Transcript 1451 | MetamORF

Transcript

ID CARD

MetamORF ID

1451

ENST00000265447

Name

ANXA11-201

Strand

Biotype

protein_coding

Start-end positions

80155124-80172871

CDS Start-stop positions

80155853-80170871

CDS Relative positions

Sequences

Transcript sequence

AGA ...

Genome browsers

UCSC

Gene

HGNC:535

Aliases

ANX11,
ANXA11, ENSG00000122359, HGNC:535,
NCBI:311, OFF:ANXA11

Chr 10

ORFs

60 ORFs

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF lenght The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
281142	285	ATG ...	MGS ...	Ribo-seq	ATG		5	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, HEK293, LCL, MDA-MB-231, RPE-1
901703	60	CCA ...	PTS ...	Ribo-seq	CCA		3	sORFs_org_Human	InCDS Overlapping sORF	HeLa, Jurkat, THP-1
523913	42	TTG ...	LTP ...	Ribo-seq	TTG	moderate	15	sORFs_org_Human	InCDS Overlapping sORF	BJ, Blood, HAP1, HEK293, HeLa, hES, HFF, MDA-MB-231, MM1S, RPE-1, U2OS
275800	42	CTG ...	LNC ...	Ribo-seq	CTG	moderate	12	sORFs_org_Human	InCDS Overlapping sORF	BJ, Blood, HEK293, HeLa, hES, LCL, MDA-MB-231, RPE-1
2615657	33	GGA ...	GEA ...	Ribo-seq	GGA		2	sORFs_org_Human	InCDS Overlapping sORF	HeLa, THP-1
95711	84	CTG ...	LGS ...	Ribo-seq	CTG		12	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HEK293, HeLa, HFF, MDA-MB-231, RPE-1, THP-1
2802040	144	GTG ...	VWP ...	Ribo-seq	GTG		2	sORFs_org_Human	InCDS Overlapping sORF	MM1S, RPE-1
632900	192	CTG ...	LRI ...	Ribo-seq	CTG		3	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, MM1S, THP-1
275815	228	CTG ...	LGP ...	Ribo-seq	CTG	strong	8	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HEK293, LCL, MDA-MB-231, RPE-1, THP-1
630866	36	GTG ...	VLP ...	Ribo-seq	GTG		7	sORFs_org_Human	InCDS Overlapping sORF	Blood, HEK293, HeLa, MDA-MB-231, MM1S, RPE-1, THP-1
281132	138	ATG ...	MKA ...	Ribo-seq	ATG		16	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HEK293, HeLa, hES, HFF, LCL, MDA-MB-231, RPE-1, THP-1, U2OS
2542192	135	GTG ...	VPH ...	Ribo-seq	GTG		4	sORFs_org_Human	InCDS Overlapping sORF	HEK293, HeLa, MM1S, RPE-1
95713	108	CTG ...	LVS ...	Ribo-seq	CTG		13	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HEK293, HeLa, HFF, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS
523915	54	ATG ...	MLP ...	Ribo-seq	ATG	weak	15	sORFs_org_Human	InCDS Overlapping sORF	BJ, Blood, HAP1, HEK293, HeLa, hES, HFF, MDA-MB-231, MM1S, RPE-1, U2OS
632902	201	CTG ...	LLG ...	Ribo-seq	CTG		3	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, MM1S, THP-1
1816620	93	CTG ...	LTR ...	Ribo-seq	CTG	weak	1	sORFs_org_Human	Downstream sORF	HeLa
95723	120	GTG ...	VVV ...	Ribo-seq	GTG		13	sORFs_org_Human	Overlapping sORF Upstream	BJ, Blood, HEK293, HeLa, HFF, LCL, MDA-MB-231, MM1S, RPE-1, THP-1
95709	39	CTG ...	LGL ...	Ribo-seq	CTG		7	sORFs_org_Human	Alternative InCDS Overlapping sORF	HEK293, HeLa, LCL, MDA-MB-231, RPE-1, THP-1
275817	258	TTG ...	LEE ...	Ribo-seq	TTG	moderate	8	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HEK293, LCL, MDA-MB-231, RPE-1, THP-1
