Gene AC018523.2 | MetamORF

Gene

ID CARD

AC018523.2

Aliases

AC018523.2

Chromosome

Transcripts

78 ORFs
1 known transcript
78 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

2743

ENST00000555531

AC018523.2-201

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
406866	156	TAT ...	YDD ...	Ribo-seq	TAT		1	sORFs_org_Human	Alternative Downstream NMD sORF	HCT116
101181	102	ATG ...	MMM ...	Ribo-seq	ATG		8	sORFs_org_Human	Downstream NMD sORF	Flp-In_T-REx-293, HAP1, HEK293, HeLa, hES, MM1S
283495	69	CTG ...	LLS ...	Ribo-seq	CTG		7	sORFs_org_Human	Alternative Downstream NMD sORF	HEK293, HeLa, LCL, MM1S
3200038	54	ATT ...	IPD ...	Ribo-seq	ATT	weak	1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HEK293
1316155	120	CTG ...	LEA ...	Ribo-seq	CTG		2	sORFs_org_Human	Alternative NMD Overlapping sORF Upstream	HEK293, HeLa
2755	30	TTG ...	LVS ...	Ribo-seq	TTG		18	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	BJ, Blood, HEK293, HEK293T, HeLa, hES, LCL, MDA-MB-231, MM1S, RPE-1, U2OS
904749	45	GGA ...	GDH ...	Ribo-seq	GGA		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Jurkat
101204	42	CTG ...	LML ...	Ribo-seq	CTG		5	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HEK293, HeLa, LCL, MM1S
1316157	123	TTG ...	LLE ...	Ribo-seq	TTG		2	sORFs_org_Human	Alternative NMD Overlapping sORF Upstream	HEK293, HeLa
2742	132	TTG ...	LVK ...	Ribo-seq	TTG		21	sORFs_org_Human	Downstream NMD sORF	BJ, Blood, Flp-In_T-REx-293, HAP1, HEK293, HeLa, hES, HFF, LCL, MM1S, RPE-1, U2OS
904771	297	AAA ...	KSK ...	Ribo-seq	AAA		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Jurkat
101215	174	TTG ...	LSL ...	Ribo-seq	TTG		2	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HEK293, HeLa
406885	267	TTG ...	LKV ...	Ribo-seq	TTG		2	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HCT116, Jurkat
406868	129	GTA ...	VKT ...	Ribo-seq	GTA		2	sORFs_org_Human	Downstream NMD sORF	HCT116, Jurkat
3015976	33	CTG ...	LCM ...	Ribo-seq	CTG		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	MM1S
283520	30	ATG ...	MMS ...	Ribo-seq	ATG		30	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	BJ, Blood, Brain, Flp-In_T-REx-293, HAP1, HCT116, HEK293, HEK293T, HeLa, hES, HFF, Jurkat, LCL, loayza_puch_2016, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS
406878	63	TCT ...	SQL ...	Ribo-seq	TCT		2	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HCT116, Jurkat
904737	54	TCC ...	SCR ...	Ribo-seq	TCC		2	sORFs_org_Human	Alternative Downstream NMD sORF	HEK293, Jurkat
101195	141	TTG ...	LTA ...	Ribo-seq	TTG		4	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HEK293, HeLa, MM1S
101183	105	ATG ...	MMM ...	Ribo-seq	ATG		9	sORFs_org_Human	Downstream NMD sORF	Flp-In_T-REx-293, HAP1, HEK293, HeLa, hES, MM1S
2779	141	ATG ...	MSL ...	Ribo-seq	ATG		19	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Blood, HEK293, HeLa, hES, HFF, LCL, MM1S, RPE-1, THP-1
101202	39	ATG ...	MLD ...	Ribo-seq	ATG		4	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HEK293, HeLa, LCL, MM1S
2311788	45	GTG ...	VIQ ...	Ribo-seq	GTG		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	MDA-MB-231
101179	99	ATG ...	MMM ...	Ribo-seq	ATG		9	sORFs_org_Human	Downstream NMD sORF	Flp-In_T-REx-293, HAP1, HEK293, HeLa, hES, MM1S
101185	171	TTG ...	LEF ...	Ribo-seq	TTG		8	sORFs_org_Human	Alternative Downstream NMD sORF	guo_2014, HEK293, HeLa
