Gene NCBI:76799 | MetamORF

Gene

ID CARD

NCBI:76799

Aliases

1500002D11Rik
2510006D16Rik, 4933407D05Rik, ENSMUSG00000028797
MGI:1924049, NCBI:76799, OFF:Tmem234
Tmem234

Chromosome

Transcripts

32 ORFs
17 known transcripts
166 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

1015374

ENSMUST00000127919

Tmem234-202

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1555711	78	CTG ...	LTL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain
55776	180	GTG ...	VLV ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain
57660	192	GTG ...	VLA ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain
899024	57	AGG ...	RCL ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	E14
156644	60	GTG ...	VGW ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain
57169	174	GTG ...	VAA ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain
58486	177	CTG ...	LVA ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain
56148	111	GTG ...	VRE ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain
57472	183	CTG ...	LVL ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain, E14
59438	120	CTG ...	LEQ ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain, E14
57684	84	CTG ...	LLQ ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain
148685	51	GTG ...	VGL ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
59320	165	CTG ...	LWG ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain, E14
59046	51	TTG ...	LLW ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, E14
152222	45	CTG ...	LAA ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
58496	141	CTG ...	LKR ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain, E14
59307	144	CTG ...	LLK ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain
58045	81	TTG ...	LQE ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain

154268

ENSMUST00000174350

Tmem234-218

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
56014	54	GTG ...	VCI ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
57472	183	CTG ...	LVL ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
157812	45	GTG ...	VRL ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
56250	36	GTG ...	VSK ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
156644	60	GTG ...	VGW ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
152222	45	CTG ...	LAA ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
157240	39	GTG ...	VSG ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Intronic sORF	Liver, Spleen_B_cell
59010	90	GTG ...	VAG ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Intronic sORF	Brain, Spleen_B_cell
57169	174	GTG ...	VAA ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
58496	141	CTG ...	LKR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
148685	51	GTG ...	VGL ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
57684	84	CTG ...	LLQ ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
56148	111	GTG ...	VRE ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
57660	192	GTG ...	VLA ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
56753	78	GTG ...	VLT ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
58045	81	TTG ...	LQE ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
55776	180	GTG ...	VLV ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
58486	177	CTG ...	LVA ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
59320	165	CTG ...	LWG ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
59046	51	TTG ...	LLW ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
59307	144	CTG ...	LLK ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell
59438	120	CTG ...	LEQ ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	Spleen_B_cell

1016549

ENSMUST00000145345

Tmem234-207

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
58045	81	TTG ...	LQE ...	Ribo-seq	TTG		1	sORFs_org_Mouse	NMD sORF	R1E
152222	45	CTG ...	LAA ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	NMD sORF	R1E
57472	183	CTG ...	LVL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	R1E
59307	144	CTG ...	LLK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	R1E
157812	45	GTG ...	VRL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	R1E
57684	84	CTG ...	LLQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	R1E
56753	78	GTG ...	VLT ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	NMD sORF	Brain, R1E
58496	141	CTG ...	LKR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	R1E
56014	54	GTG ...	VCI ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	NMD sORF	R1E
56148	111	GTG ...	VRE ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	R1E
55776	180	GTG ...	VLV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	R1E
57660	192	GTG ...	VLA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	R1E
56250	36	GTG ...	VSK ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	NMD sORF	R1E
57169	174	GTG ...	VAA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	R1E
58486	177	CTG ...	LVA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	R1E
59010	90	GTG ...	VAG ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	NMD sORF	Brain, R1E
148685	51	GTG ...	VGL ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	NMD sORF	R1E
59320	165	CTG ...	LWG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	R1E
59438	120	CTG ...	LEQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	R1E

1080732

ENSMUST00000150110

Tmem234-208

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
57169	174	GTG ...	VAA ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, Liver, v6-5
58496	141	CTG ...	LKR ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, Liver, v6-5
57472	183	CTG ...	LVL ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14, Liver, v6-5
58486	177	CTG ...	LVA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, Liver, v6-5
59438	120	CTG ...	LEQ ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, Liver, v6-5
57660	192	GTG ...	VLA ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14, Liver, v6-5
156644	60	GTG ...	VGW ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Liver
57684	84	CTG ...	LLQ ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14, Liver, v6-5
152222	45	CTG ...	LAA ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
56148	111	GTG ...	VRE ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, Liver, v6-5
59320	165	CTG ...	LWG ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, Liver, v6-5
55776	180	GTG ...	VLV ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, Liver, v6-5
148685	51	GTG ...	VGL ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14, v6-5
59307	144	CTG ...	LLK ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14, Liver, v6-5
157812	45	GTG ...	VRL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, Liver
58045	81	TTG ...	LQE ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, Liver, v6-5

