Gene NCBI:110826 | MetamORF

Gene

ID CARD

NCBI:110826

Aliases

0610009I16Rik
2810441H06Rik, ENSMUSG00000004610, Etfb
MGI:106098, NCBI:110826, OFF:Etfb

Chromosome

Transcripts

25 ORFs
7 known transcripts
42 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

841644

ENSMUST00000206286

Etfb-206

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
592613	30	CTG ...	LWP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF	Liver, R1E
531223	147	GTG ...	VVK ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	E14
596533	90	CTG ...	LQE ...	Ribo-seq	CTG		4	sORFs_org_Mouse	sORF	B_cell, Liver, MEF
530953	93	CTG ...	LLQ ...	Ribo-seq	CTG		4	sORFs_org_Mouse	sORF	B_cell, Liver, MEF
878552	39	ATG ...	MSL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	Liver
76874	72	GTG ...	VTA ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	sORF	B_cell

4904

ENSMUST00000155468

Etfb-203

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
879355	81	GTG ...	VGR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	Liver, MEF
224383	54	GTG ...	VET ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	ncRNA sORF	R1E
423992	129	CTG ...	LGV ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	ncRNA sORF	E14, R1E
535011	72	GTG ...	VWK ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	ncRNA sORF	R1E
531872	36	CTG ...	LVA ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	ncRNA sORF	R1E
534116	90	GTG ...	VEE ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	ncRNA sORF	R1E
223903	99	GTG ...	VIS ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	ncRNA sORF	R1E
535061	33	GTG ...	VAK ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	R1E
531223	147	GTG ...	VVK ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	ncRNA sORF	R1E
424500	123	GTG ...	VDL ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	ncRNA sORF	R1E
422404	117	CTG ...	LTS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	R1E
4903	51	ATA ...	IRR ...	Ribo-seq	ATA		15	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, BMDC, E14, Liver, MEF, Neutrophil, R1E, Skin_tumor, Spleen_B_cell, v6-5

589761

ENSMUST00000004729

Etfb-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
592613	30	CTG ...	LWP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
596533	90	CTG ...	LQE ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Liver
1067773	30	ATG ...	MMT ...	Ribo-seq	ATG	weak	1	Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
589760	84	CTG ...	LTR ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3
530953	93	CTG ...	LLQ ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Liver
598891	78	CTG ...	LKR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Liver, MEF

752703

ENSMUST00000206411

Etfb-207

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
752702	102	GTG ...	VAP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	B_cell
753860	114	TTG ...	LPS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	B_cell
878552	39	ATG ...	MSL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	v6-5
598891	78	CTG ...	LKR ...	Ribo-seq	CTG		3	sORFs_org_Mouse	sORF	MEF, Neutrophil

78199

ENSMUST00000143096

Etfb-202

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
535438	39	TTG ...	LKW ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Liver
424117	66	GTG ...	VCR ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	ncRNA sORF	Liver
878552	39	ATG ...	MSL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
424500	123	GTG ...	VDL ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
535011	72	GTG ...	VWK ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	ncRNA sORF	Liver
223903	99	GTG ...	VIS ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
422404	117	CTG ...	LTS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
531223	147	GTG ...	VVK ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
534116	90	GTG ...	VEE ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	ncRNA sORF	Liver
224383	54	GTG ...	VET ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	ncRNA sORF	Brain
78198	183	CTG ...	LEG ...	Ribo-seq	CTG		4	sORFs_org_Mouse	ncRNA sORF	Brain, Neutrophil, R1E, Testis
423992	129	CTG ...	LGV ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	ncRNA sORF	Liver

598892

ENSMUST00000205363

Etfb-204

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
598891	78	CTG ...	LKR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	3T3

530954

ENSMUST00000206196

Etfb-205

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
530953	93	CTG ...	LLQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Spleen_B_cell

ORFs

25 ORFs
7 known transcripts
42 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

592613

CTG...

LWP...

