

AGG sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
879146 54

GTG...

VAA...

GTG sORF
Liver, MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
3 sORFs_org_Mouse
211282 255

GTG...

VTD...

GTG Intronic
sORF
B_cell, Brain, Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

211283 ENSMUST00000160552 Eif4g2-204 retained_intron Ribo-seq
moderate 3 sORFs_org_Mouse
916485 60

AGG...

RIC...

AGG sORF
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
2 sORFs_org_Mouse
215424 48

TTG...

LTM...

TTG sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 12 sORFs_org_Mouse
423908 183

TTG...

LEI...

TTG Intronic
sORF
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

423209 ENSMUST00000159465 Eif4g2-202 retained_intron Ribo-seq
1 sORFs_org_Mouse
415862 108

ACG...

TLR...

ACG sORF
C2C12, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

73154 ENSMUST00000160132 Eif4g2-203 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
592947 30

CTG...

LLQ...

CTG sORF
3T3, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
2 sORFs_org_Mouse
912127 99

ATT...

ILL...

ATT sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
1097085 45

GTG...

VAP...

GTG sORF
Brain, E14, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
strong 3 sORFs_org_Mouse
598374 168

TTG...

LDK...

TTG sORF
3T3, B_cell, BMDC,
Brain, E14, Neutrophil,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
8 sORFs_org_Mouse
533299 159

GTG...

VDK...

GTG Intronic
sORF
Liver, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
2 sORFs_org_Mouse
877196 123

CTG...

LYA...

CTG Intronic
sORF
Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
1 sORFs_org_Mouse
77007 249

TTG...

LKT...

TTG sORF
3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, NSC, R1E,
BMDC, Spleen_B_cell, Testis,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
12 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
7 sORFs_org_Mouse
911953 108

ATT...

INI...

ATT sORF
BMDC, MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
594690 ENSMUST00000159305 Eif4g2-201 protein_coding Ribo-seq
1 sORFs_org_Mouse
916873 72

AAG...

KDS...

AAG sORF
BMDC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
2 sORFs_org_Mouse
416494 159

ATC...

IPR...

ATC sORF
BMDC, C2C12, E14,
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
73154 ENSMUST00000160132 Eif4g2-203 protein_coding Ribo-seq
2 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
916737 201

ATA...

IGT...

ATA sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
588972 60

GTG...

VVN...

GTG sORF
3T3, BMDC, E14,
MEF, NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
7 sORFs_org_Mouse
416242 78

AAG...

KNQ...

AAG ncRNA
sORF
C2C12
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

74259 ENSMUST00000161079 Eif4g2-207 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
916774 99

AGG...

RCT...

AGG sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
423319 132

TTG...

LEK...

TTG Intronic
sORF
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

423209 ENSMUST00000159465 Eif4g2-202 retained_intron Ribo-seq
1 sORFs_org_Mouse
1097236 63

ATG...

MGG...

ATG sORF
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
strong 2 sORFs_org_Mouse
531485 63

GTG...

VGV...

GTG Intronic
sORF
Brain, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
2 sORFs_org_Mouse
1070207 87

GTG...

VAA...

GTG sORF
Brain, E14, MEF,
Neutrophil
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
5 sORFs_org_Mouse
1258620 183

AGG...

RNR...

AGG sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
77907 147

CTG...

LAT...

CTG sORF
Liver, Testis, BMDC,
MEF, R1E, Spleen_B_cell,
3T3, B_cell, Brain,
E14, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

73154 ENSMUST00000160132 Eif4g2-203 protein_coding Ribo-seq
2 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
4 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
12 sORFs_org_Mouse
1575901 90

AAG...

KIL...

AAG sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
1253904 129

ATC...

ILL...

ATC Intronic
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

211283 ENSMUST00000160552 Eif4g2-204 retained_intron Ribo-seq
1 sORFs_org_Mouse
3697 126

CTG...

LRR...

CTG sORF
Intronic
BMDC, Liver, MEF,
B_cell, Brain, E14,
Neutrophil, NSC, v6-5,
R1E, Skin_tumor
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
3 sORFs_org_Mouse
72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
10 sORFs_org_Mouse
3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
weak 4 sORFs_org_Mouse
1254923 39

AGG...

