Transcript 4066 | MetamORF

Transcript

ID CARD

MetamORF ID

4066

ENSMUST00000033283

Name

Rrm1-201

Strand

Biotype

protein_coding

Start-end positions

102441695-102469771

CDS Start-stop positions

102442025-102468483

CDS Relative positions

Sequences

Transcript sequence

TCA ...

Genome browsers

UCSC

Gene

NCBI:20133

Aliases

ENSMUSG00000030978,
MGI:98180, NCBI:20133, OFF:Rrm1,
RnrM1, Rrm1

Chr 7

ORFs

122 ORFs

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF lenght The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
912391	72	ATA ...	IMS ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
532234	66	ATG ...	MLL ...	Ribo-seq	ATG		15	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, E14, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
534338	72	ATG ...	MSH ...	Ribo-seq	ATG	weak	8	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	E14, Glioma, Liver, MEF, MESC, R1E, Spleen_B_cell, v6-5
425783	93	ATG ...	MSV ...	Ribo-seq	ATG		9	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, Glioma, Liver, MEF, MESC, Spleen_B_cell, v6-5
4272	45	TTG ...	LRN ...	Ribo-seq	TTG	moderate	8	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, R1E, Spleen_B_cell, v6-5
599909	66	ATG ...	MWI ...	Ribo-seq	ATG		7	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, Glioma, Liver, MEF, MESC, v6-5
534567	39	TTG ...	LDP ...	Ribo-seq	TTG	strong	8	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, E14, MEF, NSC, R1E, Spleen_B_cell, v6-5
532553	30	CTG ...	LSG ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
1256603	144	AAG ...	KLS ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
600690	111	CTG ...	LQL ...	Ribo-seq	CTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, R1E, v6-5
1258237	69	ACG ...	TAD ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
601761	84	CTG ...	LRS ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14
426640	84	CTG ...	LVW ...	Ribo-seq	CTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, MEF, Spleen_B_cell, v6-5
590353	114	CTG ...	LQL ...	Ribo-seq	CTG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, NSC, R1E, v6-5
1257049	33	ATC ...	IGP ...	Ribo-seq	ATC	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
532970	63	CTG ...	LSL ...	Ribo-seq	CTG	weak	7	sORFs_org_Mouse	Alternative sORF Upstream	MEF, Neutrophil, Spleen_B_cell, v6-5
1259175	60	ATC ...	IKV ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
532751	60	TTG ...	LSL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF
74446	99	CTG ...	LLQ ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Testis
531077	237	CTG ...	LHV ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, MEF, Neutrophil, Spleen_B_cell, v6-5
78337	132	ATG ...	MAP ...	Ribo-seq	ATG		17	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	3T3, B_cell, BMDC, E14, Glioma, Liver, MEF, MESC, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
77316	78	ATG ...	MTC ...	Ribo-seq	ATG		14	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
912417	57	ATA ...	ISR ...	Ribo-seq	ATA	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, E14
1069881	45	TTG ...	LKP ...	Ribo-seq	TTG	weak	8	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, MEF, Neutrophil, R1E, v6-5
424666	54	TTG ...	LRS ...	Ribo-seq	TTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, Spleen_B_cell, v6-5
77520	114	ATG ...	MRD ...	Ribo-seq	ATG		12	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
1256791	129	AAG ...	KKI ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
600407	63	TTG ...	LLS ...	Ribo-seq	TTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, Neutrophil, v6-5
600783	117	TTG ...	LML ...	Ribo-seq	TTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, R1E, v6-5
532340	126	ATG ...	MPS ...	Ribo-seq	ATG	moderate	13	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, Glioma, Liver, MEF, MESC, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
76931	114	TTG ...	LPQ ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Testis
1103701	66	ATG ...	MPL ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, E14, v6-5
423480	30	CTG ...	LPL ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, Spleen_B_cell
1101627	30	ATG ...	MEP ...	Ribo-seq	ATG	strong	5	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC, v6-5
75685	63	TTG ...	LLL ...	Ribo-seq	TTG		12	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, MEF, NSC, R1E, Spleen_B_cell, Testis, v6-5
1318613	48	ATG ...	MLG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
535234	48	ATG ...	MAP ...	Ribo-seq	ATG		10	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, BMDC, E14, MEF, Neutrophil, R1E, Spleen_B_cell, v6-5
