Gene NCBI:93684 | MetamORF

Gene

ID CARD

NCBI:93684

Aliases

9430015P09Rik
ENSMUSG00000037072, MGI:1927947, NCBI:93684
OFF:Selenof, Selenof, Sep15

Chromosome

Transcripts

51 ORFs
6 known transcripts
92 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

16732

ENSMUST00000151086

Selenof-204

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
139476	36	TTG ...	LQR ...	Ribo-seq	TTG	weak	8	sORFs_org_Mouse	sORF	3T3, Brain, E14, MEF, Neutrophil, NSC, Spleen_B_cell
138014	33	CTG ...	LQL ...	Ribo-seq	CTG		9	sORFs_org_Mouse	sORF	3T3, Brain, E14, Liver, MEF, NSC, v6-5
53518	51	TTG ...	LSE ...	Ribo-seq	TTG	weak	10	sORFs_org_Mouse	sORF	3T3, E14, Liver, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
16903	33	TTG ...	LGR ...	Ribo-seq	TTG		8	sORFs_org_Mouse	sORF	3T3, E14, MEF, Neutrophil, NSC, Skin_tumor, v6-5
53743	36	CTG ...	LYA ...	Ribo-seq	CTG	moderate	8	sORFs_org_Mouse	sORF	3T3, E14, MEF, Neutrophil, NSC, v6-5
53552	84	TTG ...	LDS ...	Ribo-seq	TTG		10	sORFs_org_Mouse	sORF	3T3, E14, Liver, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
130430	54	CTG ...	LFA ...	Ribo-seq	CTG		11	sORFs_org_Mouse	sORF	3T3, Brain, E14, Liver, MEF, Neutrophil, NSC, Spleen_B_cell, v6-5
16731	42	GTG ...	VIN ...	Ribo-seq	GTG	moderate	9	sORFs_org_Mouse	sORF	3T3, Liver, MEF, Neutrophil, NSC, Skin_tumor, Spleen_B_cell, v6-5

