Gene NCBI:73274 | MetamORF

Gene

ID CARD

NCBI:73274

Aliases

1700034P14Rik
AU019836, D230035M11Rik, ENSMUSG00000032745
Gpbp, Gpbp1, MGI:1920524
mGPBP, NCBI:73274, OFF:Gpbp1

Chromosome

Transcripts

84 ORFs
6 known transcripts
150 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

339907

ENSMUST00000136471

Gpbp1-204

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
26643	168	CTG ...	LTS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative NMD sORF Upstream	Brain
1304771	90	ATA ...	IKL ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative NMD sORF Upstream	E14
1304511	51	AAG ...	KRK ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
941908	87	AAG ...	KLI ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative NMD sORF Upstream	BMDC
1303915	126	TTG ...	LKN ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14, R1E
1303545	33	AAG ...	KMK ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
337228	156	GTG ...	VGD ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	R1E
339632	33	ATG ...	MRE ...	Ribo-seq	ATG	moderate	1	Johnstone2016	Alternative Downstream NMD sORF	Glioma, Liver, MEF, MESC
1301975	42	TTG ...	LIL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
1301849	48	ATG ...	MAL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, R1E
336470	105	CTG ...	LEK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	R1E
342045	63	ATG ...	MTL ...	Ribo-seq	ATG		1	Johnstone2016	Alternative InCDS NMD Overlapping sORF	Glioma, Liver, MEF, MESC
782858	81	CTG ...	LEW ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative NMD sORF Upstream	R1E
28227	207	ATG ...	MSN ...	Ribo-seq	ATG		1	Johnstone2016	Alternative NMD Overlapping sORF Upstream	Glioma, Liver, MEF, MESC
335322	42	CTG ...	LAN ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	NMD sORF Upstream	BMDC, R1E
1850114	144	CTG ...	LRK ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E
336076	144	ATG ...	MVE ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	R1E
335577	141	GTG ...	VEI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	R1E
1850605	153	CTG ...	LTR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E
941498	204	ATG ...	MTL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	BMDC, E14
1850219	180	CTG ...	LVI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E
1849242	114	CTG ...	LIC ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	R1E
336395	42	ATG ...	MDG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	R1E
1304556	99	CTG ...	LEN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative NMD sORF Upstream	E14
27415	150	ATG ...	MSN ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative NMD sORF Upstream	E14, R1E
341577	90	ATG ...	MKM ...	Ribo-seq	ATG		1	Johnstone2016	Downstream NMD sORF	Glioma, Liver, MEF, MESC
781785	60	GTG ...	VTN ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative NMD sORF Upstream	R1E

