Gene NCBI:74035 | MetamORF

Gene

ID CARD

NCBI:74035

Aliases

4632412I24Rik
6030462G04Rik, AI449622, AW490720
ENSMUSG00000028948, MGI:1921285, NCBI:74035
Nol9, OFF:Nol9

Chromosome

Transcripts

75 ORFs
5 known transcripts
148 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

509863

ENSMUST00000131696

Nol9-204

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
511767	90	CTG ...	LGG ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	NMD sORF	Spleen_B_cell, v6-5
157655	48	CTG ...	LLA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	NMD sORF	MEF, Spleen_B_cell, v6-5
1080481	87	CTG ...	LCS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	v6-5
1177079	30	TTG ...	LKF ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	NMD sORF	E14, v6-5
1081071	90	CTG ...	LLC ...	Ribo-seq	CTG		2	sORFs_org_Mouse	NMD sORF	MEF, v6-5
1183	51	TTG ...	LPR ...	Ribo-seq	TTG		2	sORFs_org_Mouse	NMD sORF	MEF, v6-5
157621	279	CTG ...	LIR ...	Ribo-seq	CTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, Spleen_B_cell, v6-5
511972	87	ATG ...	MGF ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	NMD sORF	Spleen_B_cell
1177173	48	ATG ...	MSF ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	NMD sORF	v6-5
146160	84	GTG ...	VDD ...	Ribo-seq	GTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, Spleen_B_cell, v6-5
1178513	33	ATG ...	MYC ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	NMD sORF	E14, v6-5
509928	75	ATG ...	MKR ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	NMD sORF	E14, Spleen_B_cell, v6-5
1177155	33	ATG ...	MSF ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	NMD sORF	E14, v6-5
1082326	51	ATG ...	MTE ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	NMD sORF	v6-5
153158	210	CTG ...	LTS ...	Ribo-seq	CTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, Spleen_B_cell, v6-5
510677	75	CTG ...	LLC ...	Ribo-seq	CTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, Spleen_B_cell, v6-5
1177214	45	GTG ...	VAL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	v6-5
160961	75	CTG ...	LGQ ...	Ribo-seq	CTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, Spleen_B_cell, v6-5
154598	267	CTG ...	LSP ...	Ribo-seq	CTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, Spleen_B_cell, v6-5
1178110	45	TTG ...	LVP ...	Ribo-seq	TTG		2	sORFs_org_Mouse	NMD sORF	E14, v6-5
146123	117	GTG ...	VNA ...	Ribo-seq	GTG		5	sORFs_org_Mouse	NMD sORF	E14, Liver, MEF, Spleen_B_cell, v6-5
511420	285	GTG ...	VDL ...	Ribo-seq	GTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, Spleen_B_cell, v6-5
1176458	60	CTG ...	LSS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	NMD sORF	v6-5
512439	33	CTG ...	LPC ...	Ribo-seq	CTG		2	sORFs_org_Mouse	NMD sORF	Spleen_B_cell, v6-5
1176249	126	CTG ...	LYA ...	Ribo-seq	CTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, MEF, v6-5
149901	297	CTG ...	LRL ...	Ribo-seq	CTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, Spleen_B_cell, v6-5
512451	30	CTG ...	LIA ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	NMD sORF	Spleen_B_cell, v6-5
1178236	132	ATG ...	MFT ...	Ribo-seq	ATG		1	sORFs_org_Mouse	NMD sORF	v6-5
1178569	30	TTG ...	LES ...	Ribo-seq	TTG		1	sORFs_org_Mouse	NMD sORF	v6-5
1082619	78	TTG ...	LKV ...	Ribo-seq	TTG		2	sORFs_org_Mouse	NMD sORF	MEF, v6-5
1081746	57	TTG ...	LTW ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	NMD sORF	MEF, v6-5
159693	270	GTG ...	VLS ...	Ribo-seq	GTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, Spleen_B_cell, v6-5
149636	54	CTG ...	LLS ...	Ribo-seq	CTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, Spleen_B_cell, v6-5
1082740	33	GTG ...	VRV ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	NMD sORF	v6-5
1178171	36	GTG ...	VTL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	NMD sORF	E14, v6-5
1379443	48	CTG ...	LGP ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	NMD sORF	E14
512136	156	GTG ...	VYY ...	Ribo-seq	GTG		2	sORFs_org_Mouse	NMD sORF	E14, v6-5
1177465	30	CTG ...	LGR ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	NMD sORF	MEF, v6-5
1177558	93	GTG ...	VFR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	NMD sORF	v6-5
1176171	63	GTG ...	VPS ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	NMD sORF	v6-5
1115	33	GTG ...	VTV ...	Ribo-seq	GTG		2	sORFs_org_Mouse	NMD sORF	MEF, v6-5
1177788	96	CTG ...	LTL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	NMD sORF	MEF, v6-5
1081755	72	TTG ...	LSE ...	Ribo-seq	TTG		3	sORFs_org_Mouse	NMD sORF	E14, Liver, v6-5
512189	120	TTG ...	LKK ...	Ribo-seq	TTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, Spleen_B_cell, v6-5
154620	51	CTG ...	LSV ...	Ribo-seq	CTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, Spleen_B_cell, v6-5
1178576	69	ATG ...	MAA ...	Ribo-seq	ATG		2	sORFs_org_Mouse	NMD sORF	E14, v6-5
1177070	39	ATG ...	MPT ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	NMD sORF	v6-5
147811	156	TTG ...	LHA ...	Ribo-seq	TTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, MEF, v6-5
1176649	30	TTG ...	LRL ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	NMD sORF	MEF, v6-5
1082384	42	ATG ...	MPA ...	Ribo-seq	ATG	weak	2	sORFs_org_Mouse	NMD sORF	MEF, v6-5
154402	87	CTG ...	LEC ...	Ribo-seq	CTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, Spleen_B_cell, v6-5
1081528	72	ATG ...	MAC ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	NMD sORF	E14, v6-5
511413	72	TTG ...	LCG ...	Ribo-seq	TTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, Spleen_B_cell, v6-5
512316	39	CTG ...	LDM ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	NMD sORF	E14, Spleen_B_cell
154697	177	CTG ...	LYT ...	Ribo-seq	CTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, Spleen_B_cell, v6-5
1081220	135	TTG ...	LRL ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	NMD sORF	E14, v6-5
1082966	147	CTG ...	LPC ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	NMD sORF	E14, v6-5
152712	291	CTG ...	LLV ...	Ribo-seq	CTG		4	sORFs_org_Mouse	NMD sORF	E14, Liver, Spleen_B_cell, v6-5

