Transcript 1337 | MetamORF

Transcript

ID CARD

MetamORF ID

1337

ENSMUST00000027127

Name

Sf3b1-201

Strand

Biotype

protein_coding

Start-end positions

54985169-55027481

CDS Start-stop positions

54987334-55027366

CDS Relative positions

Sequences

Transcript sequence

ACA ...

Genome browsers

UCSC

Gene

NCBI:81898

Aliases

155kDa,
2810001M05Rik, AA409119, ENSMUSG00000025982,
MGI:1932339, NCBI:81898, OFF:Sf3b1,
Prp10, SAP155, Sf3b1,
SF3b155, TA-8, Targ4

Chr 1

ORFs

210 ORFs

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF lenght The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
52722	276	CTG ...	LRE ...	Ribo-seq	CTG		9	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, E14, MEF, R1E, Spleen_B_cell, Testis, v6-5
1225833	180	ACG ...	TMT ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
478957	99	CTG ...	LLW ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, NSC, Spleen_B_cell
456938	33	ATG ...	MTS ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, v6-5
1141621	36	CTG ...	LCY ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
951062	39	ATC ...	IGK ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
391415	144	ATG ...	MEV ...	Ribo-seq	ATG	strong	5	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, MEF, v6-5
486210	69	ATG ...	MKK ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Spleen_B_cell
481421	45	GTG ...	VQK ...	Ribo-seq	GTG	weak	8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, E14, Liver, MEF, NSC, Spleen_B_cell, v6-5
940828	129	AAG ...	KFG ...	Ribo-seq	AAG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
1353	87	ATG ...	MKK ...	Ribo-seq	ATG		12	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, E14, MEF, Neutrophil, Skin_tumor, Spleen_B_cell, v6-5
12912	30	CTG ...	LNM ...	Ribo-seq	CTG	moderate	8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, MEF, Neutrophil, Skin_tumor, Spleen_B_cell, v6-5
454697	105	GTG ...	VET ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, v6-5
58718	129	CTG ...	LGE ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
505385	66	GTG ...	VPL ...	Ribo-seq	GTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, Liver, NSC, R1E, Spleen_B_cell
447424	75	TTG ...	LEN ...	Ribo-seq	TTG	strong	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC, Spleen_B_cell
505257	45	TTG ...	LMV ...	Ribo-seq	TTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, MEF, Spleen_B_cell, v6-5
896498	96	AAG ...	KLT ...	Ribo-seq	AAG		1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
7554	33	TTG ...	LYD ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC
446619	207	GTG ...	VKH ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14, MEF, NSC, v6-5
951290	132	AAG ...	KHR ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
935564	153	ATA ...	IHL ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
147896	105	ATG ...	MIY ...	Ribo-seq	ATG		15	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, R1E, Spleen_B_cell, v6-5
126869	126	ATG ...	MPP ...	Ribo-seq	ATG		14	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
23254	39	ATG ...	MLP ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
371745	51	ATG ...	MPP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
30491	60	GTG ...	VQW ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil, NSC
38318	102	ATG ...	MTT ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, Liver, MEF, NSC
933631	87	AGG ...	RQQ ...	Ribo-seq	AGG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
110187	177	ATG ...	MTT ...	Ribo-seq	ATG		14	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
489154	219	ATG ...	MVV ...	Ribo-seq	ATG		8	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, E14, MEF, R1E, Spleen_B_cell, v6-5
943080	54	ATT ...	ILC ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
502631	57	ATG ...	MTW ...	Ribo-seq	ATG		10	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, MEF, NSC, Spleen_B_cell, v6-5
499863	81	CTG ...	LTR ...	Ribo-seq	CTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, Liver, NSC, R1E, Spleen_B_cell
383251	129	CTG ...	LRL ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, MEF, v6-5
360386	60	CTG ...	LDI ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14, MEF
484018	114	GTG ...	VLW ...	Ribo-seq	GTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, NSC, Spleen_B_cell
446374	36	CTG ...	LVS ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil
966744	144	AAG ...	KFG ...	Ribo-seq	AAG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
495613	234	ATG ...	MRH ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC, v6-5
968879	75	AAG ...	KRI ...	Ribo-seq	AAG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
51333	45	TTG ...	LIL ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, Liver, NSC, Testis
571253	33	CTG ...	LKY ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, MEF
447283	51	CTG ...	LCS ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Spleen_B_cell
1225239	90	ATC ...	IRP ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
433813	36	ATG ...	MQN ...	Ribo-seq	ATG	weak	11	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, NSC, Spleen_B_cell, v6-5
729340	78	CTG ...	LPY ...	Ribo-seq	CTG	moderate	8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, MEF, R1E, v6-5
720300	33	TTG ...	LIQ ...	Ribo-seq	TTG	weak	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, MEF, NSC, v6-5