600712	72	ATG ...	MSP ...	Ribo-seq	ATG		9	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, Brain, E14, Glioma, Liver, MEF, MESC, Neutrophil, NSC, R1E, v6-5
76235	39	GTG ...	VSW ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, Testis, v6-5
595801	42	ATG ...	MTE ...	Ribo-seq	ATG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, R1E, v6-5
423794	33	ATG ...	MAI ...	Ribo-seq	ATG	moderate	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
599130	60	CTG ...	LSP ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, Neutrophil, v6-5
426326	75	CTG ...	LPL ...	Ribo-seq	CTG		11	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, R1E, Spleen_B_cell, v6-5
601226	114	ATG ...	MLQ ...	Ribo-seq	ATG		10	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, Glioma, Liver, MEF, MESC, R1E, v6-5
597644	30	TTG ...	LLF ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
592935	120	CTG ...	LVR ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	sORF Upstream	3T3, MEF, Neutrophil
598510	141	CTG ...	LWG ...	Ribo-seq	CTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, NSC, R1E, v6-5
591517	117	GTG ...	VRK ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	sORF Upstream	3T3, MEF, Neutrophil
589930	108	GTG ...	VLS ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	sORF Upstream	3T3, MEF, Neutrophil
1098902	87	CTG ...	LRS ...	Ribo-seq	CTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, E14, MEF, NSC, R1E, v6-5
1323181	42	CTG ...	LGP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
599662	51	TTG ...	LHA ...	Ribo-seq	TTG		8	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, E14, Neutrophil, NSC, v6-5
73280	78	ATG ...	MTC ...	Ribo-seq	ATG		15	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, E14, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
72900	90	CTG ...	LPR ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E, Testis
1256898	57	ATT ...	ILP ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
913044	60	CTG ...	LVW ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14, MEF, v6-5
1259852	96	AAG ...	KSE ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
598640	102	CTG ...	LEA ...	Ribo-seq	CTG		8	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, BMDC, E14, MEF, R1E, v6-5
77068	123	ATG ...	MKR ...	Ribo-seq	ATG		14	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, E14, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
1260364	48	ACG ...	TAN ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
533723	69	ATG ...	MSV ...	Ribo-seq	ATG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14, MEF, Neutrophil, Spleen_B_cell, v6-5
1259128	78	ATT ...	ILP ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
74649	30	TTG ...	LHF ...	Ribo-seq	TTG	weak	7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, MEF, R1E, Spleen_B_cell, Testis
423457	33	ATG ...	MDS ...	Ribo-seq	ATG		11	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
601082	105	TTG ...	LKP ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, v6-5
591639	144	CTG ...	LWG ...	Ribo-seq	CTG		11	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, Neutrophil, NSC, R1E, v6-5
916748	78	ATC ...	IRT ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
597715	120	TTG ...	LML ...	Ribo-seq	TTG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, NSC, R1E, v6-5
596105	39	ATG ...	MKR ...	Ribo-seq	ATG		5	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, MEF, Neutrophil, v6-5
1250907	51	ACG ...	TRS ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
534546	51	ATG ...	MTL ...	Ribo-seq	ATG	weak	8	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, MEF, R1E, Spleen_B_cell, v6-5
4163	78	GTG ...	VEC ...	Ribo-seq	GTG		12	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, E14, MEF, NSC, R1E, Skin_tumor, Spleen_B_cell, v6-5
425081	108	GTG ...	VGL ...	Ribo-seq	GTG		7	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, MEF, NSC, R1E, Spleen_B_cell, v6-5
599588	54	GTG ...	VET ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, v6-5
840278	48	CTG ...	LEA ...	Ribo-seq	CTG		4	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, E14, MEF, v6-5
916616	54	ATA ...	IPV ...	Ribo-seq	ATA		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
532806	30	CTG ...	LTM ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Neutrophil, NSC, Spleen_B_cell
422878	54	GTG ...	VGL ...	Ribo-seq	GTG		5	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, MEF, NSC, Spleen_B_cell, v6-5
425761	63	ATG ...	MTE ...	Ribo-seq	ATG		12	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, Glioma, Liver, MEF, MESC, R1E, Spleen_B_cell, v6-5