2753	39	TTG ...	LER ...	Ribo-seq	TTG		32	sORFs_org_Human	InCDS NMD Overlapping sORF	BJ, Blood, Brain, Flp-In_T-REx-293, guo_2014, HAP1, HEK293, HeLa, hES, HFF, LCL, loayza_puch_2016, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS
406887	282	GCA ...	AVL ...	Ribo-seq	GCA		3	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HCT116, HEK293, Jurkat
904765	105	CTC ...	LIR ...	Ribo-seq	CTC		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Jurkat
406873	51	GCT ...	ART ...	Ribo-seq	GCT		2	sORFs_org_Human	InCDS NMD Overlapping sORF	HCT116, Jurkat
406883	63	GTT ...	VDN ...	Ribo-seq	GTT		3	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HCT116, HEK293, Jurkat
904747	33	ATA ...	IWC ...	Ribo-seq	ATA		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Jurkat
904758	30	CTT ...	LTA ...	Ribo-seq	CTT		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Jurkat
101199	153	CTG ...	LLT ...	Ribo-seq	CTG		8	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HEK293, HeLa, MM1S
2777	111	TTG ...	LQL ...	Ribo-seq	TTG		23	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Blood, Brain, HAP1, HEK293, HeLa, hES, HFF, LCL, MM1S, RPE-1, THP-1, U2OS
904767	99	TCA ...	SEL ...	Ribo-seq	TCA		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Jurkat
2767	30	GTG ...	VFG ...	Ribo-seq	GTG	moderate	19	sORFs_org_Human	InCDS NMD Overlapping sORF	Blood, Flp-In_T-REx-293, HAP1, HEK293, HEK293T, HeLa, LCL, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS
1723559	42	ATG ...	MSS ...	Ribo-seq	ATG		3	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Blood, MM1S, RPE-1
2765	117	TTG ...	LDS ...	Ribo-seq	TTG		7	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Brain, HEK293, HeLa
2757	33	GTG ...	VLV ...	Ribo-seq	GTG		13	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Blood, HEK293, HeLa, hES, LCL, MDA-MB-231, THP-1
2773	81	TTG ...	LTT ...	Ribo-seq	TTG		25	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	BJ, Blood, Flp-In_T-REx-293, HAP1, HEK293, HEK293T, HeLa, hES, HFF, LCL, MM1S, RPE-1, THP-1
1819607	135	CTG ...	LMT ...	Ribo-seq	CTG		1	sORFs_org_Human	Downstream NMD sORF	HeLa
2759	36	ATG ...	MVL ...	Ribo-seq	ATG		8	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HEK293, HeLa, hES, MDA-MB-231, RPE-1
3200034	45	ACA ...	TGP ...	Ribo-seq	ACA		1	sORFs_org_Human	Alternative Downstream NMD sORF	HEK293
904745	180	GCC ...	ALT ...	Ribo-seq	GCC		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Jurkat
904735	195	TCC ...	SIG ...	Ribo-seq	TCC		1	sORFs_org_Human	Alternative Downstream NMD sORF	Jurkat
1439449	87	CTG ...	LPV ...	Ribo-seq	CTG		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HeLa
2745	135	TTG ...	LLV ...	Ribo-seq	TTG		24	sORFs_org_Human	Downstream NMD sORF	BJ, Blood, Flp-In_T-REx-293, HAP1, HCT116, HEK293, HeLa, hES, HFF, Jurkat, LCL, MM1S, RPE-1, U2OS
904743	165	AAA ...	KPV ...	Ribo-seq	AAA		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Jurkat
1439440	141	GTG ...	VSP ...	Ribo-seq	GTG		2	sORFs_org_Human	Alternative Downstream NMD sORF	HeLa
1819605	132	ATG ...	MTI ...	Ribo-seq	ATG		1	sORFs_org_Human	Downstream NMD sORF	HeLa
101206	45	CTG ...	LLM ...	Ribo-seq	CTG		9	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HCT116, HEK293, HeLa, Jurkat, LCL, MM1S
2749	150	ATG ...	MFP ...	Ribo-seq	ATG		24	sORFs_org_Human	Downstream NMD sORF	BJ, Blood, Flp-In_T-REx-293, HAP1, HEK293, HeLa, hES, HFF, LCL, MM1S, RPE-1, U2OS
