Transcript 90 | MetamORF

Transcript

ID CARD

MetamORF ID

ENSMUST00000027752

Name

Lamc1-201

Strand

Biotype

protein_coding

Start-end positions

153218922-153332786

CDS Start-stop positions

153221473-153332539

CDS Relative positions

Sequences

Transcript sequence

GGC ...

Genome browsers

UCSC

Gene

NCBI:226519

Aliases

ENSMUSG00000026478,
Lamb2, Lamc1, MGI:99914,
NCBI:226519, OFF:Lamc1

Chr 1

ORFs

218 ORFs

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF lenght The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
748947	255	GTG ...	VSV ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, R1E, v6-5
1213738	51	AGA ...	RMK ...	Ribo-seq	AGA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
541892	213	CTG ...	LDF ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, NSC, v6-5
743455	249	GTG ...	VTA ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, R1E, v6-5
541737	114	ATG ...	MNS ...	Ribo-seq	ATG		5	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, E14, Glioma, Liver, MEF, MESC, R1E, v6-5
707215	51	GTG ...	VQR ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Overlapping sORF Upstream	3T3
1615830	177	ATG ...	MLW ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
642961	84	CTG ...	LPR ...	Ribo-seq	CTG		7	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, MEF, NSC, R1E, v6-5
1295368	123	TTG ...	LEM ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
715257	69	TTG ...	LLK ...	Ribo-seq	TTG	weak	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, NSC, v6-5
688018	39	ATG ...	MRQ ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
1287614	126	ATC ...	IWS ...	Ribo-seq	ATC		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
706034	57	CTG ...	LSS ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14
1296158	132	ATA ...	ITH ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1209447	153	ATA ...	ITQ ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
649270	114	GTG ...	VNA ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, v6-5
1199595	96	TTG ...	LWA ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
733891	141	GTG ...	VPS ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, v6-5
1336586	42	CTG ...	LQS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
1219196	102	AAG ...	KWC ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
713715	63	ATG ...	MKQ ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	3T3, Brain, Glioma, Liver, MEF, MESC
1626387	96	GTG ...	VSA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
731911	144	ATG ...	MVP ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, v6-5
1194071	78	CTG ...	LAA ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC
1183147	111	ATC ...	ILR ...	Ribo-seq	ATC		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
510467	78	ATG ...	MGG ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Spleen_B_cell
1184186	240	ATA ...	ISA ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
540711	135	CTG ...	LVS ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, NSC, v6-5
1214561	246	ATA ...	ISA ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1199781	222	ATA ...	IQP ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
738253	279	GTG ...	VRP ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, R1E, v6-5
1206801	66	AAG ...	KPD ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
684971	75	CTG ...	LVA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, NSC
737653	198	TTG ...	LGL ...	Ribo-seq	TTG		7	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, MEF, NSC, R1E, v6-5
741390	156	TTG ...	LAI ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, v6-5
637102	33	GTG ...	VHK ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, v6-5
734378	63	CTG ...	LLV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, v6-5
1210843	78	ATC ...	IQP ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1294209	225	AAG ...	KSA ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1496726	51	CTG ...	LAW ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	NSC
1304394	117	TTG ...	LTV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1340616	150	GTG ...	VRR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, NSC
739005	114	TTG ...	LEM ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, v6-5
734688	105	GTG ...	VTF ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, R1E, v6-5
1213477	150	ATT ...	ILL ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
714165	69	CTG ...	LLR ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14
740276	105	ATG ...	MRQ ...	Ribo-seq	ATG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, NSC, v6-5
538557	192	ATG ...	MGT ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, R1E, v6-5
738151	204	CTG ...	LNY ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, v6-5
621849	237	GTG ...	VTA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
671091	48	GTG ...	VPV ...	Ribo-seq	GTG	moderate	5	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, MEF, R1E, v6-5
6291	33	TTG ...	LET ...	Ribo-seq	TTG	strong	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, Skin_tumor