52015

ENSMUST00000144859

Selenof-203

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1220479	90	ATC ...	IFL ...	Ribo-seq	ATC		1	sORFs_org_Mouse	ncRNA sORF	E14
130430	54	CTG ...	LFA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain
413372	141	AGG ...	RHA ...	Ribo-seq	AGG		1	sORFs_org_Mouse	ncRNA sORF	E14
53488	135	CTG ...	LAL ...	Ribo-seq	CTG		5	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, MEF, Testis
1219806	78	GTG ...	VDS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	E14
52703	168	CTG ...	LLW ...	Ribo-seq	CTG		7	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver, MEF, Spleen_B_cell, Testis
894880	162	CTG ...	LRP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	E14
139476	36	TTG ...	LQR ...	Ribo-seq	TTG	weak	3	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain
54931	102	CTG ...	LLP ...	Ribo-seq	CTG		10	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain, E14, Liver, MEF, Spleen_B_cell, Testis
53194	189	CTG ...	LVF ...	Ribo-seq	CTG		7	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver, MEF, Spleen_B_cell, Testis
54078	183	TTG ...	LGF ...	Ribo-seq	TTG		8	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, Liver, MEF, Spleen_B_cell, Testis
52527	39	GTG ...	VEE ...	Ribo-seq	GTG	strong	4	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Spleen_B_cell, Testis
1219389	57	ATC ...	ILF ...	Ribo-seq	ATC		1	sORFs_org_Mouse	ncRNA sORF	E14
53962	138	GTG ...	VDV ...	Ribo-seq	GTG		5	sORFs_org_Mouse	ncRNA sORF	Brain, MEF, Spleen_B_cell, Testis
893252	261	AGG ...	RAG ...	Ribo-seq	AGG		1	sORFs_org_Mouse	ncRNA sORF	E14
894519	249	GTG ...	VAA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	E14
138014	33	CTG ...	LQL ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain
54260	126	CTG ...	LLP ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	Brain, E14, Testis
1217961	33	AGG ...	RKK ...	Ribo-seq	AGG		1	sORFs_org_Mouse	ncRNA sORF	E14
55040	159	TTG ...	LGF ...	Ribo-seq	TTG		10	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain, E14, Liver, MEF, Spleen_B_cell, Testis
52014	129	CTG ...	LFH ...	Ribo-seq	CTG		5	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, MEF, Testis
16903	33	TTG ...	LGR ...	Ribo-seq	TTG		3	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14
53518	51	TTG ...	LSE ...	Ribo-seq	TTG		4	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Testis
55059	195	CTG ...	LGA ...	Ribo-seq	CTG		10	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain, E14, Liver, MEF, Spleen_B_cell, Testis
53552	84	TTG ...	LDS ...	Ribo-seq	TTG		4	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Testis
53783	99	TTG ...	LDD ...	Ribo-seq	TTG	moderate	7	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, Spleen_B_cell, Testis
52440	117	CTG ...	LDP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Testis
55259	141	TTG ...	LLC ...	Ribo-seq	TTG		9	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain, Liver, MEF, Spleen_B_cell, Testis
53743	36	CTG ...	LYA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	B_cell
54632	63	GTG ...	VGG ...	Ribo-seq	GTG		6	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver, MEF, Spleen_B_cell, Testis
16731	42	GTG ...	VIN ...	Ribo-seq	GTG		5	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, Testis
53630	66	ATG ...	MQR ...	Ribo-seq	ATG	moderate	7	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, MEF, Spleen_B_cell, Testis
143772	54	CTG ...	LRM ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, E14
54062	219	CTG ...	LGA ...	Ribo-seq	CTG		8	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, E14, Liver, MEF, Spleen_B_cell, Testis
54522	105	CTG ...	LKI ...	Ribo-seq	CTG		6	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, MEF, Spleen_B_cell, Testis
1218182	66	ATG ...	MKI ...	Ribo-seq	ATG		1	sORFs_org_Mouse	ncRNA sORF	E14
53345	165	TTG ...	LLC ...	Ribo-seq	TTG		6	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver, MEF, Testis
1222386	72	CTG ...	LRM ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	E14
54733	216	TTG ...	LCN ...	Ribo-seq	TTG		7	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver, MEF, Spleen_B_cell, Testis
55300	93	CTG ...	LDP ...	Ribo-seq	CTG		9	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain, Liver, MEF, Spleen_B_cell, Testis
895183	66	AGG ...	RVG ...	Ribo-seq	AGG		1	sORFs_org_Mouse	ncRNA sORF	E14
55386	207	TTG ...	LGR ...	Ribo-seq	TTG		9	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain, E14, Liver, MEF, Spleen_B_cell, Testis
53651	150	TTG ...	LRQ ...	Ribo-seq	TTG		7	sORFs_org_Mouse	ncRNA sORF	B_cell, Brain, Liver, MEF, Spleen_B_cell, Testis

554

ENSMUST00000082437

Selenof-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
53962	138	GTG ...	VDV ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, Liver, MEF, R1E
55395	75	TTG ...	LSE ...	Ribo-seq	TTG		17	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Spleen_B_cell, Testis, v6-5
52703	168	CTG ...	LLW ...	Ribo-seq	CTG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
138014	33	CTG ...	LQL ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver, R1E
54522	105	CTG ...	LKI ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, MEF, NSC, R1E
143772	54	CTG ...	LRM ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
144521	48	ATG ...	MKI ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
130430	54	CTG ...	LFA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
139476	36	TTG ...	LQR ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
53518	51	TTG ...	LSE ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver, R1E
972654	285	ACG ...	TAD ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC
553	66	GTG ...	VIN ...	Ribo-seq	GTG		18	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, Skin_tumor, Spleen_B_cell, Testis, v6-5
53552	84	TTG ...	LDS ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Liver, R1E
413372	141	AGG ...	RHA ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
53630	66	ATG ...	MQR ...	Ribo-seq	ATG	moderate	11	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
54632	63	GTG ...	VGG ...	Ribo-seq	GTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, Liver, MEF, Neutrophil, NSC, R1E
747807	105	GTG ...	VEH ...	Ribo-seq	GTG	moderate	6	sORFs_org_Mouse	Downstream Overlapping sORF	3T3, BMDC, E14, NSC, R1E, v6-5
53651	150	TTG ...	LRQ ...	Ribo-seq	TTG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
16731	42	GTG ...	VIN ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver, R1E

