Gene NCBI:76238 | MetamORF

Gene

ID CARD

NCBI:76238

Aliases

1110059D05Rik
6430629L09Rik, ENSMUSG00000035637, Glxr
Grhpr, MGI:1923488, NCBI:76238
OFF:Grhpr

Chromosome

Transcripts

49 ORFs
6 known transcripts
98 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

513362

ENSMUST00000150394

Grhpr-204

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
56869	63	TTG ...	LLC ...	Ribo-seq	TTG		4	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, v6-5
984672	72	CTG ...	LHN ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	E14, v6-5
149154	60	GTG ...	VRL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	MEF, v6-5
984317	150	GTG ...	VRW ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	MEF
56424	45	TTG ...	LPA ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	E14
160370	87	CTG ...	LEL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	MEF, Spleen_B_cell, v6-5
158459	66	ATG ...	MDV ...	Ribo-seq	ATG		2	sORFs_org_Mouse	ncRNA sORF	MEF, v6-5
155869	78	ATG ...	MAC ...	Ribo-seq	ATG		1	sORFs_org_Mouse	ncRNA sORF	MEF
55702	30	TTG ...	LAL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	Neutrophil
59516	39	GTG ...	VDK ...	Ribo-seq	GTG		6	sORFs_org_Mouse	ncRNA sORF	E14, MEF, Neutrophil, v6-5
145688	57	CTG ...	LTV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	MEF
1656452	51	GTG ...	VWT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	MEF
55898	51	TTG ...	LSV ...	Ribo-seq	TTG		4	sORFs_org_Mouse	ncRNA sORF	E14, MEF, Neutrophil, v6-5
155838	78	CTG ...	LEP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell, v6-5
57352	135	GTG ...	VEQ ...	Ribo-seq	GTG		4	sORFs_org_Mouse	ncRNA sORF	E14, MEF, Neutrophil, v6-5
57550	111	CTG ...	LKP ...	Ribo-seq	CTG		4	sORFs_org_Mouse	ncRNA sORF	E14, Neutrophil, NSC, v6-5
59373	111	GTG ...	VGY ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	E14
868407	114	CTG ...	LLI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	MEF
57844	33	TTG ...	LPE ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	Neutrophil
58102	90	CTG ...	LTD ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	E14
974026	270	GTG ...	VFV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	Liver
57536	63	GTG ...	VFV ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	E14, NSC
983949	162	TTG ...	LLP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	MEF
56407	78	GTG ...	VGA ...	Ribo-seq	GTG		3	sORFs_org_Mouse	ncRNA sORF	E14, MEF, v6-5
1427671	75	ATG ...	MNL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	ncRNA sORF	Liver
57895	93	CTG ...	LEQ ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	E14, MEF, v6-5
56642	81	GTG ...	VVG ...	Ribo-seq	GTG		4	sORFs_org_Mouse	ncRNA sORF	Brain, E14, MEF, v6-5
984588	126	ATG ...	MTP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	ncRNA sORF	MEF
59529	45	GTG ...	VGV ...	Ribo-seq	GTG		5	sORFs_org_Mouse	ncRNA sORF	E14, MEF, Neutrophil, Spleen_B_cell, v6-5

145689

ENSMUST00000045078

Grhpr-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
155869	78	ATG ...	MAC ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
149154	60	GTG ...	VRL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, R1E
553130	33	GTG ...	VVR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
145688	57	CTG ...	LTV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
545017	72	TTG ...	LAV ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Liver
516106	177	CTG ...	LLL ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver, NSC, R1E, Spleen_B_cell, v6-5
550641	66	GTG ...	VPP ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Liver
162250	78	CTG ...	LWG ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Liver, R1E
869818	51	ATG ...	MKS ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
160370	87	CTG ...	LEL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, R1E
984588	126	ATG ...	MTP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
158459	66	ATG ...	MDV ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, R1E
826578	147	CTG ...	LQQ ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Liver, NSC, v6-5
155838	78	CTG ...	LEP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, R1E

