Gene NCBI:13002 | MetamORF

Gene

ID CARD

NCBI:13002

Aliases

2610314I24Rik
AU018536, Csp, Dnajc5
ENSMUSG00000000826, MGI:892995, NCBI:13002
OFF:Dnajc5

Chromosome

Transcripts

81 ORFs
6 known transcripts
178 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

15631

ENSMUST00000072334

Dnajc5-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
412470	159	ACG ...	TES ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative sORF Upstream	C2C12
109744	99	CTG ...	LRV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain
98637	123	GTG ...	VGN ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, R1E
102868	36	CTG ...	LLL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
116555	57	TTG ...	LGR ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain
736692	78	CTG ...	LPP ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	sORF Upstream	3T3, B_cell
93776	66	TTG ...	LDW ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
412884	180	ACG ...	TES ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	C2C12
94743	39	CTG ...	LLL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
100446	72	ATG ...	MFL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
97894	93	GTG ...	VRR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
742339	117	CTG ...	LSP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative sORF Upstream	3T3
815103	183	GTG ...	VSE ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Neutrophil
808649	210	GTG ...	VSE ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	B_cell
104966	54	TTG ...	LWP ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
744724	78	CTG ...	LPT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF Upstream	3T3
95597	45	GTG ...	VAG ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream sORF	Brain
741338	81	TTG ...	LLP ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	sORF Upstream	3T3, B_cell, Brain
121828	126	CTG ...	LLR ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative sORF Upstream	3T3, Brain, MEF, Neutrophil, Spleen_B_cell
103067	30	CTG ...	LLL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
107299	66	CTG ...	LKT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
814105	189	GTG ...	VPV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	B_cell
15630	72	CTG ...	LTR ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Skin_tumor
124979	132	CTG ...	LPL ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative sORF Upstream	3T3, B_cell, Brain, MEF, Neutrophil, Spleen_B_cell
744259	63	CTG ...	LPR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative sORF Upstream	3T3
966963	279	GTG ...	VRV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	E14
123390	63	TTG ...	LDW ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
730002	66	TTG ...	LLP ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	sORF Upstream	Brain
98796	90	ATG ...	MAR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
95832	72	CTG ...	LPT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF Upstream	3T3
103853	30	CTG ...	LWE ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
103827	69	GTG ...	VLL ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	sORF Upstream	3T3, Brain
104974	51	ATG ...	MQP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
120407	48	ATG ...	MQP ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
115833	99	ATG ...	MTS ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain
743913	156	GTG ...	VDR ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Brain, Liver, MEF
94962	60	CTG ...	LIT ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain
122926	300	GTG ...	VRV ...	Ribo-seq	GTG		10	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, B_cell, BMDC, Brain, E14, MEF, Neutrophil, NSC, Spleen_B_cell
122962	69	ATG ...	MFL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
107088	45	CTG ...	LQT ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain
116301	33	CTG ...	LLW ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, R1E
113848	183	GTG ...	VAS ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain
93453	72	ATG ...	MWR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain
117442	192	TTG ...	LLF ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain
97183	36	CTG ...	LLL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
808891	216	GTG ...	VPV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	B_cell
119328	36	ATG ...	MTL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
112932	189	TTG ...	LFV ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain

43906

ENSMUST00000116365

Dnajc5-204

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
45772	120	CTG ...	LGL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, Neutrophil, Testis
103827	69	GTG ...	VLL ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	NMD sORF Upstream	BMDC, Neutrophil
98796	90	ATG ...	MAR ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, MEF, v6-5
115833	99	ATG ...	MTS ...	Ribo-seq	ATG		4	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, MEF, v6-5
95832	72	CTG ...	LPT ...	Ribo-seq	CTG		4	sORFs_org_Mouse	NMD sORF Upstream	Brain, MEF, Neutrophil
964438	39	ACG ...	TAV ...	Ribo-seq	ACG	strong	1	sORFs_org_Mouse	NMD sORF Upstream	BMDC
810284	39	ATG ...	MTL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, Neutrophil
94515	39	ATG ...	MNQ ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain, MEF
109744	99	CTG ...	LRV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, MEF
97894	93	GTG ...	VRR ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, MEF, Neutrophil
43905	165	CTG ...	LTD ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, Neutrophil, Testis, v6-5
112064	225	GTG ...	VPV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain
103067	30	CTG ...	LLL ...	Ribo-seq	CTG	weak	7	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, E14, MEF, NSC, v6-5
116224	75	CTG ...	LLT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain
93494	42	ATG ...	MIS ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative NMD sORF Upstream	Brain, Neutrophil, NSC
94962	60	CTG ...	LIT ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, Liver, MEF, v6-5
730002	66	TTG ...	LLP ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	NMD sORF Upstream	3T3, BMDC, Neutrophil
98637	123	GTG ...	VGN ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain
96145	264	CTG ...	LFV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain, Neutrophil
1053846	216	TTG ...	LCC ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative CDS NMD sORF	Neutrophil
93776	66	TTG ...	LDW ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, Neutrophil, NSC
117442	192	TTG ...	LLF ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, v6-5
93453	72	ATG ...	MWR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, v6-5
1641555	30	GTG ...	VVA ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Downstream NMD sORF	MEF
97183	36	CTG ...	LLL ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, E14, MEF, NSC
116555	57	TTG ...	LGR ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, MEF, v6-5
48383	246	CTG ...	LKY ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, MEF, Neutrophil, Testis, v6-5
102868	36	CTG ...	LLL ...	Ribo-seq	CTG	weak	7	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, E14, MEF, NSC, v6-5
113848	183	GTG ...	VAS ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, v6-5
100446	72	ATG ...	MFL ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, MEF, Neutrophil, NSC
47707	48	CTG ...	LTA ...	Ribo-seq	CTG	weak	5	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain, E14, MEF, Neutrophil, Testis
116826	99	TTG ...	LCD ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Downstream NMD sORF	Brain
965738	42	GTG ...	VPT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative NMD sORF Upstream	BMDC
104974	51	ATG ...	MQP ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, Neutrophil, NSC
103853	30	CTG ...	LWE ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, E14, MEF, NSC
497621	144	CTG ...	LSP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative NMD sORF Upstream	MEF, Neutrophil
112932	189	TTG ...	LFV ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, v6-5
811281	90	CTG ...	LPR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative NMD sORF Upstream	BMDC, Neutrophil
116301	33	CTG ...	LLW ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, E14, MEF, NSC
107088	45	CTG ...	LQT ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, Liver, MEF
101201	63	CTG ...	LTP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain
47943	252	CTG ...	LAL ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, E14, MEF, Neutrophil, Testis, v6-5
94743	39	CTG ...	LLL ...	Ribo-seq	CTG	weak	6	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, E14, MEF, NSC, v6-5
104966	54	TTG ...	LWP ...	Ribo-seq	TTG	weak	5	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, MEF, NSC, v6-5
1641174	36	GTG ...	VFV ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Downstream NMD sORF	MEF
47440	48	CTG ...	LDK ...	Ribo-seq	CTG		10	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, E14, Liver, MEF, Neutrophil, NSC, Testis, v6-5
15630	72	CTG ...	LTR ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, E14, MEF
107299	66	CTG ...	LKT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain
966963	279	GTG ...	VRV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative NMD sORF Upstream	BMDC
497805	153	CTG ...	LLR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative NMD sORF Upstream	Neutrophil
493268	159	CTG ...	LPL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative NMD sORF Upstream	Neutrophil
46416	108	GTG ...	VAE ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Neutrophil, Testis