145876

ENSMUST00000137090

Tmem234-205

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
157812	45	GTG ...	VRL ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain
151639	105	TTG ...	LLR ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Downstream NMD sORF	Brain, MEF
58486	177	CTG ...	LVA ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain
58496	141	CTG ...	LKR ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain, MEF
56148	111	GTG ...	VRE ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain, MEF
148685	51	GTG ...	VGL ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, MEF
56014	54	GTG ...	VCI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
151146	75	CTG ...	LQL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Downstream NMD sORF	Brain, MEF
149701	42	CTG ...	LCP ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain, MEF
156644	60	GTG ...	VGW ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain
59320	165	CTG ...	LWG ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain
57660	192	GTG ...	VLA ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain
59307	144	CTG ...	LLK ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain, MEF
57684	84	CTG ...	LLQ ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain
58045	81	TTG ...	LQE ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain
59046	51	TTG ...	LLW ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, MEF
55776	180	GTG ...	VLV ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain
56250	36	GTG ...	VSK ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
59010	90	GTG ...	VAG ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
59438	120	CTG ...	LEQ ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain, MEF
57169	174	GTG ...	VAA ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain
155281	69	CTG ...	LCI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain
157240	39	GTG ...	VSG ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, MEF
152222	45	CTG ...	LAA ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain, MEF
57472	183	CTG ...	LVL ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Brain
56753	78	GTG ...	VLT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF

547975

ENSMUST00000173758

Tmem234-215

protein_coding

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

151146

CTG ...

LQL ...

Ribo-seq

CTG

sORFs_org_Mouse

3T3

896451

ENSMUST00000174610

Tmem234-219

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
58496	141	CTG ...	LKR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	NMD sORF	BMDC
898665	45	AAG ...	KCV ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	NMD sORF	BMDC
899024	57	AGG ...	RCL ...	Ribo-seq	AGG		1	sORFs_org_Mouse	NMD sORF	BMDC
57472	183	CTG ...	LVL ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	NMD sORF	BMDC

1058541

ENSMUST00000151969

Tmem234-209

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
56753	78	GTG ...	VLT ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF, Neutrophil, NSC
57472	183	CTG ...	LVL ...	Ribo-seq	CTG	strong	4	sORFs_org_Mouse	Alternative CDS NMD sORF	MEF, Neutrophil, NSC
58045	81	TTG ...	LQE ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Alternative CDS NMD sORF	MEF, Neutrophil
151639	105	TTG ...	LLR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Downstream NMD sORF	MEF
148685	51	GTG ...	VGL ...	Ribo-seq	GTG	strong	4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, Neutrophil, NSC
152222	45	CTG ...	LAA ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF, NSC
57660	192	GTG ...	VLA ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	Alternative CDS NMD sORF	MEF, Neutrophil, NSC
59438	120	CTG ...	LEQ ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	Alternative CDS NMD sORF	MEF, Neutrophil
57684	84	CTG ...	LLQ ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative CDS NMD sORF	MEF, Neutrophil
55776	180	GTG ...	VLV ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	Alternative CDS NMD sORF	MEF, Neutrophil, NSC
151146	75	CTG ...	LQL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Downstream NMD sORF	MEF
57169	174	GTG ...	VAA ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	Alternative CDS NMD sORF	MEF, Neutrophil, NSC
59010	90	GTG ...	VAG ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF, Neutrophil, NSC
157240	39	GTG ...	VSG ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	MEF, NSC
1376787	54	CTG ...	LAW ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	NSC
56148	111	GTG ...	VRE ...	Ribo-seq	GTG	weak	3	sORFs_org_Mouse	Alternative CDS NMD sORF	MEF, Neutrophil
59307	144	CTG ...	LLK ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Alternative CDS NMD sORF	MEF, Neutrophil
58486	177	CTG ...	LVA ...	Ribo-seq	CTG	strong	4	sORFs_org_Mouse	Alternative CDS NMD sORF	MEF, Neutrophil, NSC
149701	42	CTG ...	LCP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
59320	165	CTG ...	LWG ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Alternative CDS NMD sORF	MEF, Neutrophil, NSC
56014	54	GTG ...	VCI ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
58496	141	CTG ...	LKR ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Alternative CDS NMD sORF	MEF, Neutrophil