591431	105	CTG ...	LSI ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	sORF Upstream	3T3, MEF, Neutrophil
599922	42	ATG ...	MAP ...	Ribo-seq	ATG		6	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	3T3, B_cell, BMDC, E14, Glioma, Liver, MEF, MESC, Neutrophil
77578	63	TTG ...	LLL ...	Ribo-seq	TTG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, MEF, NSC, R1E, Testis, v6-5
73575	69	CTG ...	LLT ...	Ribo-seq	CTG		10	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC, E14, MEF, Neutrophil, R1E, Spleen_B_cell, Testis, v6-5
1258254	75	ACG ...	TRS ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
4065	93	GTG ...	VGN ...	Ribo-seq	GTG	moderate	9	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC, E14, MEF, Neutrophil, NSC, Skin_tumor, Spleen_B_cell, v6-5
1790579	30	GTG ...	VYR ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
1254934	198	ATT ...	IRL ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	E14
1253188	72	ACG ...	TPS ...	Ribo-seq	ACG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
77516	66	ATG ...	MLL ...	Ribo-seq	ATG		11	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, E14, MEF, NSC, R1E, Testis, v6-5
601838	93	CTG ...	LPR ...	Ribo-seq	CTG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, Neutrophil, NSC, R1E, v6-5
1100233	63	GTG ...	VVH ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5
1253410	39	ATC ...	ISS ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
425317	105	ATG ...	MAA ...	Ribo-seq	ATG		13	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, Glioma, Liver, MEF, MESC, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
916476	75	ATA ...	IMS ...	Ribo-seq	ATA		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
426136	81	TTG ...	LTK ...	Ribo-seq	TTG		14	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
590697	117	ATG ...	MLQ ...	Ribo-seq	ATG		13	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, Neutrophil, NSC, R1E, v6-5
601311	63	TTG ...	LSL ...	Ribo-seq	TTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, Neutrophil, NSC, R1E, v6-5
426071	45	ATG ...	MDS ...	Ribo-seq	ATG		14	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
532308	57	GTG ...	VGS ...	Ribo-seq	GTG	strong	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF, NSC, R1E, Spleen_B_cell
593108	108	TTG ...	LKP ...	Ribo-seq	TTG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, NSC, R1E, v6-5
592065	30	ATG ...	MRD ...	Ribo-seq	ATG		4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, MEF, Neutrophil, v6-5
1671478	42	CTG ...	LTV ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	sORF Upstream	MEF
592969	282	TTG ...	LKR ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, B_cell, MEF, Neutrophil, v6-5
600737	102	CTG ...	LLQ ...	Ribo-seq	CTG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, Neutrophil, NSC, R1E, v6-5
596549	54	CTG ...	LPL ...	Ribo-seq	CTG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, R1E, v6-5
591596	30	CTG ...	LLW ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, v6-5
599183	117	TTG ...	LPQ ...	Ribo-seq	TTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, Neutrophil, NSC, R1E, v6-5
1251182	60	ACG ...	TRS ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
423998	93	ATG ...	MAA ...	Ribo-seq	ATG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
426287	132	GTG ...	VEC ...	Ribo-seq	GTG		10	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14, MEF, NSC, R1E, Spleen_B_cell, v6-5
595903	33	TTG ...	LQF ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, R1E, v6-5
531291	42	ATG ...	MQQ ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC, Spleen_B_cell, v6-5
531376	57	CTG ...	LFS ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF, Spleen_B_cell, v6-5
1099629	30	GTG ...	VLS ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, v6-5
533123	69	ATG ...	MSP ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, MEF, R1E
1100696	69	ATG ...	MPL ...	Ribo-seq	ATG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, E14, MEF, v6-5
535159	69	TTG ...	LTK ...	Ribo-seq	TTG		11	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
1323344	45	ATG ...	MLG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
914520	72	ATT ...	IPV ...	Ribo-seq	ATT	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
1259217	126	AAG ...	KKI ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
588844	33	ATG ...	MTA ...	Ribo-seq	ATG	moderate	11	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, Glioma, Liver, MEF, MESC, Neutrophil, R1E, v6-5
532454	117	TTG ...	LSP ...	Ribo-seq	TTG	weak	10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, E14, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5

Export data