55703

ENSMUST00000151631

Grhpr-206

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
56869	63	TTG ...	LLC ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver, Testis
984588	126	ATG ...	MTP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Liver
158459	66	ATG ...	MDV ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver
155838	78	CTG ...	LEP ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver
1428996	141	GTG ...	VGA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Liver
56424	45	TTG ...	LPA ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Testis
57844	33	TTG ...	LPE ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver, Testis
56407	78	GTG ...	VGA ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver, Testis
57550	111	CTG ...	LKP ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver, Testis
55702	30	TTG ...	LAL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Testis
59373	111	GTG ...	VGY ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver, Testis
983949	162	TTG ...	LLP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Liver
58102	90	CTG ...	LTD ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver, Testis
57536	63	GTG ...	VFV ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver, Testis
59529	45	GTG ...	VGV ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver, Testis
149154	60	GTG ...	VRL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver
984672	72	CTG ...	LHN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Liver
55898	51	TTG ...	LSV ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver, Testis
57895	93	CTG ...	LEQ ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver, Testis
984317	150	GTG ...	VRW ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Liver
160370	87	CTG ...	LEL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver
56642	81	GTG ...	VVG ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver, Testis
57352	135	GTG ...	VEQ ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Liver, Testis
59516	39	GTG ...	VDK ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Testis
1427746	174	GTG ...	VLQ ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Liver
984578	177	TTG ...	LSG ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Liver

161851

ENSMUST00000143589

Grhpr-203

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
161850	81	ATG ...	MDV ...	Ribo-seq	ATG		7	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain, Liver, MEF, R1E, v6-5
59373	111	GTG ...	VGY ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
55702	30	TTG ...	LAL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	ncRNA sORF	3T3, Spleen_B_cell
158459	66	ATG ...	MDV ...	Ribo-seq	ATG		3	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Liver
165216	75	GTG ...	VRL ...	Ribo-seq	GTG		7	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain, Liver, MEF, R1E, v6-5
164256	246	CTG ...	LAA ...	Ribo-seq	CTG		4	sORFs_org_Mouse	ncRNA sORF	Brain, Liver, R1E
160370	87	CTG ...	LEL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Liver
166258	93	CTG ...	LEP ...	Ribo-seq	CTG		6	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain, Liver, R1E, v6-5
57844	33	TTG ...	LPE ...	Ribo-seq	TTG		2	sORFs_org_Mouse	ncRNA sORF	B_cell, Liver
57550	111	CTG ...	LKP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	BMDC
58102	90	CTG ...	LTD ...	Ribo-seq	CTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, Liver
59529	45	GTG ...	VGV ...	Ribo-seq	GTG		2	sORFs_org_Mouse	ncRNA sORF	3T3, Liver
164783	147	CTG ...	LPP ...	Ribo-seq	CTG		5	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain, Liver, v6-5
149154	60	GTG ...	VRL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Liver
55898	51	TTG ...	LSV ...	Ribo-seq	TTG		3	sORFs_org_Mouse	ncRNA sORF	3T3, Liver, Spleen_B_cell
868407	114	CTG ...	LLI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Liver
869246	30	CTG ...	LLA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Liver
164695	102	CTG ...	LEL ...	Ribo-seq	CTG		7	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Brain, Liver, MEF, R1E, v6-5
155838	78	CTG ...	LEP ...	Ribo-seq	CTG		3	sORFs_org_Mouse	ncRNA sORF	3T3, B_cell, Liver

413868

ENSMUST00000128973

Grhpr-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
57352	135	GTG ...	VEQ ...	Ribo-seq	GTG		4	sORFs_org_Mouse	sORF	Brain, Liver, Spleen_B_cell
57895	93	CTG ...	LEQ ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF	Brain, Liver
413867	213	CTG ...	LVR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	C2C12
59516	39	GTG ...	VDK ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF	Liver
56869	63	TTG ...	LLC ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	Liver
56642	81	GTG ...	VVG ...	Ribo-seq	GTG		3	sORFs_org_Mouse	sORF	Liver, Spleen_B_cell
57536	63	GTG ...	VFV ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	sORF	Brain
56407	78	GTG ...	VGA ...	Ribo-seq	GTG		3	sORFs_org_Mouse	sORF	Brain, Liver

1427865

ENSMUST00000151148

Grhpr-205

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1428802	126	CTG ...	LLL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Liver
1427864	96	CTG ...	LQQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Liver

ORFs

49 ORFs
6 known transcripts
98 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

56869

TTG...