54893

ENSMUST00000106211

Selenof-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
53783	99	TTG ...	LDD ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	BMDC, Brain, Liver, MEF
53630	66	ATG ...	MQR ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Liver, MEF
55298	66	CTG ...	LRM ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, E14, Liver, MEF, Testis
54522	105	CTG ...	LKI ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC, Brain, Liver
52527	39	GTG ...	VEE ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Alternative Downstream sORF	BMDC, Brain, Liver
52703	168	CTG ...	LLW ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Liver, MEF
130430	54	CTG ...	LFA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Liver
54892	60	ATG ...	MKI ...	Ribo-seq	ATG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, E14, Liver, Testis
53651	150	TTG ...	LRQ ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Liver, MEF
138014	33	CTG ...	LQL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
139476	36	TTG ...	LQR ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Liver
413372	141	AGG ...	RHA ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	C2C12
53552	84	TTG ...	LDS ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Liver
54632	63	GTG ...	VGG ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, Brain, Liver

139919

ENSMUST00000198936

Selenof-206

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
893252	261	AGG ...	RAG ...	Ribo-seq	AGG	strong	1	sORFs_org_Mouse	Intronic sORF	BMDC
894519	249	GTG ...	VAA ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	BMDC
894880	162	CTG ...	LRP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	BMDC
54632	63	GTG ...	VGG ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Intronic sORF	3T3, Brain
895183	66	AGG ...	RVG ...	Ribo-seq	AGG	strong	1	sORFs_org_Mouse	Intronic sORF	BMDC
894444	138	TTG ...	LLL ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	BMDC

51809

ENSMUST00000198279

Selenof-205

retained_intron

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

53743

CTG ...

LYA ...

Ribo-seq

CTG

weak

sORFs_org_Mouse

Brain, Liver, Spleen_B_cell,
Testis

16903

TTG ...

LGR ...

Ribo-seq

TTG

strong

sORFs_org_Mouse

Brain, Spleen_B_cell, Testis

ORFs

51 ORFs
6 known transcripts
92 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

139476

TTG...

LQR...

TTG

sORF
ncRNA
Alternative
InCDS
Overlapping

3T3, Brain, E14,
MEF, Neutrophil, NSC,
Spleen_B_cell, B_cell, R1E,
BMDC, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
16732	ENSMUST00000151086	Selenof-204	protein_coding	Ribo-seq	weak	8	sORFs_org_Mouse
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq	weak	3	sORFs_org_Mouse
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
54893	ENSMUST00000106211	Selenof-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

1220479

ATC...

IFL...

ATC

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

130430

CTG...

LFA...

CTG

ncRNA
sORF
Alternative
InCDS
Overlapping

B_cell, Brain, BMDC,
Liver, R1E, 3T3,
E14, MEF, Neutrophil,
NSC, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
54893	ENSMUST00000106211	Selenof-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
16732	ENSMUST00000151086	Selenof-204	protein_coding	Ribo-seq		11	sORFs_org_Mouse

413372

141

AGG...

RHA...

AGG

ncRNA
sORF
Alternative
InCDS
Overlapping

E14, C2C12, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
54893	ENSMUST00000106211	Selenof-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

53962

138

GTG...

VDV...

GTG

Alternative
Overlapping
sORF
Upstream
ncRNA

3T3, Liver, MEF,
R1E, Brain, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		5	sORFs_org_Mouse

53488

135

CTG...

LAL...

CTG

ncRNA
sORF

B_cell, Brain, MEF,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		5	sORFs_org_Mouse

55395

TTG...

LSE...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq		17	sORFs_org_Mouse

1219806

GTG...

VDS...

GTG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

52703

168

CTG...

LLW...

CTG

ncRNA
sORF
Alternative
InCDS
Overlapping

B_cell, Brain, Liver,
MEF, Spleen_B_cell, Testis,
3T3, E14, Neutrophil,
NSC, R1E, v6-5,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		7	sORFs_org_Mouse
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq		10	sORFs_org_Mouse
54893	ENSMUST00000106211	Selenof-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

138014

CTG...

LQL...

CTG

sORF
Alternative
InCDS
Overlapping
ncRNA

3T3, Brain, E14,
Liver, MEF, NSC,
v6-5, R1E, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
16732	ENSMUST00000151086	Selenof-204	protein_coding	Ribo-seq		9	sORFs_org_Mouse
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq	moderate	3	sORFs_org_Mouse
54893	ENSMUST00000106211	Selenof-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

894880

162

CTG...