93777

ENSMUST00000108797

Dnajc5-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
95832	72	CTG ...	LPT ...	Ribo-seq	CTG		3	sORFs_org_Mouse	sORF Upstream	B_cell, E14, Spleen_B_cell
107088	45	CTG ...	LQT ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
123813	141	ATG ...	MQK ...	Ribo-seq	ATG		15	sORFs_org_Mouse Johnstone2016	Alternative Overlapping sORF Upstream	B_cell, BMDC, Brain, E14, Glioma, Liver, MEF, MESC, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
104966	54	TTG ...	LWP ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
497805	153	CTG ...	LLR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Spleen_B_cell
15630	72	CTG ...	LTR ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
810284	39	ATG ...	MTL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
117442	192	TTG ...	LLF ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
1207669	75	AAG ...	KRS ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative sORF Upstream	E14
93776	66	TTG ...	LDW ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain
119328	36	ATG ...	MTL ...	Ribo-seq	ATG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, MEF, Neutrophil, NSC, v6-5
497621	144	CTG ...	LSP ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, E14, Spleen_B_cell
113848	183	GTG ...	VAS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
109744	99	CTG ...	LRV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, Spleen_B_cell
119991	33	GTG ...	VHL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF Upstream	Brain, MEF
94962	60	CTG ...	LIT ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
120407	48	ATG ...	MQP ...	Ribo-seq	ATG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, MEF, Neutrophil, NSC, v6-5
104974	51	ATG ...	MQP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
100446	72	ATG ...	MFL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
102868	36	CTG ...	LLL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
116301	33	CTG ...	LLW ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Spleen_B_cell
115833	99	ATG ...	MTS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
730002	66	TTG ...	LLP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF Upstream	B_cell
94515	39	ATG ...	MNQ ...	Ribo-seq	ATG	moderate	1	Johnstone2016	Alternative Downstream sORF	Glioma, Liver, MEF, MESC
125193	75	CTG ...	LPT ...	Ribo-seq	CTG		7	sORFs_org_Mouse	sORF Upstream	B_cell, Brain, E14, MEF, Neutrophil, Spleen_B_cell
103853	30	CTG ...	LWE ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Spleen_B_cell
103827	69	GTG ...	VLL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	sORF Upstream	B_cell, Brain, Spleen_B_cell
107299	66	CTG ...	LKT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
122962	69	ATG ...	MFL ...	Ribo-seq	ATG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
123390	63	TTG ...	LDW ...	Ribo-seq	TTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, E14, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
103067	30	CTG ...	LLL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
97894	93	GTG ...	VRR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, Spleen_B_cell
93494	42	ATG ...	MIS ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	Alternative sORF Upstream	B_cell, Glioma, Liver, MEF, MESC
971875	93	ACG ...	TES ...	Ribo-seq	ACG		2	sORFs_org_Mouse	Alternative sORF Upstream	BMDC, E14
122674	69	GTG ...	VDR ...	Ribo-seq	GTG		8	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Brain, E14, MEF, Neutrophil, NSC, Spleen_B_cell
97183	36	CTG ...	LLL ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Spleen_B_cell
98637	123	GTG ...	VGN ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, Spleen_B_cell
93453	72	ATG ...	MWR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
98796	90	ATG ...	MAR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
94743	39	CTG ...	LLL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
493268	159	CTG ...	LPL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Spleen_B_cell
112932	189	TTG ...	LFV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
811281	90	CTG ...	LPR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, E14
964438	39	ACG ...	TAV ...	Ribo-seq	ACG	strong	1	sORFs_org_Mouse	sORF Upstream	E14

746846

ENSMUST00000108796

Dnajc5-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
117442	192	TTG ...	LLF ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Brain
113848	183	GTG ...	VAS ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Brain
746845	159	CTG ...	LGR ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Overlapping sORF Upstream	3T3, MEF, Neutrophil, NSC, v6-5
116555	57	TTG ...	LGR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
115833	99	ATG ...	MTS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
93453	72	ATG ...	MWR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
120407	48	ATG ...	MQP ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
122962	69	ATG ...	MFL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
104966	54	TTG ...	LWP ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
98796	90	ATG ...	MAR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
94743	39	CTG ...	LLL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
93776	66	TTG ...	LDW ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF
15630	72	CTG ...	LTR ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
102868	36	CTG ...	LLL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
100446	72	ATG ...	MFL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF
123390	63	TTG ...	LDW ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF
119328	36	ATG ...	MTL ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF
112932	189	TTG ...	LFV ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Brain

118501

ENSMUST00000152578

Dnajc5-206

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
810284	39	ATG ...	MTL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	R1E
119328	36	ATG ...	MTL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	R1E
93453	72	ATG ...	MWR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	BMDC
115833	99	ATG ...	MTS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	BMDC
116555	57	TTG ...	LGR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	BMDC
93776	66	TTG ...	LDW ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	R1E
122962	69	ATG ...	MFL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	R1E
118500	135	CTG ...	LTN ...	Ribo-seq	CTG		13	sORFs_org_Mouse	sORF	3T3, B_cell, BMDC, Brain, E14, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
123390	63	TTG ...	LDW ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	R1E
969907	45	ACG ...	TST ...	Ribo-seq	ACG		1	sORFs_org_Mouse	sORF	BMDC
100446	72	ATG ...	MFL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	R1E
120407	48	ATG ...	MQP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	R1E
98796	90	ATG ...	MAR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	sORF	3T3, BMDC
104974	51	ATG ...	MQP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	R1E

496385

ENSMUST00000141523

Dnajc5-205

processed_transcript

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

101201

CTG ...