904741	60	TCC ...	SQS ...	Ribo-seq	TCC		1	sORFs_org_Human	InCDS NMD Overlapping sORF	Jurkat
101177	96	ATG ...	MMC ...	Ribo-seq	ATG		8	sORFs_org_Human	Downstream NMD sORF	Flp-In_T-REx-293, HAP1, HEK293, hES, MM1S
2771	69	TTG ...	LVS ...	Ribo-seq	TTG		25	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Flp-In_T-REx-293, guo_2014, HCT116, HEK293, HEK293T, HeLa, hES, HFF, Jurkat, LCL, MM1S, RPE-1, THP-1, U2OS
2775	84	ATG ...	MLT ...	Ribo-seq	ATG		25	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	BJ, Blood, Flp-In_T-REx-293, HAP1, HEK293, HEK293T, HeLa, hES, HFF, LCL, MM1S, RPE-1, THP-1
3015978	36	GTG ...	VLC ...	Ribo-seq	GTG		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	MM1S
527120	69	CTG ...	LQS ...	Ribo-seq	CTG	weak	8	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Blood, guo_2014, HeLa, loayza_puch_2016, MDA-MB-231, Monocyte, U2OS
283522	36	ATG ...	MTM ...	Ribo-seq	ATG		32	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	BJ, Blood, Brain, Flp-In_T-REx-293, HAP1, HCT116, HEK293, HEK293T, HeLa, hES, HFF, Jurkat, LCL, loayza_puch_2016, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS
904731	114	TTA ...	LQS ...	Ribo-seq	TTA		2	sORFs_org_Human	Downstream NMD sORF	HEK293, Jurkat
101191	207	ATG ...	MYF ...	Ribo-seq	ATG		3	sORFs_org_Human	Downstream NMD sORF	HEK293
406871	63	AGA ...	RDA ...	Ribo-seq	AGA		2	sORFs_org_Human	Alternative Downstream NMD sORF	HCT116, Jurkat
904762	57	AAC ...	NHI ...	Ribo-seq	AAC		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Jurkat
904755	66	TAC ...	YQH ...	Ribo-seq	TAC		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Jurkat
101175	93	ATG ...	MCL ...	Ribo-seq	ATG		7	sORFs_org_Human	Downstream NMD sORF	Flp-In_T-REx-293, HAP1, HEK293, hES
2903798	120	TTG ...	LEP ...	Ribo-seq	TTG		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HeLa
2769	57	TTG ...	LRG ...	Ribo-seq	TTG		12	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HEK293, HEK293T, HeLa, hES, HFF, LCL, MM1S, THP-1
904751	45	TGG ...	WPE ...	Ribo-seq	TGG		3	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HeLa, Jurkat, THP-1
2311792	90	GTG ...	VPR ...	Ribo-seq	GTG		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	MDA-MB-231
2747	141	TTG ...	LEL ...	Ribo-seq	TTG		21	sORFs_org_Human	Downstream NMD sORF	BJ, Blood, Flp-In_T-REx-293, HAP1, HEK293, HeLa, hES, HFF, LCL, MM1S, RPE-1, U2OS
904753	54	GAT ...	DMA ...	Ribo-seq	GAT		2	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	HEK293, Jurkat
2311790	78	ATG ...	MRA ...	Ribo-seq	ATG		1	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	MDA-MB-231
1723561	30	ATG ...	MTS ...	Ribo-seq	ATG		3	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Blood, hES, MDA-MB-231
2763	45	TTG ...	LYS ...	Ribo-seq	TTG	moderate	11	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	Blood, HEK293, HeLa, hES, HFF, LCL, MDA-MB-231
406875	90	CCA ...	PTQ ...	Ribo-seq	CCA		1	sORFs_org_Human	InCDS NMD Overlapping sORF	HCT116
2751	84	CTG ...	LRA ...	Ribo-seq	CTG		28	sORFs_org_Human	Alternative Downstream NMD sORF	BJ, Brain, Flp-In_T-REx-293, guo_2014, HAP1, HEK293, HEK293T, HeLa, hES, HFF, LCL, loayza_puch_2016, MM1S, RPE-1, THP-1
2761	51	ATG ...	MAG ...	Ribo-seq	ATG		21	sORFs_org_Human	Alternative InCDS NMD Overlapping sORF	BJ, Blood, Brain, HAP1, HEK293, HeLa, hES, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS
1819609	42	ATG ...	MYY ...	Ribo-seq	ATG		1	sORFs_org_Human	Alternative Downstream NMD sORF	HeLa