LRP...

CTG

ncRNA
sORF
Intronic

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
139919	ENSMUST00000198936	Selenof-206	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

53783

TTG...

LDD...

TTG

Alternative
Downstream
Overlapping
sORF
ncRNA

BMDC, Brain, Liver,
MEF, B_cell, E14,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
54893	ENSMUST00000106211	Selenof-202	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq	moderate	7	sORFs_org_Mouse

53630

ATG...

MQR...

ATG

Alternative
InCDS
Overlapping
sORF
ncRNA

BMDC, Liver, MEF,
B_cell, Brain, E14,
Spleen_B_cell, Testis, 3T3,
Neutrophil, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
54893	ENSMUST00000106211	Selenof-202	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq	moderate	7	sORFs_org_Mouse
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq	moderate	11	sORFs_org_Mouse

54931

102

CTG...

LLP...

CTG

ncRNA
sORF

3T3, B_cell, Brain,
E14, Liver, MEF,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		10	sORFs_org_Mouse

53194

189

CTG...

LVF...

CTG

ncRNA
sORF

B_cell, Brain, Liver,
MEF, Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		7	sORFs_org_Mouse

893252

261

AGG...

RAG...

AGG

Intronic
sORF
ncRNA

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
139919	ENSMUST00000198936	Selenof-206	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

55298

CTG...

LRM...

CTG

Alternative
InCDS
Overlapping
sORF

BMDC, Brain, E14,
Liver, MEF, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
54893	ENSMUST00000106211	Selenof-202	protein_coding	Ribo-seq		6	sORFs_org_Mouse

54522

105

CTG...

LKI...

CTG

Alternative
Overlapping
sORF
Upstream
ncRNA

BMDC, Brain, Liver,
3T3, MEF, NSC,
R1E, B_cell, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
54893	ENSMUST00000106211	Selenof-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		6	sORFs_org_Mouse

54078

183

TTG...

LGF...

TTG

ncRNA
sORF

B_cell, Brain, E14,
Liver, MEF, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		8	sORFs_org_Mouse

53518

TTG...

LSE...

TTG

sORF
ncRNA
Alternative
InCDS
Overlapping

3T3, E14, Liver,
MEF, Neutrophil, NSC,
Spleen_B_cell, v6-5, B_cell,
Brain, Testis, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
16732	ENSMUST00000151086	Selenof-204	protein_coding	Ribo-seq	weak	10	sORFs_org_Mouse
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		4	sORFs_org_Mouse
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

52527

GTG...

VEE...

GTG

ncRNA
sORF
Alternative
Downstream

B_cell, Brain, Spleen_B_cell,
Testis, BMDC, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq	strong	4	sORFs_org_Mouse
54893	ENSMUST00000106211	Selenof-202	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse

894519

249

GTG...

VAA...

GTG

Intronic
sORF
ncRNA

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
139919	ENSMUST00000198936	Selenof-206	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1219389

ATC...

ILF...

ATC

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

143772

CTG...

LRM...

CTG

Alternative
InCDS
Overlapping
sORF
ncRNA

Brain, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

16903

TTG...

LGR...

TTG

sORF
ncRNA
Intronic

3T3, E14, MEF,
Neutrophil, NSC, Skin_tumor,
v6-5, B_cell, Brain,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
16732	ENSMUST00000151086	Selenof-204	protein_coding	Ribo-seq		8	sORFs_org_Mouse
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
51809	ENSMUST00000198279	Selenof-205	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse

54260

126

CTG...

LLP...

CTG

ncRNA
sORF

Brain, E14, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

1217961

AGG...

RKK...

AGG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

55040

159

TTG...

LGF...

TTG

ncRNA
sORF

3T3, B_cell, Brain,
E14, Liver, MEF,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		10	sORFs_org_Mouse

53743

CTG...

LYA...

CTG

sORF
ncRNA
Intronic

3T3, E14, MEF,
Neutrophil, NSC, v6-5,
B_cell, Brain, Liver,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
16732	ENSMUST00000151086	Selenof-204	protein_coding	Ribo-seq	moderate	8	sORFs_org_Mouse
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
51809	ENSMUST00000198279	Selenof-205	retained_intron	Ribo-seq	weak	5	sORFs_org_Mouse

52014

129

CTG...