LLC...

TTG

ncRNA
sORF
InCDS
NMD
Overlapping

Brain, E14, MEF,
v6-5, Liver, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		4	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
413868	ENSMUST00000128973	Grhpr-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

984672

CTG...

LHN...

CTG

ncRNA
sORF
Alternative
InCDS
NMD
Overlapping

E14, v6-5, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

155869

ATG...

MAC...

ATG

Alternative
InCDS
Overlapping
sORF
ncRNA

Brain, R1E, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145689	ENSMUST00000045078	Grhpr-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

149154

GTG...

VRL...

GTG

ncRNA
sORF
InCDS
Overlapping
NMD

MEF, v6-5, Brain,
R1E, Liver, 3T3,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
145689	ENSMUST00000045078	Grhpr-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

984317

150

GTG...

VRW...

GTG

ncRNA
sORF
Alternative
InCDS
NMD
Overlapping

MEF, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

161850

ATG...

MDV...

ATG

ncRNA
sORF

3T3, B_cell, Brain,
Liver, MEF, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		7	sORFs_org_Mouse

59373

111

GTG...

VGY...

GTG

ncRNA
sORF
InCDS
NMD
Overlapping

Brain, Liver, Testis,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

56424

TTG...

LPA...

TTG

ncRNA
sORF
InCDS
NMD
Overlapping

E14, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

57352

135

GTG...

VEQ...

GTG

sORF
ncRNA
InCDS
NMD
Overlapping

Brain, Liver, Spleen_B_cell,
E14, MEF, Neutrophil,
v6-5, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
413868	ENSMUST00000128973	Grhpr-202	protein_coding	Ribo-seq		4	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		4	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

160370

CTG...

LEL...

CTG

ncRNA
sORF
InCDS
Overlapping
NMD

MEF, Spleen_B_cell, v6-5,
3T3, B_cell, Liver,
Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
145689	ENSMUST00000045078	Grhpr-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

553130

GTG...

VVR...

GTG

InCDS
Overlapping
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145689	ENSMUST00000045078	Grhpr-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

57895

CTG...

LEQ...

CTG

sORF
InCDS
NMD
Overlapping
ncRNA

Brain, Liver, Testis,
E14, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
413868	ENSMUST00000128973	Grhpr-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

1428802

126

CTG...

LLL...

CTG

sORF

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1427865	ENSMUST00000151148	Grhpr-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse

145688

CTG...

LTV...

CTG

Alternative
InCDS
Overlapping
sORF
ncRNA

Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145689	ENSMUST00000045078	Grhpr-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

413867

213

CTG...

LVR...

CTG

sORF

C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
413868	ENSMUST00000128973	Grhpr-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

545017

TTG...

LAV...

TTG

InCDS
Overlapping
sORF

3T3, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145689	ENSMUST00000045078	Grhpr-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

55702

TTG...

LAL...

TTG

ncRNA
sORF
InCDS
NMD
Overlapping

3T3, Spleen_B_cell, Neutrophil,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

158459

ATG...

MDV...

ATG

ncRNA
sORF
InCDS
NMD
Overlapping

3T3, B_cell, Liver,
MEF, v6-5, Brain,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
145689	ENSMUST00000045078	Grhpr-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

59516

GTG...

VDK...

GTG

sORF
ncRNA
InCDS
NMD
Overlapping

Liver, E14, MEF,
Neutrophil, v6-5, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
413868	ENSMUST00000128973	Grhpr-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		6	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

984588

126

ATG...

MTP...

ATG

Alternative
InCDS
NMD
Overlapping
sORF
ncRNA

Liver, R1E, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
145689	ENSMUST00000045078	Grhpr-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

516106

177

CTG...

LLL...

CTG

Alternative
InCDS
Overlapping
sORF

Liver, NSC, R1E,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145689	ENSMUST00000045078	Grhpr-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

165216

GTG...

VRL...

GTG

ncRNA
sORF

3T3, B_cell, Brain,
Liver, MEF, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		7	sORFs_org_Mouse

155838

CTG...

LEP...