340610

ENSMUST00000047627

Gpbp1-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
27790	30	CTG ...	LMF ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	NSC
1608554	39	GTG ...	VDK ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Alternative sORF Upstream	MEF
338026	33	TTG ...	LER ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	Overlapping sORF Upstream	B_cell, E14, NSC
782692	69	TTG ...	LAH ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, MEF, v6-5
342045	63	ATG ...	MTL ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, E14, v6-5
332710	36	ATG ...	MKM ...	Ribo-seq	ATG		4	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, MEF, v6-5
28180	93	TTG ...	LCS ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Overlapping sORF Upstream	B_cell, E14, NSC, v6-5
781785	60	GTG ...	VTN ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	sORF Upstream	B_cell, MEF
341018	96	TTG ...	LIL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, v6-5
341840	162	GTG ...	VGD ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell
465034	63	CTG ...	LGG ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, MEF
340230	90	CTG ...	LVL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
340721	150	ATG ...	MVE ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, MEF
783675	57	TTG ...	LAI ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, MEF
341379	102	ATG ...	MAL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, v6-5
335322	42	CTG ...	LAN ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	Alternative sORF Upstream	E14, MEF, v6-5
1490331	51	TTG ...	LRS ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, NSC
27830	36	TTG ...	LCS ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative sORF Upstream	Brain, NSC, v6-5
340274	75	CTG ...	LTM ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, MEF, v6-5
338451	39	ATG ...	MFH ...	Ribo-seq	ATG	moderate	9	sORFs_org_Mouse	sORF Upstream	3T3, B_cell, BMDC, Brain, E14, Liver, MEF, NSC, v6-5
337381	30	ATG ...	MKV ...	Ribo-seq	ATG		4	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, MEF, v6-5
1134890	39	GTG ...	VKF ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	v6-5
341249	147	GTG ...	VEI ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, MEF
464779	69	ATG ...	MKL ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, MEF, v6-5
340989	84	ATG ...	MKV ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
1489901	39	CTG ...	LKI ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, NSC
27415	150	ATG ...	MSN ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Alternative sORF Upstream	E14, Liver, MEF, v6-5
333236	57	GTG ...	VLK ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Overlapping sORF Upstream	B_cell, E14, v6-5
784645	186	TTG ...	LAQ ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF Upstream	B_cell
462559	30	GTG ...	VKM ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
342542	84	CTG ...	LEN ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, E14, Liver, MEF, v6-5
342515	57	TTG ...	LLQ ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, Liver, v6-5
342139	111	CTG ...	LEK ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, MEF
942874	33	ATT ...	ILG ...	Ribo-seq	ATT	moderate	1	sORFs_org_Mouse	sORF Upstream	BMDC
332985	63	TTG ...	LLL ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	v6-5
782858	81	CTG ...	LEW ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	sORF Upstream	B_cell, MEF
332689	54	TTG ...	LKP ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Overlapping sORF Upstream	B_cell, E14, v6-5
1137135	48	TTG ...	LTS ...	Ribo-seq	TTG	weak	2	sORFs_org_Mouse	sORF Upstream	Brain, v6-5
670270	30	TTG ...	LGQ ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	sORF Upstream	MEF
28227	207	ATG ...	MSN ...	Ribo-seq	ATG		5	sORFs_org_Mouse	Overlapping sORF Upstream	B_cell, E14, MEF, NSC, v6-5
942322	90	AAG ...	KNT ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	sORF Upstream	BMDC
26643	168	CTG ...	LTS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative sORF Upstream	v6-5
28210	225	CTG ...	LTS ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Overlapping sORF Upstream	Brain, E14, MEF, v6-5
341476	90	ATG ...	MKT ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, MEF, v6-5
944124	72	AAG ...	KLI ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative sORF Upstream	BMDC
341908	84	TTG ...	LDV ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, v6-5
341577	90	ATG ...	MKM ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, MEF
337750	54	TTG ...	LKE ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	Alternative sORF Upstream	Brain, E14, MEF, NSC, v6-5
27371	63	ATG ...	MKT ...	Ribo-seq	ATG	weak	6	sORFs_org_Mouse	Alternative sORF Upstream	BMDC, Brain, E14, MEF, NSC, v6-5
784364	132	GTG ...	VGE ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF Upstream	B_cell