1464711

ENSMUST00000173937

Tmem234-216

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
152222	45	CTG ...	LAA ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC
59320	165	CTG ...	LWG ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative CDS NMD sORF	BMDC
58486	177	CTG ...	LVA ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative CDS NMD sORF	BMDC
55776	180	GTG ...	VLV ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative CDS NMD sORF	BMDC
57169	174	GTG ...	VAA ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative CDS NMD sORF	BMDC
157240	39	GTG ...	VSG ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	BMDC
56753	78	GTG ...	VLT ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC
56014	54	GTG ...	VCI ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC
58496	141	CTG ...	LKR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative CDS NMD sORF	BMDC
59010	90	GTG ...	VAG ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC
56148	111	GTG ...	VRE ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative CDS NMD sORF	BMDC
59438	120	CTG ...	LEQ ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative CDS NMD sORF	BMDC

148228

ENSMUST00000172774

Tmem234-212

nonsense_mediated_decay

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

ORF annotations

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

56014

GTG ...

VCI ...

Ribo-seq

GTG

moderate

sORFs_org_Mouse

Brain

823670

ENSMUST00000181579

Tmem234-221

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
148685	51	GTG ...	VGL ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	sORF	B_cell

162425

ENSMUST00000102591

Tmem234-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
151146	75	CTG ...	LQL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	v6-5
162424	99	CTG ...	LGA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF, Spleen_B_cell
1376787	54	CTG ...	LAW ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14

56015

ENSMUST00000129515

Tmem234-203

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
59010	90	GTG ...	VAG ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Testis
57684	84	CTG ...	LLQ ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Testis
58496	141	CTG ...	LKR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Testis
59307	144	CTG ...	LLK ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Testis
56250	36	GTG ...	VSK ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Testis
56753	78	GTG ...	VLT ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Testis
57660	192	GTG ...	VLA ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Testis
59046	51	TTG ...	LLW ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Testis
897888	30	ATC ...	IRV ...	Ribo-seq	ATC	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	BMDC
56014	54	GTG ...	VCI ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Testis

55777

ENSMUST00000135628

Tmem234-204

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
59320	165	CTG ...	LWG ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Testis
56148	111	GTG ...	VRE ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Testis
59438	120	CTG ...	LEQ ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Testis
58486	177	CTG ...	LVA ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Testis
58045	81	TTG ...	LQE ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Testis
55776	180	GTG ...	VLV ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Testis
57169	174	GTG ...	VAA ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Testis
57472	183	CTG ...	LVL ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative CDS NMD sORF	Testis

153541

ENSMUST00000174819

Tmem234-220

nonsense_mediated_decay

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

ORF annotations

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

56753

GTG ...

VLT ...

Ribo-seq

GTG

moderate

sORFs_org_Mouse

Brain

868063

ENSMUST00000174073

Tmem234-217

nonsense_mediated_decay

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

ORF annotations

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

157240

GTG ...

VSG ...

Ribo-seq

GTG

weak

sORFs_org_Mouse

Liver

821973

ENSMUST00000152126

Tmem234-210

nonsense_mediated_decay

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

ORF annotations

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

56014

GTG ...

VCI ...

Ribo-seq

GTG

moderate

sORFs_org_Mouse

B_cell

ORFs

32 ORFs
17 known transcripts
166 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

1555711

CTG...

LTL...

CTG

InCDS
NMD
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

56014

GTG...

VCI...

GTG

Intronic
sORF
Alternative
Downstream
NMD

Spleen_B_cell, Brain, MEF,
R1E, BMDC, Testis,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
148228	ENSMUST00000172774	Tmem234-212	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
1464711	ENSMUST00000173937	Tmem234-216	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
56015	ENSMUST00000129515	Tmem234-203	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
821973	ENSMUST00000152126	Tmem234-210	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

58045

TTG...

LQE...

TTG

NMD
sORF
Alternative
CDS
Intronic
InCDS
Overlapping

R1E, MEF, Neutrophil,
Testis, Spleen_B_cell, Brain,
E14, Liver, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
55777	ENSMUST00000135628	Tmem234-204	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
1080732	ENSMUST00000150110	Tmem234-208	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

57169

174

GTG...

VAA...

GTG

Alternative
InCDS
NMD
Overlapping
sORF
CDS
Intronic

E14, Liver, v6-5,
Brain, Spleen_B_cell, BMDC,
MEF, Neutrophil, NSC,
R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1080732	ENSMUST00000150110	Tmem234-208	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
1464711	ENSMUST00000173937	Tmem234-216	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	moderate	4	sORFs_org_Mouse
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
55777	ENSMUST00000135628	Tmem234-204	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

57472

183

CTG...