664230	156	ATG ...	MKD ...	Ribo-seq	ATG	moderate	5	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, MEF, v6-5
747761	276	GTG ...	VTS ...	Ribo-seq	GTG		6	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, MEF, NSC, R1E, v6-5
722184	60	ATG ...	MRA ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	3T3, Glioma, Liver, MEF, MESC
419485	192	GTG ...	VGP ...	Ribo-seq	GTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, C2C12, E14, MEF, R1E, v6-5
677820	75	CTG ...	LPL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, NSC, v6-5
1207768	93	ATC ...	IPW ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
128705	141	CTG ...	LPL ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, MEF, NSC, v6-5
682689	57	GTG ...	VWD ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF
736037	144	ATG ...	MLP ...	Ribo-seq	ATG		7	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, E14, Glioma, Liver, MEF, MESC, NSC, v6-5
739737	201	ATG ...	MGT ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, R1E, v6-5
684644	84	CTG ...	LRP ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	3T3
720626	111	CTG ...	LMN ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, R1E, v6-5
746626	270	CTG ...	LRA ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, v6-5
1634350	159	ATG ...	MGS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
1155902	33	ATG ...	MQG ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	E14, Glioma, Liver, MEF, MESC, v6-5
738732	243	GTG ...	VTA ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, v6-5
729259	48	ATG ...	MPE ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, E14, Glioma, Liver, MEF, MESC
1218589	123	AGG ...	RPR ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1310164	39	AGG ...	RVQ ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1138262	36	CTG ...	LDS ...	Ribo-seq	CTG	strong	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, v6-5
638624	156	GTG ...	VAS ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, R1E, v6-5
700829	147	TTG ...	LPR ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3
742282	126	TTG ...	LAT ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF
680974	300	TTG ...	LTS ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, R1E, v6-5
646172	108	ATG ...	MNS ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, R1E, v6-5
453176	39	GTG ...	VTV ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell, v6-5
729767	78	ATG ...	MLP ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, NSC
469880	57	GTG ...	VNS ...	Ribo-seq	GTG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell, v6-5
734258	117	GTG ...	VFM ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF
1223771	129	ATC ...	IKL ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
538614	234	ATG ...	MAD ...	Ribo-seq	ATG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, v6-5
540288	297	ATG ...	MTG ...	Ribo-seq	ATG		6	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, E14, Glioma, Liver, MEF, MESC, v6-5
672516	159	CTG ...	LSP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14
745379	186	CTG ...	LDM ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, v6-5
733291	60	TTG ...	LVL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, v6-5
510560	54	ATG ...	MAR ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
740443	129	CTG ...	LLA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
480751	33	CTG ...	LQR ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, R1E, Spleen_B_cell
752177	48	CTG ...	LWA ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, v6-5
1160338	243	CTG ...	LAS ...	Ribo-seq	CTG		5	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, NSC, R1E, v6-5
723104	90	ATG ...	MGR ...	Ribo-seq	ATG	strong	3	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, Glioma, Liver, MEF, MESC, R1E
474150	36	CTG ...	LPC ...	Ribo-seq	CTG	weak	5	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, MEF, R1E, Spleen_B_cell, v6-5
748952	273	CTG ...	LLR ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, v6-5
640175	99	GTG ...	VTF ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, R1E, v6-5
687569	72	GTG ...	VKR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
749281	93	CTG ...	LKP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, v6-5
546267	186	CTG ...	LKA ...	Ribo-seq	CTG		6	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, MEF, R1E, v6-5
715518	33	CTG ...	LLS ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, v6-5
1226685	114	ATT ...	ISS ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
723669	186	GTG ...	VTA ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, R1E
1185829	180	ATG ...	MGT ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
740359	96	TTG ...	LRS ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, v6-5
737649	177	GTG ...	VAT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, v6-5
1209037	123	ACG ...	TAV ...	Ribo-seq	ACG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
693807	78	GTG ...	VAT ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, R1E, v6-5