CTG

sORF
Alternative
InCDS
Overlapping
NMD

Liver, R1E, 3T3,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
841644	ENSMUST00000206286	Etfb-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse
589761	ENSMUST00000004729	Etfb-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

879355

GTG...

VGR...

GTG

ncRNA
sORF

Liver, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
4904	ENSMUST00000155468	Etfb-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

224383

GTG...

VET...

GTG

ncRNA
sORF
InCDS
NMD
Overlapping

R1E, BMDC, MEF,
Neutrophil, NSC, Spleen_B_cell,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
4904	ENSMUST00000155468	Etfb-203	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse
422405	ENSMUST00000203633	Gm45233-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
78199	ENSMUST00000143096	Etfb-202	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse

531872

CTG...

LVA...

CTG

InCDS
NMD
Overlapping
sORF
ncRNA

Spleen_B_cell, BMDC, E14,
Liver, MEF, Neutrophil,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
422405	ENSMUST00000203633	Gm45233-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		6	sORFs_org_Mouse
4904	ENSMUST00000155468	Etfb-203	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse

531223

147

GTG...

VVK...

GTG

sORF
InCDS
NMD
Overlapping
ncRNA

E14, Spleen_B_cell, R1E,
Brain, Liver, BMDC,
MEF, Neutrophil, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
841644	ENSMUST00000206286	Etfb-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
422405	ENSMUST00000203633	Gm45233-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
4904	ENSMUST00000155468	Etfb-203	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse
78199	ENSMUST00000143096	Etfb-202	processed_transcript	Ribo-seq	strong	2	sORFs_org_Mouse
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse

423992

129

CTG...

LGV...

CTG

ncRNA
sORF
InCDS
NMD
Overlapping

E14, R1E, BMDC,
MEF, Neutrophil, NSC,
Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
4904	ENSMUST00000155468	Etfb-203	processed_transcript	Ribo-seq	strong	2	sORFs_org_Mouse
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse
78199	ENSMUST00000143096	Etfb-202	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse
422405	ENSMUST00000203633	Gm45233-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

878552

ATG...

MSL...

ATG

Alternative
InCDS
NMD
Overlapping
sORF
ncRNA

BMDC, E14, Neutrophil,
Brain, Liver, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
78199	ENSMUST00000143096	Etfb-202	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
752703	ENSMUST00000206411	Etfb-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
841644	ENSMUST00000206286	Etfb-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

752702

102

GTG...

VAP...

GTG

sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
752703	ENSMUST00000206411	Etfb-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse

424500

123

GTG...

VDL...

GTG

InCDS
NMD
Overlapping
sORF
ncRNA

Spleen_B_cell, Brain, Liver,
BMDC, MEF, Neutrophil,
NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
422405	ENSMUST00000203633	Gm45233-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
78199	ENSMUST00000143096	Etfb-202	processed_transcript	Ribo-seq	strong	2	sORFs_org_Mouse
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse
4904	ENSMUST00000155468	Etfb-203	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse

535011

GTG...

VWK...

GTG

ncRNA
sORF
Alternative
InCDS
NMD
Overlapping

R1E, Spleen_B_cell, BMDC,
MEF, Neutrophil, NSC,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
4904	ENSMUST00000155468	Etfb-203	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
422405	ENSMUST00000203633	Gm45233-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
78199	ENSMUST00000143096	Etfb-202	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

535061

GTG...

VAK...

GTG

InCDS
NMD
Overlapping
sORF
ncRNA

Spleen_B_cell, BMDC, Liver,
MEF, Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
422405	ENSMUST00000203633	Gm45233-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse
4904	ENSMUST00000155468	Etfb-203	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

596533

CTG...

LQE...

CTG

Alternative
NMD
Overlapping
sORF
Upstream

MEF, v6-5, 3T3,
Liver, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
589761	ENSMUST00000004729	Etfb-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
841644	ENSMUST00000206286	Etfb-206	protein_coding	Ribo-seq		4	sORFs_org_Mouse

76874

GTG...