LVL...

CTG

Intronic
sORF
NMD
Alternative
CDS
InCDS
Overlapping

Spleen_B_cell, R1E, MEF,
Neutrophil, NSC, BMDC,
E14, Liver, v6-5,
Brain, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	strong	4	sORFs_org_Mouse
1080732	ENSMUST00000150110	Tmem234-208	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	strong	3	sORFs_org_Mouse
55777	ENSMUST00000135628	Tmem234-204	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
896451	ENSMUST00000174610	Tmem234-219	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

157812

GTG...

VRL...

GTG

Alternative
CDS
NMD
sORF
Intronic
InCDS
Overlapping

Brain, Spleen_B_cell, R1E,
E14, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1080732	ENSMUST00000150110	Tmem234-208	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

58496

141

CTG...

LKR...

CTG

Alternative
InCDS
NMD
Overlapping
sORF
CDS
Intronic

E14, Liver, v6-5,
BMDC, Brain, MEF,
R1E, Spleen_B_cell, Testis,
Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1080732	ENSMUST00000150110	Tmem234-208	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
896451	ENSMUST00000174610	Tmem234-219	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
56015	ENSMUST00000129515	Tmem234-203	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
1464711	ENSMUST00000173937	Tmem234-216	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	weak	3	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	weak	3	sORFs_org_Mouse

55776

180

GTG...

VLV...

GTG

Alternative
CDS
NMD
sORF
InCDS
Overlapping
Intronic

Brain, MEF, Neutrophil,
NSC, BMDC, R1E,
E14, Liver, v6-5,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	weak	4	sORFs_org_Mouse
1464711	ENSMUST00000173937	Tmem234-216	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1080732	ENSMUST00000150110	Tmem234-208	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
55777	ENSMUST00000135628	Tmem234-204	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

152222

CTG...

LAA...

CTG

NMD
sORF
Alternative
InCDS
Overlapping
Intronic

R1E, BMDC, Spleen_B_cell,
MEF, NSC, E14,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
1464711	ENSMUST00000173937	Tmem234-216	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse
1080732	ENSMUST00000150110	Tmem234-208	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

151146

CTG...

LQL...

CTG

InCDS
Overlapping
sORF
Downstream
NMD

3T3, v6-5, Brain,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
547975	ENSMUST00000173758	Tmem234-215	protein_coding	Ribo-seq		1	sORFs_org_Mouse
162425	ENSMUST00000102591	Tmem234-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

151639

105

TTG...

LLR...

TTG

Downstream
NMD
sORF

Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

56250

GTG...

VSK...

GTG

Intronic
sORF
Alternative
Downstream
NMD

Brain, MEF, Testis,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
56015	ENSMUST00000129515	Tmem234-203	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

58486

177

CTG...

LVA...

CTG

Alternative
CDS
NMD
sORF
InCDS
Overlapping
Intronic

Brain, E14, Liver,
v6-5, BMDC, Testis,
Spleen_B_cell, R1E, MEF,
Neutrophil, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
1080732	ENSMUST00000150110	Tmem234-208	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse
1464711	ENSMUST00000173937	Tmem234-216	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
55777	ENSMUST00000135628	Tmem234-204	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	strong	4	sORFs_org_Mouse

56753

GTG...

VLT...

GTG

Alternative
Downstream
NMD
sORF
Intronic

MEF, Neutrophil, NSC,
Brain, R1E, Spleen_B_cell,
BMDC, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	moderate	3	sORFs_org_Mouse
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
1464711	ENSMUST00000173937	Tmem234-216	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
153541	ENSMUST00000174819	Tmem234-220	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
56015	ENSMUST00000129515	Tmem234-203	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

57660

192

GTG...

VLA...

GTG

Alternative
CDS
NMD
sORF
InCDS
Overlapping
Intronic

Brain, BMDC, E14,
Liver, v6-5, MEF,
Neutrophil, NSC, Spleen_B_cell,
R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
1080732	ENSMUST00000150110	Tmem234-208	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	weak	4	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
56015	ENSMUST00000129515	Tmem234-203	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

56148

111

GTG...

VRE...

GTG

Alternative
CDS
NMD
sORF
InCDS
Overlapping
Intronic

Brain, MEF, Testis,
R1E, E14, Liver,
v6-5, Spleen_B_cell, Neutrophil,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
55777	ENSMUST00000135628	Tmem234-204	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1080732	ENSMUST00000150110	Tmem234-208	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	weak	3	sORFs_org_Mouse
1464711	ENSMUST00000173937	Tmem234-216	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

899024

AGG...