LFH...

CTG

ncRNA
sORF

B_cell, Brain, MEF,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		5	sORFs_org_Mouse

53552

TTG...

LDS...

TTG

sORF
ncRNA
Alternative
InCDS
Overlapping

3T3, E14, Liver,
MEF, Neutrophil, NSC,
Spleen_B_cell, v6-5, B_cell,
Brain, Testis, R1E,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
16732	ENSMUST00000151086	Selenof-204	protein_coding	Ribo-seq		10	sORFs_org_Mouse
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		4	sORFs_org_Mouse
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
54893	ENSMUST00000106211	Selenof-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

54892

ATG...

MKI...

ATG

Alternative
InCDS
Overlapping
sORF

BMDC, Brain, E14,
Liver, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
54893	ENSMUST00000106211	Selenof-202	protein_coding	Ribo-seq		5	sORFs_org_Mouse

53651

150

TTG...

LRQ...

TTG

Alternative
InCDS
Overlapping
sORF
ncRNA

BMDC, Liver, MEF,
3T3, Brain, E14,
Neutrophil, NSC, R1E,
v6-5, B_cell, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
54893	ENSMUST00000106211	Selenof-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq		10	sORFs_org_Mouse
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		7	sORFs_org_Mouse

144521

ATG...

MKI...

ATG

Alternative
InCDS
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

54632

GTG...

VGG...

GTG

Intronic
sORF
ncRNA
Alternative
InCDS
Overlapping

3T3, Brain, B_cell,
Liver, MEF, Spleen_B_cell,
Testis, E14, Neutrophil,
NSC, R1E, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
139919	ENSMUST00000198936	Selenof-206	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		6	sORFs_org_Mouse
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq		7	sORFs_org_Mouse
54893	ENSMUST00000106211	Selenof-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

55059

195

CTG...

LGA...

CTG

ncRNA
sORF

3T3, B_cell, Brain,
E14, Liver, MEF,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		10	sORFs_org_Mouse

972654

285

ACG...

TAD...

ACG

Alternative
Overlapping
sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

895183

AGG...

RVG...

AGG

Intronic
sORF
ncRNA

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
139919	ENSMUST00000198936	Selenof-206	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

52440

117

CTG...

LDP...

CTG

ncRNA
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

553

GTG...

VIN...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Skin_tumor, Spleen_B_cell,
Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq		18	sORFs_org_Mouse

55259

141

TTG...

LLC...

TTG

ncRNA
sORF

3T3, B_cell, Brain,
Liver, MEF, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

16731

GTG...

VIN...

GTG

ncRNA
sORF
Alternative
InCDS
Overlapping

B_cell, Brain, E14,
Testis, 3T3, Liver,
MEF, Neutrophil, NSC,
Skin_tumor, Spleen_B_cell, v6-5,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		5	sORFs_org_Mouse
16732	ENSMUST00000151086	Selenof-204	protein_coding	Ribo-seq	moderate	9	sORFs_org_Mouse
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

54062

219

CTG...

LGA...

CTG

ncRNA
sORF

B_cell, Brain, E14,
Liver, MEF, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		8	sORFs_org_Mouse

1218182

ATG...

MKI...

ATG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

53345

165

TTG...

LLC...

TTG

ncRNA
sORF

B_cell, Brain, Liver,
MEF, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		6	sORFs_org_Mouse

1222386

CTG...

LRM...

CTG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

54733

216

TTG...

LCN...

TTG

ncRNA
sORF

B_cell, Brain, Liver,
MEF, Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		7	sORFs_org_Mouse

894444

138

TTG...

LLL...

TTG

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
139919	ENSMUST00000198936	Selenof-206	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

747807

105

GTG...

VEH...

GTG

Downstream
Overlapping
sORF

3T3, BMDC, E14,
NSC, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
554	ENSMUST00000082437	Selenof-201	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse

55300

CTG...

LDP...

CTG

ncRNA
sORF

3T3, B_cell, Brain,
Liver, MEF, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

55386

207

TTG...

LGR...

TTG

ncRNA
sORF

3T3, B_cell, Brain,
E14, Liver, MEF,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52015	ENSMUST00000144859	Selenof-203	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

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