ORFs

78 ORFs
1 known transcript
78 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

406866

156

TAT...

YDD...

TAT

Alternative
Downstream
NMD
sORF

HCT116

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

101181

102

ATG...

MMM...

ATG

Downstream
NMD
sORF

Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, MM1S

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		8	sORFs_org_Human

283495

CTG...

LLS...

CTG

Alternative
Downstream
NMD
sORF

HEK293, HeLa, LCL,
MM1S

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		7	sORFs_org_Human

3200038

ATT...

IPD...

ATT

Alternative
InCDS
NMD
Overlapping
sORF

HEK293

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Human

1316155

120

CTG...

LEA...

CTG

Alternative
NMD
Overlapping
sORF
Upstream

HEK293, HeLa

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Human

2755

TTG...

LVS...

TTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

BJ, Blood, HEK293,
HEK293T, HeLa, hES,
LCL, MDA-MB-231, MM1S,
RPE-1, U2OS

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		18	sORFs_org_Human
3182977	ENST00000531023	PSMA1-210	retained_intron	Ribo-seq		1	sORFs_org_Human

1819609

ATG...

MYY...

ATG

Alternative
Downstream
sORF
NMD

Brain_tumor, HEK293, HeLa,
HFF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
483473	ENST00000396394	PSMA1-201	protein_coding	Ribo-seq	weak	1	Johnstone2016
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

904749

GGA...

GDH...

GGA

Alternative
InCDS
NMD
Overlapping
sORF

Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

101204

CTG...

LML...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

HEK293, HeLa, LCL,
MM1S

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Human

1316157

123

TTG...

LLE...

TTG

Alternative
NMD
Overlapping
sORF
Upstream

HEK293, HeLa

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Human

2742

132

TTG...

LVK...

TTG

Downstream
NMD
sORF

BJ, Blood, Flp-In_T-REx-293,
HAP1, HEK293, HeLa,
hES, HFF, LCL,
MM1S, RPE-1, U2OS

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		21	sORFs_org_Human

904771

297

AAA...

KSK...

AAA

Alternative
InCDS
NMD
Overlapping
sORF

Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

101215

174

TTG...

LSL...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

HEK293, HeLa

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Human

406885

267

TTG...

LKV...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

HCT116, Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Human

406868

129

GTA...

VKT...

GTA

Downstream
NMD
sORF

HCT116, Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Human

3015976

CTG...

LCM...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

MM1S

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

283520

ATG...

MMS...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HCT116,
HEK293, HEK293T, HeLa,
hES, HFF, Jurkat,
LCL, loayza_puch_2016, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		30	sORFs_org_Human

406878

TCT...

SQL...

TCT

Alternative
InCDS
NMD
Overlapping
sORF

HCT116, Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Human

904737

TCC...

SCR...

TCC

Alternative
Downstream
NMD
sORF

HEK293, Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Human

101195

141

TTG...

LTA...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

HEK293, HeLa, MM1S

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Human

101183

105

ATG...

MMM...

ATG

Downstream
NMD
sORF

Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, MM1S

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		9	sORFs_org_Human

2779

141

ATG...

MSL...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

Blood, HEK293, HeLa,
hES, HFF, LCL,
MM1S, RPE-1, THP-1

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		19	sORFs_org_Human

101202

ATG...

MLD...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

HEK293, HeLa, LCL,
MM1S

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Human

2311788

GTG...

VIQ...

GTG

Alternative
InCDS
NMD
Overlapping
sORF

MDA-MB-231

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

101179

ATG...

MMM...

ATG

Downstream
NMD
sORF

Flp-In_T-REx-293, HAP1, HEK293,
HeLa, hES, MM1S

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		9	sORFs_org_Human

101185

171

TTG...

LEF...

TTG

Alternative
Downstream
NMD
sORF

guo_2014, HEK293, HeLa

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		8	sORFs_org_Human

2753

TTG...

LER...