VTA...

GTG

Alternative
NMD
Overlapping
sORF
Upstream

BMDC, MEF, NSC,
Testis, v6-5, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		6	sORFs_org_Mouse
841644	ENSMUST00000206286	Etfb-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

535438

TTG...

LKW...

TTG

ncRNA
sORF
Alternative
InCDS
NMD
Overlapping

Liver, Spleen_B_cell, BMDC,
MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78199	ENSMUST00000143096	Etfb-202	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
422405	ENSMUST00000203633	Gm45233-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

530953

CTG...

LLQ...

CTG

Alternative
NMD
Overlapping
sORF
Upstream

MEF, v6-5, 3T3,
Liver, Spleen_B_cell, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
589761	ENSMUST00000004729	Etfb-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
530954	ENSMUST00000206196	Etfb-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
841644	ENSMUST00000206286	Etfb-206	protein_coding	Ribo-seq		4	sORFs_org_Mouse

424117

GTG...

VCR...

GTG

ncRNA
sORF
Alternative
InCDS
NMD
Overlapping

Liver, BMDC, E14,
MEF, Neutrophil, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78199	ENSMUST00000143096	Etfb-202	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
422405	ENSMUST00000203633	Gm45233-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

422404

117

CTG...

LTS...

CTG

InCDS
NMD
Overlapping
sORF
ncRNA

BMDC, MEF, Neutrophil,
NSC, Brain, Liver,
Spleen_B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
78199	ENSMUST00000143096	Etfb-202	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse
422405	ENSMUST00000203633	Gm45233-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
4904	ENSMUST00000155468	Etfb-203	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

753860

114

TTG...

LPS...

TTG

sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
752703	ENSMUST00000206411	Etfb-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1067773

ATG...

MMT...

ATG

InCDS
Overlapping
sORF
NMD

Glioma, Liver, MEF,
MESC, BMDC, Neutrophil,
NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
589761	ENSMUST00000004729	Etfb-201	protein_coding	Ribo-seq	weak	1	Johnstone2016
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq	weak	5	sORFs_org_Mouse

598891

CTG...

LKR...

CTG

sORF
InCDS
Overlapping

3T3, MEF, Neutrophil,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
598892	ENSMUST00000205363	Etfb-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
752703	ENSMUST00000206411	Etfb-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
589761	ENSMUST00000004729	Etfb-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

589760

CTG...

LTR...

CTG

Alternative
Overlapping
sORF
Upstream

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
589761	ENSMUST00000004729	Etfb-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

223903

GTG...

VIS...

GTG

InCDS
NMD
Overlapping
sORF
ncRNA

BMDC, MEF, Neutrophil,
Brain, Liver, R1E,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
78199	ENSMUST00000143096	Etfb-202	processed_transcript	Ribo-seq	weak	2	sORFs_org_Mouse
4904	ENSMUST00000155468	Etfb-203	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
422405	ENSMUST00000203633	Gm45233-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

534116

GTG...

VEE...

GTG

InCDS
NMD
Overlapping
sORF
ncRNA

Spleen_B_cell, R1E, Liver,
BMDC, MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
422405	ENSMUST00000203633	Gm45233-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
4904	ENSMUST00000155468	Etfb-203	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse
78199	ENSMUST00000143096	Etfb-202	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse
72250	ENSMUST00000204680	Gm45233-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

78198

183

CTG...

LEG...

CTG

ncRNA
sORF

Brain, Neutrophil, R1E,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
78199	ENSMUST00000143096	Etfb-202	processed_transcript	Ribo-seq		4	sORFs_org_Mouse

4903

ATA...

IRR...

ATA

ncRNA
sORF

3T3, B_cell, BMDC,
E14, Liver, MEF,
Neutrophil, R1E, Skin_tumor,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
4904	ENSMUST00000155468	Etfb-203	processed_transcript	Ribo-seq		15	sORFs_org_Mouse

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