26644

ENSMUST00000091236

Gpbp1-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
340230	90	CTG ...	LVL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain
28227	207	ATG ...	MSN ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Overlapping sORF Upstream	Brain, R1E, Testis
784315	144	CTG ...	LRL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF Upstream	B_cell
341577	90	ATG ...	MKM ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
336395	42	ATG ...	MDG ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
338026	33	TTG ...	LER ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	Overlapping sORF Upstream	Brain, Spleen_B_cell
27371	63	ATG ...	MKT ...	Ribo-seq	ATG	weak	3	sORFs_org_Mouse	Alternative sORF Upstream	Brain, E14, Testis
784722	138	CTG ...	LVV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF Upstream	B_cell
341249	147	GTG ...	VEI ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, R1E
332689	54	TTG ...	LKP ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Overlapping sORF Upstream	Brain, Spleen_B_cell
332710	36	ATG ...	MKM ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, Spleen_B_cell
341379	102	ATG ...	MAL ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14, R1E
342515	57	TTG ...	LLQ ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, R1E
340989	84	ATG ...	MKV ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
342139	111	CTG ...	LEK ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, R1E
670270	30	TTG ...	LGQ ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	sORF Upstream	3T3, B_cell
26643	168	CTG ...	LTS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
335781	63	ATG ...	MKL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
340721	150	ATG ...	MVE ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, R1E
332985	63	TTG ...	LLL ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	Brain
340274	75	CTG ...	LTM ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Spleen_B_cell
464779	69	ATG ...	MKL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
673183	36	CTG ...	LVG ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF Upstream	3T3, B_cell
338451	39	ATG ...	MFH ...	Ribo-seq	ATG	moderate	5	sORFs_org_Mouse	sORF Upstream	Brain, E14, R1E, Spleen_B_cell
341018	96	TTG ...	LIL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14
333213	60	TTG ...	LGG ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
465034	63	CTG ...	LGG ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell, v6-5
27415	150	ATG ...	MSN ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative sORF Upstream	Brain, Testis
27790	30	CTG ...	LMF ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
337381	30	ATG ...	MKV ...	Ribo-seq	ATG		4	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, MEF, Spleen_B_cell
337750	54	TTG ...	LKE ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	Brain
339632	33	ATG ...	MRE ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
341476	90	ATG ...	MKT ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
942874	33	ATT ...	ILG ...	Ribo-seq	ATT	moderate	1	sORFs_org_Mouse	sORF Upstream	E14
333236	57	GTG ...	VLK ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Overlapping sORF Upstream	Brain, Spleen_B_cell
28180	93	TTG ...	LCS ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Overlapping sORF Upstream	Brain, Spleen_B_cell, Testis
462559	30	GTG ...	VKM ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
1137135	48	TTG ...	LTS ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	sORF Upstream	MEF
1305792	75	ATA ...	IKL ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative sORF Upstream	E14
784624	150	TTG ...	LGL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF Upstream	B_cell
341908	84	TTG ...	LDV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
341001	108	CTG ...	LRV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
28210	225	CTG ...	LTS ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Overlapping sORF Upstream	B_cell, R1E, Testis
336847	39	CTG ...	LNM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
342045	63	ATG ...	MTL ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, E14, R1E
341359	102	GTG ...	VFG ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
335322	42	CTG ...	LAN ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative sORF Upstream	Brain
341840	162	GTG ...	VGD ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, R1E
27830	36	TTG ...	LCS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
342542	84	CTG ...	LEN ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative sORF Upstream	Brain, E14, R1E, Spleen_B_cell

782319

ENSMUST00000143331

Gpbp1-205

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
336470	105	CTG ...	LEK ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	B_cell
334683	57	CTG ...	LGG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	B_cell
336076	144	ATG ...	MVE ...	Ribo-seq	ATG		1	sORFs_org_Mouse	ncRNA sORF	B_cell
334883	84	ATG ...	MKT ...	Ribo-seq	ATG		1	sORFs_org_Mouse	ncRNA sORF	B_cell
337228	156	GTG ...	VGD ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	B_cell
335781	63	ATG ...	MKL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	ncRNA sORF	B_cell
339682	69	CTG ...	LTM ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	B_cell
335577	141	GTG ...	VEI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	B_cell

334684

ENSMUST00000129638

Gpbp1-203

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
336470	105	CTG ...	LEK ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	Brain, MEF
334883	84	ATG ...	MKT ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, v6-5
334683	57	CTG ...	LGG ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, v6-5
333213	60	TTG ...	LGG ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	v6-5
337228	156	GTG ...	VGD ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain
339682	69	CTG ...	LTM ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, MEF, v6-5
335781	63	ATG ...	MKL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	MEF, v6-5
335577	141	GTG ...	VEI ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Brain, MEF
336076	144	ATG ...	MVE ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	Brain, MEF

462402

ENSMUST00000156221

Gpbp1-206

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
335781	63	ATG ...	MKL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell
941924	126	ATT ...	IFH ...	Ribo-seq	ATT		1	sORFs_org_Mouse	ncRNA sORF	BMDC
336395	42	ATG ...	MDG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell
334683	57	CTG ...	LGG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell
339682	69	CTG ...	LTM ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Spleen_B_cell
942350	204	ACG ...	THG ...	Ribo-seq	ACG		1	sORFs_org_Mouse	ncRNA sORF	BMDC

3235795

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
341577	90	ATG ...	MKM ...	Predicted	ATG		1	Samandi2017	sORF
28227	207	ATG ...	MSN ...	Predicted	ATG		1	Samandi2017	sORF
340721	150	ATG ...	MVE ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

84 ORFs
6 known transcripts
150 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

26643

168

CTG...

LTS...

CTG

Alternative
NMD
sORF
Upstream

Brain, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

27790

CTG...

LMF...