396867	66	TTG ...	LCH ...	Ribo-seq	TTG		9	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14, MEF, NSC, R1E, Spleen_B_cell, v6-5
419578	225	AAG ...	KTG ...	Ribo-seq	AAG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	C2C12, E14
546531	66	ATG ...	MTL ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC, R1E
740179	243	GTG ...	VSV ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14
1287723	165	ACG ...	TSL ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1227374	144	ATA ...	ITR ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
745687	84	GTG ...	VAT ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, R1E, v6-5
12329	33	GTG ...	VHA ...	Ribo-seq	GTG		9	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14, MEF, NSC, R1E, Skin_tumor, Spleen_B_cell, v6-5
650876	45	GTG ...	VRE ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, NSC, v6-5
656347	204	GTG ...	VRN ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
16483	78	CTG ...	LAL ...	Ribo-seq	CTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, R1E, Skin_tumor, Spleen_B_cell, v6-5
659422	165	TTG ...	LAR ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	Overlapping sORF Upstream	3T3, MEF
538118	144	CTG ...	LCA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
746583	117	CTG ...	LMN ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, R1E, v6-5
1227225	222	AAG ...	KSA ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1722203	48	ATG ...	MKQ ...	Ribo-seq	ATG	moderate	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
645840	33	GTG ...	VSG ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, MEF
664641	48	CTG ...	LRL ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14
544848	132	ATG ...	MLL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14
414408	108	AAG ...	KNL ...	Ribo-seq	AAG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	C2C12, E14
732702	162	GTG ...	VAS ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, R1E, v6-5
421229	45	ATC ...	IKP ...	Ribo-seq	ATC	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	C2C12
476363	45	ATG ...	MTA ...	Ribo-seq	ATG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, Spleen_B_cell, v6-5
138606	66	CTG ...	LKK ...	Ribo-seq	CTG	weak	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, NSC, v6-5
701817	114	CTG ...	LCW ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
741089	63	CTG ...	LRP ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, NSC
464932	39	CTG ...	LHL ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Spleen_B_cell
741595	189	GTG ...	VRT ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, R1E, v6-5
692107	39	GTG ...	VPT ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, NSC, R1E
479197	42	GTG ...	VGL ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Spleen_B_cell
1163964	213	GTG ...	VRP ...	Ribo-seq	GTG		6	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, NSC, R1E, v6-5
535979	108	ATG ...	MKC ...	Ribo-seq	ATG		4	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, Glioma, Liver, MEF, MESC, v6-5
735881	222	GTG ...	VSA ...	Ribo-seq	GTG		6	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, MEF, NSC, R1E, v6-5
1604299	150	GTG ...	VTS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
1223312	90	AAG ...	KPA ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
311905	69	ATG ...	MPP ...	Ribo-seq	ATG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, MEF, v6-5
690868	84	ATG ...	MLP ...	Ribo-seq	ATG	weak	5	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, E14, Glioma, Liver, MEF, MESC, NSC, v6-5
733372	270	GTG ...	VTR ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, R1E, v6-5
1490099	57	GTG ...	VTL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC
124160	93	TTG ...	LQS ...	Ribo-seq	TTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, NSC, R1E, v6-5
785020	42	CTG ...	LPG ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, MEF
89	72	CTG ...	LPA ...	Ribo-seq	CTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, R1E, Skin_tumor, Spleen_B_cell, v6-5
664294	30	TTG ...	LSA ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, v6-5
1488146	33	GTG ...	VPA ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	NSC
704211	138	CTG ...	LDF ...	Ribo-seq	CTG		5	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, MEF, v6-5
1183573	153	CTG ...	LTA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
735223	51	TTG ...	LLW ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, v6-5
1218718	129	AGG ...	RPC ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1220108	231	AAG ...	KTG ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1184285	87	ATC ...	IAV ...	Ribo-seq	ATC	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
1223521	138	ACG ...	TSS ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
737661	198	GTG ...	VGP ...	Ribo-seq	GTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, R1E, v6-5
672505	54	GTG ...	VVL ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, v6-5
1220564	132	ACG ...	TPR ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