RCL...

AGG

InCDS
NMD
Overlapping
sORF

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
896451	ENSMUST00000174610	Tmem234-219	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

59438

120

CTG...

LEQ...

CTG

Alternative
InCDS
NMD
Overlapping
sORF
CDS
Intronic

E14, Liver, v6-5,
MEF, Neutrophil, Testis,
Brain, Spleen_B_cell, R1E,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1080732	ENSMUST00000150110	Tmem234-208	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	strong	3	sORFs_org_Mouse
55777	ENSMUST00000135628	Tmem234-204	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	strong	3	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1464711	ENSMUST00000173937	Tmem234-216	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

156644

GTG...

VGW...

GTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

Brain, Spleen_B_cell, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
1080732	ENSMUST00000150110	Tmem234-208	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

59307

144

CTG...

LLK...

CTG

NMD
sORF
Alternative
CDS
InCDS
Overlapping
Intronic

R1E, Testis, Brain,
MEF, Neutrophil, BMDC,
E14, Liver, v6-5,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
56015	ENSMUST00000129515	Tmem234-203	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	weak	3	sORFs_org_Mouse
1080732	ENSMUST00000150110	Tmem234-208	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse

148685

GTG...

VGL...

GTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

Brain, MEF, B_cell,
Neutrophil, NSC, Spleen_B_cell,
BMDC, E14, v6-5,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse
823670	ENSMUST00000181579	Tmem234-221	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	strong	4	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
1080732	ENSMUST00000150110	Tmem234-208	nonsense_mediated_decay	Ribo-seq	strong	3	sORFs_org_Mouse
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

898665

AAG...

KCV...

AAG

NMD
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
896451	ENSMUST00000174610	Tmem234-219	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

162424

CTG...

LGA...

CTG

Alternative
InCDS
Overlapping
sORF

Brain, MEF, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
162425	ENSMUST00000102591	Tmem234-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

157240

GTG...

VSG...

GTG

Intronic
sORF
InCDS
NMD
Overlapping

Liver, Spleen_B_cell, BMDC,
MEF, NSC, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
1464711	ENSMUST00000173937	Tmem234-216	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
868063	ENSMUST00000174073	Tmem234-217	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

57684

CTG...

LLQ...

CTG

NMD
sORF
Alternative
CDS
InCDS
Overlapping
Intronic

R1E, Testis, BMDC,
E14, Liver, v6-5,
MEF, Neutrophil, Spleen_B_cell,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
56015	ENSMUST00000129515	Tmem234-203	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
1080732	ENSMUST00000150110	Tmem234-208	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse

59010

GTG...

VAG...

GTG

Alternative
Downstream
NMD
sORF
Intronic

Testis, Brain, Spleen_B_cell,
MEF, Neutrophil, NSC,
R1E, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
56015	ENSMUST00000129515	Tmem234-203	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	strong	3	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse
1464711	ENSMUST00000173937	Tmem234-216	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

59320

165

CTG...

LWG...

CTG

Alternative
CDS
NMD
sORF
InCDS
Overlapping
Intronic

Testis, BMDC, E14,
Liver, v6-5, Brain,
Spleen_B_cell, MEF, Neutrophil,
NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
55777	ENSMUST00000135628	Tmem234-204	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
1464711	ENSMUST00000173937	Tmem234-216	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
1080732	ENSMUST00000150110	Tmem234-208	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	moderate	3	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	moderate	4	sORFs_org_Mouse
1016549	ENSMUST00000145345	Tmem234-207	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

149701

CTG...

LCP...

CTG

Alternative
Downstream
NMD
sORF

Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

1376787

CTG...

LAW...

CTG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

E14, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
162425	ENSMUST00000102591	Tmem234-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
1058541	ENSMUST00000151969	Tmem234-209	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

59046

TTG...

LLW...

TTG

InCDS
NMD
Overlapping
sORF
Intronic

Brain, MEF, E14,
Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
1015374	ENSMUST00000127919	Tmem234-202	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
154268	ENSMUST00000174350	Tmem234-218	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
56015	ENSMUST00000129515	Tmem234-203	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

155281

CTG...

LCI...

CTG

Alternative
Downstream
NMD
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145876	ENSMUST00000137090	Tmem234-205	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

897888

ATC...

IRV...

ATC

Alternative
Downstream
NMD
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
56015	ENSMUST00000129515	Tmem234-203	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

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