838

ENSMUST00000084116

Nol9-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1115	33	GTG ...	VTV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Skin_tumor
1177155	33	ATG ...	MSF ...	Ribo-seq	ATG	moderate	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
509928	75	ATG ...	MKR ...	Ribo-seq	ATG	weak	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
1178513	33	ATG ...	MYC ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
512451	30	CTG ...	LIA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
1183	51	TTG ...	LPR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Skin_tumor
1082384	42	ATG ...	MPA ...	Ribo-seq	ATG	weak	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
1177070	39	ATG ...	MPT ...	Ribo-seq	ATG	weak	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
1082326	51	ATG ...	MTE ...	Ribo-seq	ATG	weak	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
1081528	72	ATG ...	MAC ...	Ribo-seq	ATG	moderate	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
837	33	CTG ...	LFG ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Skin_tumor
512316	39	CTG ...	LDM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
514340	108	CTG ...	LCR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Spleen_B_cell
1084270	90	TTG ...	LVP ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, v6-5
511972	87	ATG ...	MGF ...	Ribo-seq	ATG	moderate	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
1177173	48	ATG ...	MSF ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
1784367	36	TTG ...	LCP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
1176649	30	TTG ...	LRL ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
1178576	69	ATG ...	MAA ...	Ribo-seq	ATG	strong	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC

149902

ENSMUST00000147797

Nol9-205

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1178513	33	ATG ...	MYC ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
512439	33	CTG ...	LPC ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	MEF
1082326	51	ATG ...	MTE ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	MEF
511420	285	GTG ...	VDL ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Intronic sORF	MEF, Neutrophil
1082740	33	GTG ...	VRV ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	NSC
149901	297	CTG ...	LRL ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Neutrophil
512451	30	CTG ...	LIA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
157621	279	CTG ...	LIR ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Neutrophil
154402	87	CTG ...	LEC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	MEF
1177173	48	ATG ...	MSF ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
154620	51	CTG ...	LSV ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Neutrophil
511767	90	CTG ...	LGG ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Intronic sORF	MEF
512316	39	CTG ...	LDM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
160961	75	CTG ...	LGQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
512136	156	GTG ...	VYY ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Neutrophil, Spleen_B_cell
152712	291	CTG ...	LLV ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Neutrophil
1178576	69	ATG ...	MAA ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
1177214	45	GTG ...	VAL ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
511413	72	TTG ...	LCG ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	Intronic sORF	MEF, Neutrophil
159693	270	GTG ...	VLS ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Neutrophil
1654686	42	TTG ...	LAS ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	MEF
154697	177	CTG ...	LYT ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	MEF, Neutrophil
1081528	72	ATG ...	MAC ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
1176458	60	CTG ...	LSS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
149636	54	CTG ...	LLS ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	MEF, Neutrophil
154598	267	CTG ...	LSP ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Intronic sORF	Brain, MEF, Neutrophil
153158	210	CTG ...	LTS ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	MEF, Neutrophil
1178171	36	GTG ...	VTL ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	MEF
1178569	30	TTG ...	LES ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	MEF
510677	75	CTG ...	LLC ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	MEF, Neutrophil

146124

ENSMUST00000105663

Nol9-203

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
157655	48	CTG ...	LLA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
1885451	93	CTG ...	LLL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
154402	87	CTG ...	LEC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
511413	72	TTG ...	LCG ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	R1E
153158	210	CTG ...	LTS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
154598	267	CTG ...	LSP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
1115	33	GTG ...	VTV ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	MEF
149636	54	CTG ...	LLS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
1080481	87	CTG ...	LCS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
159693	270	GTG ...	VLS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	R1E
1176249	126	CTG ...	LYA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	R1E
1886054	198	GTG ...	VFN ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	R1E
154620	51	CTG ...	LSV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
147811	156	TTG ...	LHA ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
1885799	177	GTG ...	VRY ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	R1E
510677	75	CTG ...	LLC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
160961	75	CTG ...	LGQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
1886104	180	GTG ...	VVR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	R1E
154697	177	CTG ...	LYT ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
152712	291	CTG ...	LLV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
1183	51	TTG ...	LPR ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	MEF
512189	120	TTG ...	LKK ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	R1E
146160	84	GTG ...	VDD ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
511420	285	GTG ...	VDL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	R1E
146123	117	GTG ...	VNA ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
512136	156	GTG ...	VYY ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	R1E
149901	297	CTG ...	LRL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
157621	279	CTG ...	LIR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E

823207

ENSMUST00000103197

Nol9-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1230522	39	ATC ...	IEV ...	Ribo-seq	ATC	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1178110	45	TTG ...	LVP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
511767	90	CTG ...	LGG ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
1230046	63	ATA ...	IQK ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
825751	189	ATG ...	MHR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
514340	108	CTG ...	LCR ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, R1E, v6-5
1177070	39	ATG ...	MPT ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1230617	42	ACG ...	TDA ...	Ribo-seq	ACG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
1228508	78	AAG ...	KAT ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1229255	48	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
1176171	63	GTG ...	VPS ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
823294	171	CTG ...	LQP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
823206	300	CTG ...	LEA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell

ORFs

75 ORFs
5 known transcripts
148 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

511767

CTG...

LGG...

CTG

NMD
sORF
Intronic
InCDS
Overlapping

Spleen_B_cell, v6-5, MEF,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
823207	ENSMUST00000103197	Nol9-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

157655

CTG...

LLA...

CTG

NMD
sORF
Intronic

MEF, Spleen_B_cell, v6-5,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1080481

CTG...

LCS...

CTG

NMD
sORF
Intronic

v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1115

GTG...

VTV...

GTG

Alternative
InCDS
Overlapping
sORF
Intronic
NMD

Skin_tumor, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

1178513

ATG...

MYC...

ATG

Intronic
sORF
NMD
Alternative
InCDS
Overlapping

MEF, E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1177079

TTG...

LKF...

TTG

NMD
sORF

E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

1081071

CTG...

LLC...

CTG

NMD
sORF

MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

512439

CTG...

LPC...

CTG

Intronic
sORF
NMD

MEF, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

1177155

ATG...

MSF...

ATG

Alternative
InCDS
Overlapping
sORF
NMD

Glioma, Liver, MEF,
MESC, E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq	moderate	1	Johnstone2016
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

1082326

ATG...