LTP ...

Ribo-seq

CTG

weak

sORFs_org_Mouse

Brain

47707

CTG ...

LTA ...

Ribo-seq

CTG

sORFs_org_Mouse

3T3, Brain, R1E,
Spleen_B_cell

3048185

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
123813	141	ATG ...	MQK ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

81 ORFs
6 known transcripts
178 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

412470

159

ACG...

TES...

ACG

Alternative
sORF
Upstream

C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

45772

120

CTG...

LGL...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

Brain, Neutrophil, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

109744

CTG...

LRV...

CTG

InCDS
Overlapping
sORF
NMD

3T3, Brain, MEF,
B_cell, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse

103827

GTG...

VLL...

GTG

NMD
sORF
Upstream

BMDC, Neutrophil, B_cell,
Brain, Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

95832

CTG...

LPT...

CTG

sORF
Upstream
NMD

B_cell, E14, Spleen_B_cell,
Brain, MEF, Neutrophil,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

98796

ATG...

MAR...

ATG

InCDS
NMD
Overlapping
sORF

Brain, MEF, v6-5,
3T3, BMDC, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
118501	ENSMUST00000152578	Dnajc5-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

115833

ATG...

MTS...

ATG

InCDS
NMD
Overlapping
sORF

Brain, MEF, v6-5,
BMDC, B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
118501	ENSMUST00000152578	Dnajc5-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

117442

192

TTG...

LLF...

TTG

InCDS
Overlapping
sORF
NMD

BMDC, Brain, B_cell,
v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

810284

ATG...

MTL...

ATG

sORF
Alternative
InCDS
NMD
Overlapping

R1E, MEF, Neutrophil,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
118501	ENSMUST00000152578	Dnajc5-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

113848

183

GTG...

VAS...

GTG

InCDS
Overlapping
sORF
NMD

BMDC, Brain, B_cell,
v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

98637

123

GTG...

VGN...

GTG

InCDS
Overlapping
sORF
NMD

3T3, Brain, R1E,
B_cell, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse

746845

159

CTG...

LGR...

CTG

Overlapping
sORF
Upstream

3T3, MEF, Neutrophil,
NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq		5	sORFs_org_Mouse

964438

ACG...

TAV...

ACG

NMD
sORF
Upstream

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

107088

CTG...

LQT...

CTG

InCDS
Overlapping
sORF
NMD

B_cell, Brain, Liver,
MEF, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	moderate	3	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

123813

141

ATG...

MQK...

ATG

Alternative
Overlapping
sORF
Upstream

B_cell, BMDC, Brain,
E14, Glioma, Liver,
MEF, MESC, Neutrophil,
NSC, R1E, Spleen_B_cell,
v6-5,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		15	sORFs_org_Mouse Johnstone2016
3048185	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

94515

ATG...

MNQ...

ATG

Alternative
Downstream
NMD
sORF

Brain, MEF, Glioma,
Liver, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq	moderate	1	Johnstone2016

102868

CTG...

LLL...

CTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, Brain, Spleen_B_cell,
E14, MEF, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	weak	7	sORFs_org_Mouse
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

116555

TTG...

LGR...

TTG

InCDS
Overlapping
sORF
NMD

3T3, Brain, BMDC,
MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
118501	ENSMUST00000152578	Dnajc5-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

104966

TTG...

LWP...

TTG

Alternative
InCDS
Overlapping
sORF
NMD

Brain, 3T3, E14,
MEF, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	weak	5	sORFs_org_Mouse

119328

ATG...

MTL...

ATG

sORF
Alternative
InCDS
Overlapping

R1E, B_cell, Brain,
MEF, Neutrophil, NSC,
v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
118501	ENSMUST00000152578	Dnajc5-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		7	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

97894

GTG...

VRR...

GTG

InCDS
NMD
Overlapping
sORF

Brain, MEF, Neutrophil,
B_cell, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse

497805

153

CTG...

LLR...