TTG

InCDS
NMD
Overlapping
sORF

BJ, Blood, Brain,
Flp-In_T-REx-293, guo_2014, HAP1,
HEK293, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MDA-MB-231, MM1S, RPE-1,
THP-1, U2OS

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		32	sORFs_org_Human

406887

282

GCA...

AVL...

GCA

Alternative
InCDS
NMD
Overlapping
sORF

HCT116, HEK293, Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Human

904765

105

CTC...

LIR...

CTC

Alternative
InCDS
NMD
Overlapping
sORF

Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

406873

GCT...

ART...

GCT

InCDS
NMD
Overlapping
sORF

HCT116, Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Human

406883

GTT...

VDN...

GTT

Alternative
InCDS
NMD
Overlapping
sORF

HCT116, HEK293, Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Human

904747

ATA...

IWC...

ATA

Alternative
InCDS
NMD
Overlapping
sORF

Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

904758

CTT...

LTA...

CTT

Alternative
InCDS
NMD
Overlapping
sORF

Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

101199

153

CTG...

LLT...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

HEK293, HeLa, MM1S

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		8	sORFs_org_Human

2777

111

TTG...

LQL...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

Blood, Brain, HAP1,
HEK293, HeLa, hES,
HFF, LCL, MM1S,
RPE-1, THP-1, U2OS

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		23	sORFs_org_Human

904767

TCA...

SEL...

TCA

Alternative
InCDS
NMD
Overlapping
sORF

Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

2767

GTG...

VFG...

GTG

InCDS
NMD
Overlapping
sORF

Blood, Flp-In_T-REx-293, HAP1,
HEK293, HEK293T, HeLa,
LCL, MDA-MB-231, MM1S,
RPE-1, THP-1, U2OS

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq	moderate	19	sORFs_org_Human

1723559

ATG...

MSS...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

Blood, MM1S, RPE-1

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Human

2765

117

TTG...

LDS...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

Brain, HEK293, HeLa

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		7	sORFs_org_Human

2757

GTG...

VLV...

GTG

Alternative
InCDS
NMD
Overlapping
sORF

Blood, HEK293, HeLa,
hES, LCL, MDA-MB-231,
THP-1

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		13	sORFs_org_Human

1819605

132

ATG...

MTI...

ATG

Downstream
sORF
NMD

Brain_tumor, HEK293, HeLa,
HFF,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
483473	ENST00000396394	PSMA1-201	protein_coding	Ribo-seq	weak	1	Johnstone2016
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human
4845560	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

2773

TTG...

LTT...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

BJ, Blood, Flp-In_T-REx-293,
HAP1, HEK293, HEK293T,
HeLa, hES, HFF,
LCL, MM1S, RPE-1,
THP-1

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		25	sORFs_org_Human

1819607

135

CTG...

LMT...

CTG

Downstream
NMD
sORF

HeLa

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

2759

ATG...

MVL...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

HEK293, HeLa, hES,
MDA-MB-231, RPE-1

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		8	sORFs_org_Human

3200034

ACA...

TGP...

ACA

Alternative
Downstream
NMD
sORF

HEK293

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

904745

180

GCC...

ALT...

GCC

Alternative
InCDS
NMD
Overlapping
sORF

Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

904735

195

TCC...

SIG...

TCC

Alternative
Downstream
NMD
sORF

Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

1439449

CTG...

LPV...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

HeLa

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

2745

135

TTG...

LLV...

TTG

Downstream
NMD
sORF

BJ, Blood, Flp-In_T-REx-293,
HAP1, HCT116, HEK293,
HeLa, hES, HFF,
Jurkat, LCL, MM1S,
RPE-1, U2OS

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		24	sORFs_org_Human

904743

165

AAA...

KPV...

AAA

Alternative
InCDS
NMD
Overlapping
sORF

Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

1439440

141

GTG...

VSP...

GTG

Alternative
Downstream
NMD
sORF

HeLa

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Human

101206

CTG...

LLM...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

HCT116, HEK293, HeLa,
Jurkat, LCL, MM1S

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		9	sORFs_org_Human

2749

150

ATG...

MFP...

ATG

Downstream
NMD
sORF

BJ, Blood, Flp-In_T-REx-293,
HAP1, HEK293, HeLa,
hES, HFF, LCL,
MM1S, RPE-1, U2OS

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		24	sORFs_org_Human

904741

TCC...