MTE...

ATG

Intronic
sORF
NMD
Alternative
InCDS
Overlapping

MEF, v6-5, Glioma,
Liver, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq	weak	1	Johnstone2016

1183

TTG...

LPR...

TTG

NMD
sORF
Alternative
InCDS
Overlapping
Intronic

MEF, v6-5, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

157621

279

CTG...

LIR...

CTG

NMD
sORF
Intronic

E14, Liver, Spleen_B_cell,
v6-5, Brain, MEF,
Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1230522

ATC...

IEV...

ATC

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
823207	ENSMUST00000103197	Nol9-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

1885451

CTG...

LLL...

CTG

Intronic
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

511420

285

GTG...

VDL...

GTG

Intronic
sORF
NMD

MEF, Neutrophil, E14,
Liver, Spleen_B_cell, v6-5,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

511972

ATG...

MGF...

ATG

NMD
sORF
Alternative
InCDS
Overlapping

Spleen_B_cell, Glioma, Liver,
MEF, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq	moderate	1	Johnstone2016

1177173

ATG...

MSF...

ATG

NMD
sORF
Intronic
Alternative
InCDS
Overlapping

v6-5, MEF, Glioma,
Liver, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse Johnstone2016

146160

GTG...

VDD...

GTG

NMD
sORF
Intronic

E14, Liver, Spleen_B_cell,
v6-5, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse

154402

CTG...

LEC...

CTG

Intronic
sORF
NMD

Brain, MEF, E14,
Liver, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

1082740

GTG...

VRV...

GTG

Intronic
sORF
NMD

NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

149901

297

CTG...

LRL...

CTG

Intronic
sORF
NMD

Brain, MEF, Neutrophil,
E14, Liver, Spleen_B_cell,
v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

509928

ATG...

MKR...

ATG

NMD
sORF
Alternative
InCDS
Overlapping

E14, Spleen_B_cell, v6-5,
Glioma, Liver, MEF,
MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	weak	3	sORFs_org_Mouse
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq	weak	1	Johnstone2016

512451

CTG...

LIA...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD

MEF, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

511413

TTG...

LCG...

TTG

Intronic
sORF
NMD

R1E, MEF, Neutrophil,
E14, Liver, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

1178110

TTG...

LVP...

TTG

Alternative
InCDS
Overlapping
sORF
NMD

E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
823207	ENSMUST00000103197	Nol9-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

153158

210

CTG...

LTS...

CTG

NMD
sORF
Intronic

E14, Liver, Spleen_B_cell,
v6-5, Brain, R1E,
MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

510677

CTG...

LLC...

CTG

NMD
sORF
Intronic

E14, Liver, Spleen_B_cell,
v6-5, R1E, MEF,
Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

1177214

GTG...

VAL...

GTG

NMD
sORF
Intronic

v6-5, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

160961

CTG...

LGQ...

CTG

NMD
sORF
Intronic

E14, Liver, Spleen_B_cell,
v6-5, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq		1	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

154620

CTG...

LSV...

CTG

Intronic
sORF
NMD

Brain, MEF, Neutrophil,
R1E, E14, Liver,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

1082384

ATG...

MPA...

ATG

Alternative
InCDS
Overlapping
sORF
NMD

Glioma, Liver, MEF,
MESC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq	weak	1	Johnstone2016
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse

154598

267

CTG...

LSP...

CTG

NMD
sORF
Intronic

E14, Liver, Spleen_B_cell,
v6-5, R1E, Brain,
MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse

146123

117

GTG...

VNA...

GTG

NMD
sORF
Intronic

E14, Liver, MEF,
Spleen_B_cell, v6-5, Brain,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		5	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

1177070

ATG...

MPT...

ATG

Alternative
InCDS
Overlapping
sORF
NMD

Glioma, Liver, MEF,
MESC, E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq	weak	1	Johnstone2016
823207	ENSMUST00000103197	Nol9-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

512316

CTG...

LDM...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD

MEF, E14, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

1176458

CTG...

LSS...

CTG

NMD
sORF
Intronic

v6-5, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

149636

CTG...

LLS...

CTG

Intronic
sORF
NMD

Brain, R1E, E14,
Liver, Spleen_B_cell, v6-5,
MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

1176249

126

CTG...