CTG

Alternative
sORF
Upstream
NMD

B_cell, Spleen_B_cell, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

43905

165

CTG...

LTD...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

Brain, Neutrophil, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

15630

CTG...

LTR...

CTG

InCDS
Overlapping
sORF
NMD

B_cell, Brain, Skin_tumor,
E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	moderate	4	sORFs_org_Mouse

112064

225

GTG...

VPV...

GTG

InCDS
NMD
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

736692

CTG...

LPP...

CTG

sORF
Upstream

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

93453

ATG...

MWR...

ATG

sORF
InCDS
Overlapping
NMD

BMDC, Brain, v6-5,
B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
118501	ENSMUST00000152578	Dnajc5-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

103067

CTG...

LLL...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

Brain, E14, MEF,
NSC, v6-5, 3T3,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	weak	7	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

93776

TTG...

LDW...

TTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, Brain, B_cell,
R1E, MEF, Neutrophil,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse
118501	ENSMUST00000152578	Dnajc5-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

412884

180

ACG...

TES...

ACG

Alternative
Overlapping
sORF
Upstream

C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

116224

CTG...

LLT...

CTG

Alternative
Downstream
NMD
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1207669

AAG...

KRS...

AAG

Alternative
sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

94743

CTG...

LLL...

CTG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, Brain, E14,
MEF, NSC, v6-5,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	weak	6	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

93494

ATG...

MIS...

ATG

Alternative
NMD
sORF
Upstream

Brain, Neutrophil, NSC,
B_cell, Glioma, Liver,
MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016

497621

144

CTG...

LSP...

CTG

Alternative
sORF
Upstream
NMD

B_cell, E14, Spleen_B_cell,
MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

100446

ATG...

MFL...

ATG

Alternative
InCDS
Overlapping
sORF
NMD

3T3, Brain, B_cell,
MEF, Neutrophil, NSC,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		6	sORFs_org_Mouse
118501	ENSMUST00000152578	Dnajc5-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

94962

CTG...

LIT...

CTG

InCDS
NMD
Overlapping
sORF

Brain, Liver, MEF,
v6-5, B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	moderate	5	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

120407

ATG...

MQP...

ATG

Alternative
InCDS
Overlapping
sORF

MEF, B_cell, Brain,
Neutrophil, NSC, v6-5,
3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		7	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
118501	ENSMUST00000152578	Dnajc5-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

119991

GTG...

VHL...

GTG

sORF
Upstream

Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse

730002

TTG...

LLP...

TTG

NMD
sORF
Upstream

3T3, BMDC, Neutrophil,
B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	moderate	3	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

742339

117

CTG...

LSP...

CTG

Alternative
sORF
Upstream

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

815103

183

GTG...

VSE...

GTG

Alternative
sORF
Upstream

B_cell, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

96145

264

CTG...

LFV...

CTG

Alternative
CDS
NMD
sORF

Brain, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

808649

210

GTG...

VSE...

GTG

Alternative
sORF
Upstream

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1053846

216

TTG...

LCC...

TTG

Alternative
CDS
NMD
sORF

Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

104974

ATG...

MQP...

ATG

Alternative
InCDS
Overlapping
sORF
NMD

B_cell, Brain, Neutrophil,
NSC, 3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
118501	ENSMUST00000152578	Dnajc5-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

122962

ATG...

MFL...

ATG

sORF
Alternative
InCDS
Overlapping

R1E, MEF, B_cell,
Brain, E14, Neutrophil,
NSC, Spleen_B_cell, v6-5,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
118501	ENSMUST00000152578	Dnajc5-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		9	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

744724

CTG...

LPT...

CTG

sORF
Upstream

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

95597

GTG...

VAG...

GTG

Alternative
Downstream
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

741338

TTG...

LLP...

TTG

sORF
Upstream

3T3, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse

1641555

GTG...

VVA...

GTG

Downstream
NMD
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

116301

CTG...

LLW...

CTG

Alternative
InCDS
Overlapping
sORF
NMD

B_cell, Spleen_B_cell, Brain,
E14, MEF, NSC,
3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	weak	4	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse

121828

126

CTG...

LLR...

CTG

Alternative
sORF
Upstream

3T3, Brain, MEF,
Neutrophil, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse

97183

CTG...

LLL...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

Brain, E14, MEF,
NSC, B_cell, Spleen_B_cell,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	weak	4	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

107299

CTG...