275805	144	ATG ...	MGC ...	Ribo-seq	ATG	moderate	9	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HEK293, hES, LCL, MDA-MB-231, RPE-1, THP-1
1457	183	CTG ...	LVS ...	Ribo-seq	CTG		16	sORFs_org_Human	InCDS Overlapping sORF	BJ, Blood, HAP1, HEK293, HeLa, HFF, LCL, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS
95721	117	GTG ...	VVP ...	Ribo-seq	GTG		13	sORFs_org_Human	Overlapping sORF Upstream	BJ, Blood, HEK293, HeLa, HFF, LCL, MDA-MB-231, MM1S, RPE-1, THP-1
1816618	81	GTG ...	VCH ...	Ribo-seq	GTG	moderate	1	sORFs_org_Human	Downstream sORF	HeLa
95719	57	CTG ...	LGR ...	Ribo-seq	CTG	moderate	15	sORFs_org_Human	Alternative Overlapping sORF Upstream	BJ, Blood, HEK293, HeLa, hES, HFF, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS
630869	102	CTG ...	LPG ...	Ribo-seq	CTG		3	sORFs_org_Human	Alternative InCDS Overlapping sORF	HeLa, RPE-1, THP-1
275819	267	CTG ...	LGH ...	Ribo-seq	CTG	moderate	9	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HEK293, LCL, MDA-MB-231, MM1S, RPE-1, THP-1
523917	57	CTG ...	LML ...	Ribo-seq	CTG	weak	16	sORFs_org_Human	InCDS Overlapping sORF	BJ, Blood, Brain, HAP1, HEK293, HeLa, hES, HFF, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS
281130	126	GTG ...	VRL ...	Ribo-seq	GTG		7	sORFs_org_Human	InCDS Overlapping sORF	Blood, HEK293, HeLa, LCL, MDA-MB-231, MM1S, RPE-1
281147	108	CTG ...	LSP ...	Ribo-seq	CTG		13	sORFs_org_Human	InCDS Overlapping sORF	BJ, Blood, HAP1, HEK293, HeLa, LCL, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS
1718531	72	CTG ...	LCR ...	Ribo-seq	CTG	weak	4	sORFs_org_Human	Alternative InCDS Overlapping sORF	Blood, HEK293, MDA-MB-231, RPE-1
275798	45	TTG ...	LRS ...	Ribo-seq	TTG	weak	13	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, Brain, HEK293, HEK293T, HeLa, HFF, LCL, MDA-MB-231, RPE-1, U2OS
275807	156	CTG ...	LFL ...	Ribo-seq	CTG	moderate	9	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HEK293, hES, LCL, MDA-MB-231, RPE-1, THP-1
281138	174	ATG ...	MTI ...	Ribo-seq	ATG		8	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HEK293, HeLa, HFF, LCL, MDA-MB-231, RPE-1
630879	168	CTG ...	LPS ...	Ribo-seq	CTG	weak	8	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HEK293, hES, MDA-MB-231, RPE-1, THP-1
275790	51	CTG ...	LPG ...	Ribo-seq	CTG		13	sORFs_org_Human	InCDS Overlapping sORF	BJ, Blood, HEK293, HFF, LCL, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS
275811	192	CTG ...	LAA ...	Ribo-seq	CTG	moderate	8	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HEK293, LCL, MDA-MB-231, RPE-1, THP-1
275821	42	ATG ...	MRG ...	Ribo-seq	ATG		13	sORFs_org_Human	InCDS Overlapping sORF	BJ, Blood, Brain, HEK293, HeLa, HFF, LCL, MDA-MB-231, MM1S, RPE-1, THP-1
281128	63	TTG ...	LRR ...	Ribo-seq	TTG		6	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, HEK293, LCL, MDA-MB-231, RPE-1
95717	102	GTG ...	VLP ...	Ribo-seq	GTG		12	sORFs_org_Human	Overlapping sORF Upstream	BJ, Blood, HEK293, HeLa, HFF, LCL, MDA-MB-231, MM1S, RPE-1, THP-1
1455	159	CTG ...	LGS ...	Ribo-seq	CTG		16	sORFs_org_Human	InCDS Overlapping sORF	BJ, Blood, HAP1, HEK293, HeLa, HFF, LCL, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS
630883	213	CTG ...	LAT ...	Ribo-seq	CTG	strong	7	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HEK293, MDA-MB-231, RPE-1, THP-1
275802	78	TTG ...	LEA ...	Ribo-seq	TTG	strong	17	sORFs_org_Human	InCDS Overlapping sORF	BJ, Blood, Brain, HAP1, HEK293, HeLa, HFF, LCL, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS
2615655	78	AAC ...	NKG ...	Ribo-seq	AAC	moderate	2	sORFs_org_Human	Alternative InCDS Overlapping sORF	HeLa, THP-1
275796	54	GTG ...	VMK ...	Ribo-seq	GTG		18	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HAP1, HEK293, HeLa, hES, HFF, LCL, MDA-MB-231, MM1S, RPE-1, U2OS
281140	180	GTG ...	VGM ...	Ribo-seq	GTG		6	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, HEK293, HeLa, LCL, MDA-MB-231, RPE-1
1450	96	ATG ...	MSR ...	Ribo-seq	ATG		19	sORFs_org_Human	InCDS Overlapping sORF	BJ, Blood, Brain, HAP1, HEK293, HeLa, hES, HFF, LCL, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS
275813	219	CTG ...	LGL ...	Ribo-seq	CTG	moderate	8	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HEK293, LCL, MDA-MB-231, RPE-1, THP-1
95715	99	CTG ...	LPT ...	Ribo-seq	CTG		14	sORFs_org_Human	Overlapping sORF Upstream	BJ, Blood, HEK293, HeLa, HFF, Jurkat, LCL, MDA-MB-231, MM1S, RPE-1, THP-1
3220045	210	ATG ...	MRK ...	Ribo-seq	ATG		1	sORFs_org_Human	Alternative InCDS Overlapping sORF	HeLa
523908	63	ATG ...	MSQ ...	Ribo-seq	ATG		8	sORFs_org_Human	InCDS Overlapping sORF	BJ, Blood, HEK293, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS
275792	84	ATG ...	MRP ...	Ribo-seq	ATG	weak	10	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, Brain, HEK293, HeLa, LCL, MDA-MB-231, RPE-1, THP-1
275794	51	ATG ...	MKA ...	Ribo-seq	ATG		16	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HAP1, HEK293, HeLa, hES, HFF, LCL, MDA-MB-231, MM1S, RPE-1
281136	162	CTG ...	LLP ...	Ribo-seq	CTG		11	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HEK293, HeLa, HFF, LCL, MDA-MB-231, RPE-1, THP-1
404709	30	GAA ...	ETL ...	Ribo-seq	GAA	weak	2	sORFs_org_Human	InCDS Overlapping sORF	HCT116, HEK293
1453	114	CTG ...	LGL ...	Ribo-seq	CTG		14	sORFs_org_Human	InCDS Overlapping sORF	BJ, Blood, HAP1, HEK293, HeLa, LCL, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS
95707	33	CTG ...	LSP ...	Ribo-seq	CTG		4	sORFs_org_Human	Alternative InCDS Overlapping sORF	HEK293, MDA-MB-231, RPE-1, THP-1
1499659	39	ATG ...	MRF ...	Ribo-seq	ATG	weak	4	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, HEK293, hES, MDA-MB-231
281134	141	GTG ...	VMK ...	Ribo-seq	GTG		16	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HEK293, HeLa, hES, HFF, LCL, MDA-MB-231, RPE-1, THP-1, U2OS
275809	183	TTG ...	LGS ...	Ribo-seq	TTG	strong	8	sORFs_org_Human	Alternative InCDS Overlapping sORF	BJ, Blood, HEK293, LCL, MDA-MB-231, RPE-1, THP-1
281144	81	TTG ...	LTA ...	Ribo-seq	TTG		16	sORFs_org_Human	InCDS Overlapping sORF	Blood, Brain, HEK293, HeLa, hES, HFF, LCL, MDA-MB-231, MM1S, RPE-1, THP-1, U2OS

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