CTG

Alternative
sORF
Upstream

NSC, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

340230

CTG...

LVL...

CTG

Alternative
InCDS
Overlapping
sORF

B_cell, Brain, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1608554

GTG...

VDK...

GTG

Alternative
sORF
Upstream

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

28227

207

ATG...

MSN...

ATG

Overlapping
sORF
Upstream
Alternative
NMD

Brain, R1E, Testis,
Glioma, Liver, MEF,
MESC, B_cell,
E14, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	Johnstone2016
3235795	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse

336470

105

CTG...

LEK...

CTG

ncRNA
sORF
Intronic
Alternative
InCDS
NMD
Overlapping

B_cell, Brain, MEF,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
782319	ENSMUST00000143331	Gpbp1-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
334684	ENSMUST00000129638	Gpbp1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

784315

144

CTG...

LRL...

CTG

sORF
Upstream

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

334683

CTG...

LGG...

CTG

ncRNA
sORF
Intronic

B_cell, Brain, MEF,
v6-5, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
782319	ENSMUST00000143331	Gpbp1-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
334684	ENSMUST00000129638	Gpbp1-203	retained_intron	Ribo-seq		3	sORFs_org_Mouse
462402	ENSMUST00000156221	Gpbp1-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

338026

TTG...

LER...

TTG

Overlapping
sORF
Upstream

B_cell, E14, NSC,
Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

782692

TTG...

LAH...

TTG

Alternative
sORF
Upstream

B_cell, MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

341577

ATG...

MKM...

ATG

Alternative
InCDS
Overlapping
sORF
Downstream
NMD

3T3, Brain,
Glioma, Liver, MEF,
MESC, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
3235795	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	Johnstone2016
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

342045

ATG...

MTL...

ATG

InCDS
Overlapping
sORF
Alternative
NMD

BMDC, E14, v6-5,
Glioma, Liver, MEF,
MESC, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	Johnstone2016
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

332710

ATG...

MKM...

ATG

InCDS
Overlapping
sORF

B_cell, MEF, v6-5,
3T3, Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1304771

ATA...

IKL...

ATA

Alternative
NMD
sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

28180

TTG...

LCS...

TTG

Overlapping
sORF
Upstream

B_cell, E14, NSC,
v6-5, Brain, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

781785

GTG...

VTN...

GTG

sORF
Upstream
Alternative
NMD

B_cell, MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

336395

ATG...

MDG...

ATG

Alternative
InCDS
Overlapping
sORF
ncRNA
NMD

Brain, Spleen_B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
462402	ENSMUST00000156221	Gpbp1-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

341018

TTG...

LIL...

TTG

Alternative
InCDS
Overlapping
sORF

B_cell, v6-5, Brain,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

341840

162

GTG...

VGD...

GTG

InCDS
Overlapping
sORF

B_cell, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

334883

ATG...

MKT...

ATG

Intronic
sORF
ncRNA

Brain, MEF, v6-5,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
334684	ENSMUST00000129638	Gpbp1-203	retained_intron	Ribo-seq		3	sORFs_org_Mouse
782319	ENSMUST00000143331	Gpbp1-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

1304511

AAG...

KRK...

AAG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

27371

ATG...

MKT...

ATG

Alternative
sORF
Upstream

Brain, E14, Testis,
BMDC, MEF, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	weak	6	sORFs_org_Mouse

784722

138

CTG...

LVV...

CTG

sORF
Upstream

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

941908

AAG...

KLI...

AAG

Alternative
NMD
sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

341249

147

GTG...

VEI...

GTG

InCDS
Overlapping
sORF

3T3, Brain, R1E,
B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

332689

TTG...

LKP...

TTG

Overlapping
sORF
Upstream

Brain, Spleen_B_cell, B_cell,
E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

1303915

126

TTG...

LKN...

TTG

Alternative
Downstream
NMD
sORF

E14, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

465034

CTG...

LGG...

CTG

InCDS
Overlapping
sORF

B_cell, MEF, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

341379

102

ATG...

MAL...

ATG

Alternative
InCDS
Overlapping
sORF

Brain, E14, R1E,
B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

342515

TTG...

LLQ...

TTG

InCDS
Overlapping
sORF

Brain, R1E, E14,
Liver, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

336076

144

ATG...

MVE...