LKT...

CTG

InCDS
Overlapping
sORF
NMD

Brain, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

814105

189

GTG...

VPV...

GTG

Alternative
sORF
Upstream

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

48383

246

CTG...

LKY...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

E14, MEF, Neutrophil,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse

124979

132

CTG...

LPL...

CTG

Alternative
sORF
Upstream

3T3, B_cell, Brain,
MEF, Neutrophil, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

101201

CTG...

LTP...

CTG

ncRNA
sORF
Alternative
Downstream
NMD

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
496385	ENSMUST00000141523	Dnajc5-205	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

744259

CTG...

LPR...

CTG

Alternative
sORF
Upstream

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

118500

135

CTG...

LTN...

CTG

sORF

3T3, B_cell, BMDC,
Brain, E14, MEF,
Neutrophil, NSC, R1E,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
118501	ENSMUST00000152578	Dnajc5-206	protein_coding	Ribo-seq		13	sORFs_org_Mouse

123390

TTG...

LDW...

TTG

sORF
Alternative
InCDS
Overlapping

R1E, 3T3, Brain,
B_cell, E14, MEF,
Neutrophil, NSC, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
118501	ENSMUST00000152578	Dnajc5-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		9	sORFs_org_Mouse
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

125193

CTG...

LPT...

CTG

sORF
Upstream

B_cell, Brain, E14,
MEF, Neutrophil, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		7	sORFs_org_Mouse

966963

279

GTG...

VRV...

GTG

Alternative
sORF
Upstream
NMD

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

103853

CTG...

LWE...

CTG

Alternative
InCDS
Overlapping
sORF
NMD

B_cell, Spleen_B_cell, 3T3,
Brain, E14, MEF,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	weak	4	sORFs_org_Mouse

47707

CTG...

LTA...

CTG

ncRNA
sORF
Alternative
Downstream
NMD

3T3, Brain, R1E,
Spleen_B_cell, E14, MEF,
Neutrophil, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
496385	ENSMUST00000141523	Dnajc5-205	processed_transcript	Ribo-seq		4	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	weak	5	sORFs_org_Mouse

116826

TTG...

LCD...

TTG

Downstream
NMD
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

969907

ACG...

TST...

ACG

sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
118501	ENSMUST00000152578	Dnajc5-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

965738

GTG...

VPT...

GTG

Alternative
NMD
sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

971875

ACG...

TES...

ACG

Alternative
sORF
Upstream

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse

112932

189

TTG...

LFV...

TTG

InCDS
NMD
Overlapping
sORF

Brain, v6-5, B_cell,
3T3, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
746846	ENSMUST00000108796	Dnajc5-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

743913

156

GTG...

VDR...

GTG

Alternative
Overlapping
sORF
Upstream

3T3, Brain, Liver,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

122674

GTG...

VDR...

GTG

Alternative
sORF
Upstream

B_cell, Brain, E14,
MEF, Neutrophil, NSC,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		8	sORFs_org_Mouse

811281

CTG...

LPR...

CTG

Alternative
NMD
sORF
Upstream

BMDC, Neutrophil, B_cell,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse

122926

300

GTG...

VRV...

GTG

Alternative
Overlapping
sORF
Upstream

3T3, B_cell, BMDC,
Brain, E14, MEF,
Neutrophil, NSC, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		10	sORFs_org_Mouse

47943

252

CTG...

LAL...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

Brain, E14, MEF,
Neutrophil, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		6	sORFs_org_Mouse

1641174

GTG...

VFV...

GTG

Downstream
NMD
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

47440

CTG...

LDK...

CTG

InCDS
NMD
Overlapping
sORF

Brain, E14, Liver,
MEF, Neutrophil, NSC,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		10	sORFs_org_Mouse

493268

159

CTG...

LPL...

CTG

Alternative
sORF
Upstream
NMD

B_cell, Spleen_B_cell, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
93777	ENSMUST00000108797	Dnajc5-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

808891

216

GTG...

VPV...

GTG

Alternative
sORF
Upstream

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
15631	ENSMUST00000072334	Dnajc5-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

46416

108

GTG...

VAE...

GTG

Alternative
InCDS
NMD
Overlapping
sORF

Neutrophil, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
43906	ENSMUST00000116365	Dnajc5-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

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