SQS...

TCC

InCDS
NMD
Overlapping
sORF

Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

101177

ATG...

MMC...

ATG

Downstream
NMD
sORF

Flp-In_T-REx-293, HAP1, HEK293,
hES, MM1S

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		8	sORFs_org_Human

2771

TTG...

LVS...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

Flp-In_T-REx-293, guo_2014, HCT116,
HEK293, HEK293T, HeLa,
hES, HFF, Jurkat,
LCL, MM1S, RPE-1,
THP-1, U2OS

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		25	sORFs_org_Human

2775

ATG...

MLT...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

BJ, Blood, Flp-In_T-REx-293,
HAP1, HEK293, HEK293T,
HeLa, hES, HFF,
LCL, MM1S, RPE-1,
THP-1

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		25	sORFs_org_Human

3015978

GTG...

VLC...

GTG

Alternative
InCDS
NMD
Overlapping
sORF

MM1S

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

527120

CTG...

LQS...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

Blood, guo_2014, HeLa,
loayza_puch_2016, MDA-MB-231, Monocyte,
U2OS

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq	weak	8	sORFs_org_Human

283522

ATG...

MTM...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

BJ, Blood, Brain,
Flp-In_T-REx-293, HAP1, HCT116,
HEK293, HEK293T, HeLa,
hES, HFF, Jurkat,
LCL, loayza_puch_2016, MDA-MB-231,
MM1S, RPE-1, THP-1,
U2OS

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		32	sORFs_org_Human

904731

114

TTA...

LQS...

TTA

Downstream
NMD
sORF

HEK293, Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Human

101191

207

ATG...

MYF...

ATG

Downstream
NMD
sORF

HEK293

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Human

406871

AGA...

RDA...

AGA

Alternative
Downstream
NMD
sORF

HCT116, Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Human

904762

AAC...

NHI...

AAC

Alternative
InCDS
NMD
Overlapping
sORF

Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

904755

TAC...

YQH...

TAC

Alternative
InCDS
NMD
Overlapping
sORF

Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

101175

ATG...

MCL...

ATG

Downstream
NMD
sORF

Flp-In_T-REx-293, HAP1, HEK293,
hES

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		7	sORFs_org_Human

2903798

120

TTG...

LEP...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

HeLa

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

2769

TTG...

LRG...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

HEK293, HEK293T, HeLa,
hES, HFF, LCL,
MM1S, THP-1

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		12	sORFs_org_Human

904751

TGG...

WPE...

TGG

Alternative
InCDS
NMD
Overlapping
sORF

HeLa, Jurkat, THP-1

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Human

2311792

GTG...

VPR...

GTG

Alternative
InCDS
NMD
Overlapping
sORF

MDA-MB-231

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

2747

141

TTG...

LEL...

TTG

Downstream
NMD
sORF

BJ, Blood, Flp-In_T-REx-293,
HAP1, HEK293, HeLa,
hES, HFF, LCL,
MM1S, RPE-1, U2OS

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		21	sORFs_org_Human

904753

GAT...

DMA...

GAT

Alternative
InCDS
NMD
Overlapping
sORF

HEK293, Jurkat

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Human

2311790

ATG...

MRA...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

MDA-MB-231

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

1723561

ATG...

MTS...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

Blood, hES, MDA-MB-231

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Human

2763

TTG...

LYS...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

Blood, HEK293, HeLa,
hES, HFF, LCL,
MDA-MB-231

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq	moderate	11	sORFs_org_Human

406875

CCA...

PTQ...

CCA

InCDS
NMD
Overlapping
sORF

HCT116

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Human

2751

CTG...

LRA...

CTG

Alternative
Downstream
NMD
sORF

BJ, Brain, Flp-In_T-REx-293,
guo_2014, HAP1, HEK293,
HEK293T, HeLa, hES,
HFF, LCL, loayza_puch_2016,
MM1S, RPE-1, THP-1

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		28	sORFs_org_Human

2761

ATG...

MAG...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

BJ, Blood, Brain,
HAP1, HEK293, HeLa,
hES, MDA-MB-231, MM1S,
RPE-1, THP-1, U2OS

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2743	ENST00000555531	AC018523.2-201	nonsense_mediated_decay	Ribo-seq		21	sORFs_org_Human

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