Metam
ORF

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Result of the search

Transcript

Research

DataBase

mmusculus

Provided transcript ID

BC100530-202

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript
name

The transcript name (e.g. MDK-202).

Strand

The strand of the transcript (+ or -)

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Gene
ID

The gene ID. Usually the HGNC ID for H. sapiens genes and the NCBI ID for M. musculus genes.

Gene aliases

A comma-separated list of symbols, IDs and/or aliases known for the gene.

Start-end positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and end of the transcript (in a 1-based system).

CDS start-stop positions

The absolute genomic positions (i.e. the positions on the chromosome) of the start and stop codons of the main (canonical) coding sequence of the transcript (i.e. the CDS, in a 1-based system). These values may only exist for coding transcripts.

1045453 ENSMUST00000138796 BC100530-202 - nonsense_mediated_decay BC100530 BC100530 36359385-36367548 36364191- 36367501
2457310 ENSMUST00000138796 BC100530-202 - nonsense_mediated_decay NCBI:100034684 Cstdc5, ENSMUSG00000071561, MGI:3696883,
NCBI:100034684, OFF:Cstdc5
36359385-36367548 36364191- 36367501