1224737	30	AGA ...	RFL ...	Ribo-seq	AGA		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
16087	45	TTG ...	LPI ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil
465902	93	TTG ...	LVK ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, v6-5
493988	66	CTG ...	LCS ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Spleen_B_cell
1157581	30	CTG ...	LWY ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF, NSC, v6-5
1621044	30	ATG ...	MKL ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
495110	180	ATG ...	MRP ...	Ribo-seq	ATG		10	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, E14, MEF, R1E, Spleen_B_cell, v6-5
123470	123	TTG ...	LDH ...	Ribo-seq	TTG		12	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, MEF, NSC, R1E, Spleen_B_cell, v6-5
962036	39	ATA ...	IHL ...	Ribo-seq	ATA		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
948861	57	ACG ...	TSQ ...	Ribo-seq	ACG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
355582	36	ATG ...	MVE ...	Ribo-seq	ATG	moderate	5	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Liver, MEF, Neutrophil
491560	87	ATG ...	MVL ...	Ribo-seq	ATG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, NSC, Spleen_B_cell, v6-5
497840	117	TTG ...	LLL ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, NSC, Spleen_B_cell, v6-5
967718	69	ATT ...	ILC ...	Ribo-seq	ATT		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
327392	150	CTG ...	LGM ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, MEF, v6-5
494943	60	TTG ...	LMT ...	Ribo-seq	TTG		12	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, MEF, NSC, Spleen_B_cell, v6-5
20994	45	TTG ...	LSI ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, MEF
686786	66	ATG ...	MLL ...	Ribo-seq	ATG	weak	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, v6-5
502714	234	ATG ...	MQP ...	Ribo-seq	ATG		9	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, E14, MEF, R1E, Spleen_B_cell, v6-5
480139	33	ATG ...	MTF ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
894410	42	ATT ...	IWL ...	Ribo-seq	ATT		2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, E14
460970	117	ATG ...	MEQ ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC
721386	45	ATG ...	MNM ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, NSC, v6-5
36604	48	CTG ...	LVP ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC
17005	57	TTG ...	LLD ...	Ribo-seq	TTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, MEF, Neutrophil, Skin_tumor, Spleen_B_cell, v6-5
948243	39	ATA ...	ISA ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
492394	174	TTG ...	LNM ...	Ribo-seq	TTG		11	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, MEF, NSC, R1E, Spleen_B_cell, v6-5
501158	168	ATG ...	MVS ...	Ribo-seq	ATG		11	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, MEF, NSC, R1E, Spleen_B_cell, v6-5
497693	39	ATG ...	MCT ...	Ribo-seq	ATG		7	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, MEF, Spleen_B_cell, v6-5
504753	213	GTG ...	VLS ...	Ribo-seq	GTG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, MEF, NSC, R1E, Spleen_B_cell, v6-5
653875	30	TTG ...	LRI ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, v6-5
893489	69	ATT ...	IVL ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
449818	30	CTG ...	LNL ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	NSC
292484	78	ATG ...	MIH ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Neutrophil
949119	39	AAG ...	KRG ...	Ribo-seq	AAG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
1204267	39	AAG ...	KQE ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
28839	108	ATG ...	MTM ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, Liver, MEF, NSC
746359	42	CTG ...	LMT ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, MEF, R1E, v6-5
489731	240	ATG ...	MGS ...	Ribo-seq	ATG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
679039	60	TTG ...	LAN ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, v6-5
41552	93	TTG ...	LMK ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, Neutrophil, NSC
930310	75	ATC ...	IHL ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
935227	63	ATC ...	IIH ...	Ribo-seq	ATC	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
469698	75	CTG ...	LEQ ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	v6-5
503003	138	ATG ...	MEQ ...	Ribo-seq	ATG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, Liver, NSC, R1E, Spleen_B_cell
25730	147	CTG ...	LRE ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, v6-5
19275	30	ATG ...	MLS ...	Ribo-seq	ATG		11	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, C2C12, E14, MEF, Spleen_B_cell, Testis, v6-5
90335	138	CTG ...	LLL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
49786	81	TTG ...	LSL ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Spleen_B_cell, Testis
445251	141	ATG ...	MSS ...	Ribo-seq	ATG		11	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, NSC, R1E, Spleen_B_cell, v6-5
642840	45	GTG ...	VKS ...	Ribo-seq	GTG	weak	7	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, MEF, Neutrophil, R1E
969430	102	AGG ...	RQQ ...	Ribo-seq	AGG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
152764	198	GTG ...	VFD ...	Ribo-seq	GTG		14	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