649935	90	TTG ...	LSL ...	Ribo-seq	TTG		6	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, NSC, R1E, v6-5
673886	33	CTG ...	LRS ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, v6-5
460084	33	CTG ...	LSS ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Spleen_B_cell
1755604	51	GTG ...	VGG ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, R1E
641702	81	CTG ...	LPR ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, NSC, v6-5
1609461	117	CTG ...	LAS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
732635	111	TTG ...	LKN ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, v6-5
711174	54	CTG ...	LLW ...	Ribo-seq	CTG	weak	7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, NSC, v6-5
694038	69	CTG ...	LTP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, NSC
1142403	168	GTG ...	VTV ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, v6-5
1275580	189	ATG ...	MGT ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1222325	108	AAG ...	KGF ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
544839	111	ATG ...	MTS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
748201	210	TTG ...	LIL ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, v6-5
135026	120	TTG ...	LSQ ...	Ribo-seq	TTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, R1E, v6-5
672463	33	CTG ...	LQW ...	Ribo-seq	CTG	weak	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, v6-5
736734	126	GTG ...	VPL ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, R1E, v6-5
550473	90	GTG ...	VSG ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
694091	57	CTG ...	LLR ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, NSC, v6-5
1504447	129	GTG ...	VSA ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC
1192401	132	ACG ...	TSS ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
704879	42	GTG ...	VSA ...	Ribo-seq	GTG	weak	5	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, BMDC, E14, MEF, R1E
731956	135	CTG ...	LTP ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, NSC, v6-5
459009	48	GTG ...	VMT ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, Spleen_B_cell, v6-5
1158072	48	GTG ...	VPP ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC, v6-5
706430	96	GTG ...	VAR ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, v6-5
647851	69	CTG ...	LHT ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, NSC, v6-5
1190484	30	AAG ...	KRN ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
545004	45	GTG ...	VPT ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, NSC, R1E
1153823	51	CTG ...	LAT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
737771	165	CTG ...	LTA ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, v6-5
585503	63	CTG ...	LTW ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, v6-5
672849	60	CTG ...	LLL ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, NSC, v6-5
719661	81	TTG ...	LAI ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, v6-5
144936	123	CTG ...	LRW ...	Ribo-seq	CTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, v6-5
541449	84	ATG ...	MRM ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF
1308465	213	TTG ...	LIL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
748332	285	ATG ...	MGS ...	Ribo-seq	ATG		8	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, MEF, NSC, R1E, v6-5
1229262	123	AGG ...	RPC ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1166970	288	ATG ...	MGT ...	Ribo-seq	ATG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, R1E, v6-5
474138	72	GTG ...	VAA ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
1162970	255	GTG ...	VSA ...	Ribo-seq	GTG		5	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, NSC, R1E, v6-5
704830	99	CTG ...	LPA ...	Ribo-seq	CTG		6	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, E14, MEF, NSC, v6-5
1321985	72	GTG ...	VAK ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, NSC
742620	72	CTG ...	LWT ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, NSC
688317	183	GTG ...	VRT ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, R1E, v6-5
1221692	66	ACG ...	TQS ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1701002	90	ATG ...	MNK ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
666274	84	ATG ...	MCL ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, NSC, v6-5
415886	192	TTG ...	LDL ...	Ribo-seq	TTG		8	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, C2C12, E14, MEF, NSC, R1E, v6-5
750184	180	ATG ...	MVA ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, v6-5
539948	216	GTG ...	VRN ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, MEF, R1E, v6-5
1292889	237	ATG ...	MAD ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF
660761	42	CTG ...	LQP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
735159	138	GTG ...	VAQ ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF, R1E, v6-5
589286	159	TTG ...	LTN ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14
1701449	246	GTG ...	VTA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF

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