Metam
ORF

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Result of the search

Transcript

Research

DataBase

mmusculus

Provided transcript ID

Pabpn1-208

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript
name

The transcript name (e.g. MDK-202).

Strand

The strand of the transcript (+ or -)

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Gene
ID

The gene ID. Usually the HGNC ID for H. sapiens genes and the NCBI ID for M. musculus genes.

Gene aliases

A comma-separated list of symbols, IDs and/or aliases known for the gene.

Start-end positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and end of the transcript (in a 1-based system).

CDS start-stop positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the main (canonical) coding sequence of the transcript (i.e. the CDS, in a 1-based system). These values may only exist for coding transcripts.

1043167 ENSMUST00000172557 Pabpn1-208 + protein_coding NCBI:54196 ENSMUSG00000022194, MGI:1859158, mPABII,
NCBI:54196, OFF:Pabpn1, PAB2,
Pabp3, Pabpn1
54894618-54898134 54894881- 54898056
2612989 ENSMUST00000172557 Pabpn1-208 + protein_coding UNKNOWN_GENE_ENSMUSG00000022194_chr14 UNKNOWN_GENE_ENSMUSG00000022194_chr14 54894618-54898134 54894881- 54898056