36748	81	TTG ...	LFT ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF, Neutrophil, NSC
570456	39	ATG ...	MSE ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, NSC, v6-5
732142	81	ATG ...	MLC ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, E14, Liver, R1E, v6-5
971082	42	ATC ...	ILL ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
150485	36	TTG ...	LQM ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Liver, NSC
42020	39	CTG ...	LKH ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
368508	51	ATG ...	MTK ...	Ribo-seq	ATG	moderate	4	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Liver, MEF, Neutrophil
455784	90	CTG ...	LRQ ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, NSC, Spleen_B_cell
1181437	66	AGG ...	RLL ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
24385	72	ATG ...	MVL ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, Spleen_B_cell, Testis
945513	42	ATA ...	ITN ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
895791	60	ATA ...	IHL ...	Ribo-seq	ATA		1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
27113	42	TTG ...	LLK ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
725539	57	ATG ...	MNI ...	Ribo-seq	ATG	weak	8	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, MEF, Neutrophil, R1E, v6-5
19794	42	ATG ...	MVF ...	Ribo-seq	ATG		11	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, MEF, Spleen_B_cell, Testis, v6-5
25799	39	GTG ...	VQQ ...	Ribo-seq	GTG	weak	9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, E14, MEF, Neutrophil, Spleen_B_cell, Testis, v6-5
963780	75	AAG ...	KLT ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
94948	66	CTG ...	LSI ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Neutrophil
797273	69	ATG ...	MKI ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, Brain, v6-5
947061	96	AAG ...	KQT ...	Ribo-seq	AAG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
918933	78	ATA ...	ILE ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
747437	81	TTG ...	LMK ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, MEF, v6-5
130871	183	ATG ...	MTM ...	Ribo-seq	ATG		15	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
1186604	69	AAG ...	KLC ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
468072	45	ATG ...	MNQ ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, Spleen_B_cell
1216756	87	AAG ...	KLL ...	Ribo-seq	AAG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
17201	63	TTG ...	LIL ...	Ribo-seq	TTG		12	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, BMDC, Brain, MEF, Neutrophil, Skin_tumor, Spleen_B_cell, v6-5
1210479	75	AAG ...	KIT ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
493368	216	GTG ...	VVQ ...	Ribo-seq	GTG		10	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, E14, MEF, R1E, Spleen_B_cell, v6-5
505043	72	TTG ...	LIL ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Spleen_B_cell
732492	51	TTG ...	LMV ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, MEF, v6-5
462130	39	CTG ...	LVM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
139629	30	ATG ...	MEG ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Liver, NSC
535355	102	TTG ...	LLL ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, NSC, Spleen_B_cell
137347	210	GTG ...	VTF ...	Ribo-seq	GTG		13	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
489590	129	GTG ...	VLW ...	Ribo-seq	GTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, NSC, Spleen_B_cell, v6-5
482486	72	TTG ...	LGA ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	B_cell, BMDC, MEF
486368	60	TTG ...	LGI ...	Ribo-seq	TTG	moderate	9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, Liver, MEF, Neutrophil, Spleen_B_cell, v6-5
1202104	66	AAG ...	KIT ...	Ribo-seq	AAG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
937337	63	AAG ...	KLF ...	Ribo-seq	AAG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
500825	156	ATG ...	MSS ...	Ribo-seq	ATG		12	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, MEF, NSC, R1E, Spleen_B_cell, v6-5
149528	36	ATG ...	MLS ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, MEF, v6-5
464256	75	CTG ...	LNS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
457698	33	ATG ...	MFL ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, Liver
24763	33	GTG ...	VEV ...	Ribo-seq	GTG	strong	5	sORFs_org_Mouse	InCDS Overlapping sORF	Liver, MEF, Neutrophil, NSC
545694	69	CTG ...	LVP ...	Ribo-seq	CTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, Liver, NSC, R1E
448379	90	GTG ...	VKH ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, E14, MEF, v6-5
957380	60	ATC ...	IVL ...	Ribo-seq	ATC	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
445528	69	GTG ...	VWC ...	Ribo-seq	GTG	weak	9	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, E14, MEF, Neutrophil, Spleen_B_cell, v6-5
684180	60	CTG ...	LIK ...	Ribo-seq	CTG	weak	10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, R1E, v6-5
941905	33	AAG ...	KMN ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
934934	54	ATC ...	ILF ...	Ribo-seq	ATC	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
466646	33	TTG ...	LVI ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, Neutrophil, Spleen_B_cell, v6-5
493494	183	TTG ...	LKS ...	Ribo-seq	TTG		11	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, MEF, NSC, R1E, Spleen_B_cell, v6-5