CTG

InCDS
NMD
Overlapping
sORF
ncRNA

Liver, Spleen_B_cell, v6-5,
Brain, R1E, 3T3,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
145689	ENSMUST00000045078	Grhpr-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

164256

246

CTG...

LAA...

CTG

ncRNA
sORF

Brain, Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		4	sORFs_org_Mouse

1428996

141

GTG...

VGA...

GTG

Alternative
InCDS
NMD
Overlapping
sORF

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

166258

CTG...

LEP...

CTG

ncRNA
sORF

3T3, B_cell, Brain,
Liver, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		6	sORFs_org_Mouse

57844

TTG...

LPE...

TTG

ncRNA
sORF
InCDS
NMD
Overlapping

B_cell, Liver, Testis,
Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

56642

GTG...

VVG...

GTG

sORF
InCDS
NMD
Overlapping
ncRNA

Liver, Spleen_B_cell, Testis,
Brain, E14, MEF,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
413868	ENSMUST00000128973	Grhpr-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		4	sORFs_org_Mouse

1656452

GTG...

VWT...

GTG

ncRNA
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

57536

GTG...

VFV...

GTG

sORF
InCDS
NMD
Overlapping
ncRNA

Brain, Liver, Testis,
E14, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
413868	ENSMUST00000128973	Grhpr-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

56407

GTG...

VGA...

GTG

InCDS
NMD
Overlapping
sORF
ncRNA

Liver, Testis, E14,
MEF, v6-5, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		3	sORFs_org_Mouse
413868	ENSMUST00000128973	Grhpr-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

57550

111

CTG...

LKP...

CTG

ncRNA
sORF
InCDS
NMD
Overlapping

BMDC, Liver, Testis,
E14, Neutrophil, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		4	sORFs_org_Mouse

58102

CTG...

LTD...

CTG

ncRNA
sORF
InCDS
NMD
Overlapping

Brain, Liver, Testis,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

550641

GTG...

VPP...

GTG

InCDS
Overlapping
sORF

3T3, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145689	ENSMUST00000045078	Grhpr-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

55898

TTG...

LSV...

TTG

ncRNA
sORF
InCDS
NMD
Overlapping

E14, MEF, Neutrophil,
v6-5, Liver, Testis,
3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		4	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

983949

162

TTG...

LLP...

TTG

Alternative
InCDS
NMD
Overlapping
sORF
ncRNA

Liver, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

59529

GTG...

VGV...

GTG

ncRNA
sORF
InCDS
NMD
Overlapping

3T3, Liver, Testis,
E14, MEF, Neutrophil,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		2	sORFs_org_Mouse
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		5	sORFs_org_Mouse

162250

CTG...

LWG...

CTG

Alternative
InCDS
Overlapping
sORF

Brain, Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145689	ENSMUST00000045078	Grhpr-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

869818

ATG...

MKS...

ATG

Alternative
InCDS
Overlapping
sORF

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145689	ENSMUST00000045078	Grhpr-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

868407

114

CTG...

LLI...

CTG

ncRNA
sORF

MEF, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

974026

270

GTG...

VFV...

GTG

ncRNA
sORF

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

164783

147

CTG...

LPP...

CTG

ncRNA
sORF

3T3, B_cell, Brain,
Liver, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		5	sORFs_org_Mouse

1427864

CTG...

LQQ...

CTG

sORF

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1427865	ENSMUST00000151148	Grhpr-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1427671

ATG...

MNL...

ATG

ncRNA
sORF

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
513362	ENSMUST00000150394	Grhpr-204	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

869246

CTG...

LLA...

CTG

ncRNA
sORF

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse

826578

147

CTG...

LQQ...

CTG

Alternative
InCDS
Overlapping
sORF

B_cell, Liver, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
145689	ENSMUST00000045078	Grhpr-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse

1427746

174

GTG...

VLQ...

GTG

Alternative
InCDS
NMD
Overlapping
sORF

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

164695

102

CTG...

LEL...

CTG

ncRNA
sORF

3T3, B_cell, Brain,
Liver, MEF, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
161851	ENSMUST00000143589	Grhpr-203	processed_transcript	Ribo-seq		7	sORFs_org_Mouse

984578

177

TTG...

LSG...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
55703	ENSMUST00000151631	Grhpr-206	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

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