RNC...

AGG sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
72133 96

TTG...

LGF...

TTG sORF
3T3, B_cell, Brain,
Liver, MEF, Neutrophil,
NSC, R1E, Spleen_B_cell,
Testis, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
16 sORFs_org_Mouse
1068594 84

GTG...

VHL...

GTG sORF
Neutrophil
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
1259734 132

AAG...

KSQ...

AAG sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
1 sORFs_org_Mouse
911689 63

ATC...

IHP...

ATC sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
916657 66

GTG...

VKA...

GTG sORF
BMDC, Brain, E14,
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
4 sORFs_org_Mouse
913734 42

AGG...

RSV...

AGG sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
879781 60

ATG...

MEV...

ATG sORF
Liver, MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
3 sORFs_org_Mouse
1254652 72

ATT...

IGF...

ATT sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
916016 75

ATA...

ICR...

ATA sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
4180 42

CTG...

LSD...

CTG sORF
Intronic
B_cell, BMDC, Brain,
E14, Liver, MEF,
NSC, v6-5, Skin_tumor,
R1E, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 10 sORFs_org_Mouse
3888 ENSMUST00000161736 Eif4g2-210 retained_intron Ribo-seq
weak 1 sORFs_org_Mouse
4472 ENSMUST00000161051 Eif4g2-206 protein_coding Ribo-seq
weak 3 sORFs_org_Mouse
1068281 33

GTG...

VMK...

GTG sORF
MEF, Neutrophil
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
844845 207

GTG...

VRE...

GTG Intronic
sORF
B_cell, Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

211283 ENSMUST00000160552 Eif4g2-204 retained_intron Ribo-seq
moderate 2 sORFs_org_Mouse
915483 60

ATA...

ISL...

ATA sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
915732 246

ATT...

ISS...

ATT Intronic
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

912965 ENSMUST00000161158 Eif4g2-208 retained_intron Ribo-seq
weak 1 sORFs_org_Mouse
602398 117

GTG...

VPC...

GTG sORF
3T3, Brain, E14,
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
5 sORFs_org_Mouse
915926 39

AAG...

KSF...

AAG sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
601356 177

CTG...

LIC...

CTG sORF
3T3, B_cell, Brain,
E14, Neutrophil, NSC,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
7 sORFs_org_Mouse
596859 174

TTG...

LPP...

TTG Intronic
sORF
3T3, Brain, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

3698 ENSMUST00000161682 Eif4g2-209 retained_intron Ribo-seq
3 sORFs_org_Mouse
1099223 69

ATG...

MAM...

ATG sORF
NSC, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 2 sORFs_org_Mouse
842986 45

ATG...

MNL...

ATG sORF
B_cell, Brain, E14,
Liver, MEF, Neutrophil,
NSC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
8 sORFs_org_Mouse
916647 123

AGG...

RSV...

AGG sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse
840860 87

CTG...

LKK...

CTG sORF
B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
weak 1 sORFs_org_Mouse
1791218 30

ATG...

MKI...

ATG sORF
MEF
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
915162 39

AAG...

KSF...

AAG Intronic
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

912965 ENSMUST00000161158 Eif4g2-208 retained_intron Ribo-seq
1 sORFs_org_Mouse
1099780 141

TTG...

LRP...

TTG ncRNA
sORF
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1099781 ENSMUST00000161790 Eif4g2-211 processed_transcript Ribo-seq
1 sORFs_org_Mouse
423208 117

TTG...

LKQ...

TTG Intronic
sORF
Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

423209 ENSMUST00000159465 Eif4g2-202 retained_intron Ribo-seq
1 sORFs_org_Mouse
1258179 33

AAG...

KDS...

AAG sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

72134 ENSMUST00000162415 Eif4g2-213 protein_coding Ribo-seq
1 sORFs_org_Mouse

Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

bidirectional_promoter_lncRNA

IG_C_gene

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

pseudogene

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

3T3

B_cell

BMDC

Brain

C2C12

E14

Glioma

Liver

MEF

MESC

Neutrophil

NSC

R1E

Skin_tumor

Spleen_B_cell

Testis

v6-5