745643	78	ATG ...	MKI ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, MEF, v6-5
488894	213	GTG ...	VQL ...	Ribo-seq	GTG		9	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, E14, MEF, R1E, Spleen_B_cell, v6-5
467832	57	TTG ...	LIL ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Spleen_B_cell
144519	129	TTG ...	LLL ...	Ribo-seq	TTG		11	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, MEF, NSC, R1E, Spleen_B_cell, v6-5
663001	42	TTG ...	LEL ...	Ribo-seq	TTG	strong	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, MEF, v6-5
665242	45	TTG ...	LLL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	NSC
34149	90	ATG ...	MKP ...	Ribo-seq	ATG	weak	5	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, Brain, MEF, Neutrophil, NSC
490208	105	CTG ...	LRQ ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, NSC, Spleen_B_cell, v6-5
52899	267	CTG ...	LLL ...	Ribo-seq	CTG		9	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, E14, MEF, R1E, Spleen_B_cell, Testis, v6-5
475685	45	TTG ...	LLL ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, E14
751271	39	ATG ...	MTF ...	Ribo-seq	ATG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, MEF, v6-5
1226431	96	AAG ...	KQT ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1206509	39	ATA ...	ICI ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
716341	36	CTG ...	LDH ...	Ribo-seq	CTG	strong	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, E14, v6-5
946529	81	AAG ...	KEW ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
501306	81	TTG ...	LIE ...	Ribo-seq	TTG		12	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, MEF, NSC, Spleen_B_cell, v6-5
747920	66	ATG ...	MLE ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, E14, R1E, v6-5
513943	39	GTG ...	VSM ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, v6-5
10402	33	GTG ...	VFT ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC
494564	258	CTG ...	LGE ...	Ribo-seq	CTG		8	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, E14, MEF, R1E, Spleen_B_cell, v6-5
495788	114	CTG ...	LLW ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, NSC, Spleen_B_cell, v6-5
498366	201	GTG ...	VLV ...	Ribo-seq	GTG		9	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, BMDC, E14, MEF, R1E, Spleen_B_cell, v6-5
10707	30	ATG ...	MNT ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
32519	60	CTG ...	LTR ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC
1194306	45	ATA ...	ILA ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
29105	111	ATG ...	MGP ...	Ribo-seq	ATG	strong	4	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, E14, MEF, NSC
493155	48	ATG ...	MVF ...	Ribo-seq	ATG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, MEF, Spleen_B_cell, v6-5
37439	39	ATG ...	MCG ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Neutrophil
310731	42	ATG ...	MLE ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC
714341	72	TTG ...	LMK ...	Ribo-seq	TTG		4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, Brain, v6-5
1221345	78	ATA ...	IEY ...	Ribo-seq	ATA		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
945469	102	AGG ...	RQL ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
952004	57	ACG ...	TYI ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
438617	66	CTG ...	LCA ...	Ribo-seq	CTG	moderate	7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, E14, MEF, NSC, Spleen_B_cell, v6-5
505363	54	TTG ...	LVI ...	Ribo-seq	TTG		4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, Spleen_B_cell, v6-5
937782	30	ATA ...	ILT ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
451495	219	GTG ...	VQK ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC, v6-5
1336	54	TTG ...	LDA ...	Ribo-seq	TTG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, E14, MEF, Neutrophil, Skin_tumor, Spleen_B_cell, v6-5
322977	138	GTG ...	VDG ...	Ribo-seq	GTG	strong	5	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, MEF, v6-5
897694	60	ATC ...	ILL ...	Ribo-seq	ATC		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
1213075	33	ATC ...	ICK ...	Ribo-seq	ATC	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
1181233	54	AAG ...	KLE ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
951708	54	ATA ...	ITW ...	Ribo-seq	ATA	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, E14
8539	36	TTG ...	LVF ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC
1221855	147	AAG ...	KSS ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
461793	198	CTG ...	LAQ ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC, v6-5
450210	69	TTG ...	LIP ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, Neutrophil, NSC
24786	45	GTG ...	VPL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC
1154896	36	CTG ...	LPW ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, v6-5
143155	135	CTG ...	LDI ...	Ribo-seq	CTG		14	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, v6-5
457942	45	ATG ...	MNT ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, NSC
971490	84	AAG ...	KLF ...	Ribo-seq	AAG		2	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, E14
446617	66	TTG ...	LSL ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Spleen_B_cell
359237	69	TTG ...	LLS ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Neutrophil
454588	51	GTG ...	VCS ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	E14, MEF, Neutrophil, NSC

Export data