LYA...

CTG

NMD
sORF
Intronic

E14, Liver, MEF,
v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1178236

132

ATG...

MFT...

ATG

NMD
sORF

v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1178569

TTG...

LES...

TTG

NMD
sORF
Intronic

v6-5, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

159693

270

GTG...

VLS...

GTG

Intronic
sORF
NMD

R1E, E14, Liver,
Spleen_B_cell, v6-5, Brain,
MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse

1082619

TTG...

LKV...

TTG

NMD
sORF

MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

1081746

TTG...

LTW...

TTG

NMD
sORF

MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

512136

156

GTG...

VYY...

GTG

Intronic
sORF
NMD

Neutrophil, Spleen_B_cell, E14,
v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

152712

291

CTG...

LLV...

CTG

Intronic
sORF
NMD

Brain, MEF, Neutrophil,
R1E, E14, Liver,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

1886054

198

GTG...

VFN...

GTG

Intronic
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1230046

ATA...

IQK...

ATA

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
823207	ENSMUST00000103197	Nol9-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1178576

ATG...

MAA...

ATG

Intronic
sORF
NMD
Alternative
InCDS
Overlapping

MEF, E14, v6-5,
Glioma, Liver, MESC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq	strong	1	Johnstone2016

147811

156

TTG...

LHA...

TTG

Intronic
sORF
NMD

Brain, R1E, E14,
Liver, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

1178171

GTG...

VTL...

GTG

NMD
sORF
Intronic

E14, v6-5, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

1379443

CTG...

LGP...

CTG

NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

1885799

177

GTG...

VRY...

GTG

Intronic
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

825751

189

ATG...

MHR...

ATG

Alternative
InCDS
Overlapping
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
823207	ENSMUST00000103197	Nol9-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

514340

108

CTG...

LCR...

CTG

Alternative
InCDS
Overlapping
sORF

B_cell, R1E, v6-5,
MEF, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
823207	ENSMUST00000103197	Nol9-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1654686

TTG...

LAS...

TTG

Intronic
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

1177465

CTG...

LGR...

CTG

NMD
sORF

MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

1177558

GTG...

VFR...

GTG

NMD
sORF

v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

154697

177

CTG...

LYT...

CTG

Intronic
sORF
NMD

MEF, Neutrophil, Brain,
R1E, E14, Liver,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

1176171

GTG...

VPS...

GTG

NMD
sORF
Alternative
InCDS
Overlapping

v6-5, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
823207	ENSMUST00000103197	Nol9-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1081528

ATG...

MAC...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD

MEF, Glioma, Liver,
MESC, E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
149902	ENSMUST00000147797	Nol9-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq	moderate	1	Johnstone2016
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

1886104

180

GTG...

VVR...

GTG

Intronic
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

837

CTG...

LFG...

CTG

Alternative
InCDS
Overlapping
sORF

Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1230617

ACG...

TDA...

ACG

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
823207	ENSMUST00000103197	Nol9-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

1177788

CTG...

LTL...

CTG

NMD
sORF

MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

1081755

TTG...

LSE...

TTG

NMD
sORF

E14, Liver, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

512189

120

TTG...

LKK...

TTG

NMD
sORF
Intronic

E14, Liver, Spleen_B_cell,
v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
146124	ENSMUST00000105663	Nol9-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1084270

TTG...

LVP...

TTG

Alternative
InCDS
Overlapping
sORF

E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1228508

AAG...

KAT...

AAG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
823207	ENSMUST00000103197	Nol9-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1229255

GTG...

VLL...

GTG

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
823207	ENSMUST00000103197	Nol9-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1176649

TTG...

LRL...

TTG

NMD
sORF
Alternative
InCDS
Overlapping

MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

823294

171

CTG...

LQP...

CTG

Alternative
InCDS
Overlapping
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
823207	ENSMUST00000103197	Nol9-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1784367

TTG...

LCP...

TTG

InCDS
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
838	ENSMUST00000084116	Nol9-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1081220

135

TTG...

LRL...

TTG

NMD
sORF

E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

1082966

147

CTG...

LPC...

CTG

NMD
sORF

E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
509863	ENSMUST00000131696	Nol9-204	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

823206

300

CTG...

LEA...

CTG

Alternative
InCDS
Overlapping
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
823207	ENSMUST00000103197	Nol9-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

Export data