ATG

ncRNA
sORF
Alternative
InCDS
NMD
Overlapping
Intronic

B_cell, R1E, Brain,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
782319	ENSMUST00000143331	Gpbp1-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
334684	ENSMUST00000129638	Gpbp1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1303545

AAG...

KMK...

AAG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

340989

ATG...

MKV...

ATG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

340721

150

ATG...

MVE...

ATG

InCDS
Overlapping
sORF

B_cell, MEF, Brain,
R1E,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
3235795	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

783675

TTG...

LAI...

TTG

Alternative
sORF
Upstream

B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse

337228

156

GTG...

VGD...

GTG

Alternative
InCDS
NMD
Overlapping
sORF
ncRNA
Intronic

R1E, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
782319	ENSMUST00000143331	Gpbp1-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
334684	ENSMUST00000129638	Gpbp1-203	retained_intron	Ribo-seq		1	sORFs_org_Mouse

342139

111

CTG...

LEK...

CTG

InCDS
Overlapping
sORF

Brain, R1E, B_cell,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

335781

ATG...

MKL...

ATG

ncRNA
sORF
Alternative
InCDS
Overlapping
Intronic

Spleen_B_cell, Brain, B_cell,
MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
462402	ENSMUST00000156221	Gpbp1-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
782319	ENSMUST00000143331	Gpbp1-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
334684	ENSMUST00000129638	Gpbp1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse

670270

TTG...

LGQ...

TTG

sORF
Upstream

3T3, B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse

339632

ATG...

MRE...

ATG

Alternative
Downstream
NMD
sORF
InCDS
Overlapping

Glioma, Liver, MEF,
MESC, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq	moderate	1	Johnstone2016
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

335322

CTG...

LAN...

CTG

Alternative
sORF
Upstream
NMD

E14, MEF, v6-5,
BMDC, R1E, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

941924

126

ATT...

IFH...

ATT

ncRNA
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
462402	ENSMUST00000156221	Gpbp1-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

332985

TTG...

LLL...

TTG

Alternative
sORF
Upstream

Brain, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

340274

CTG...

LTM...

CTG

InCDS
Overlapping
sORF

Brain, Spleen_B_cell, B_cell,
MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

464779

ATG...

MKL...

ATG

InCDS
Overlapping
sORF

Spleen_B_cell, B_cell, MEF,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

673183

CTG...

LVG...

CTG

sORF
Upstream

3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

338451

ATG...

MFH...

ATG

sORF
Upstream

Brain, E14, R1E,
Spleen_B_cell, 3T3, B_cell,
BMDC, Liver, MEF,
NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	moderate	9	sORFs_org_Mouse

1301975

TTG...

LIL...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1490331

TTG...

LRS...

TTG

InCDS
Overlapping
sORF

MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

333213

TTG...

LGG...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic

Brain, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
334684	ENSMUST00000129638	Gpbp1-203	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

1301849

ATG...

MAL...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

E14, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

27830

TTG...

LCS...

TTG

Alternative
sORF
Upstream

Brain, NSC, v6-5,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

27415

150

ATG...

MSN...

ATG

Alternative
sORF
Upstream
NMD

Brain, Testis, E14,
Liver, MEF, v6-5,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

339682

CTG...

LTM...

CTG

ncRNA
sORF
Intronic

B_cell, Brain, MEF,
v6-5, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
782319	ENSMUST00000143331	Gpbp1-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
334684	ENSMUST00000129638	Gpbp1-203	retained_intron	Ribo-seq		3	sORFs_org_Mouse
462402	ENSMUST00000156221	Gpbp1-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

337381

ATG...

MKV...

ATG

InCDS
Overlapping
sORF

B_cell, MEF, v6-5,
3T3, Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		4	sORFs_org_Mouse

1134890

GTG...

VKF...

GTG

Alternative
sORF
Upstream

v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1489901

CTG...

LKI...

CTG

InCDS
Overlapping
sORF

MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

337750

TTG...

LKE...

TTG

Alternative
sORF
Upstream

Brain, E14, MEF,
NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse

782858

CTG...

LEW...

CTG

Alternative
NMD
sORF
Upstream

R1E, B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

341476

ATG...

MKT...

ATG

InCDS
Overlapping
sORF

Brain, B_cell, MEF,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

942874

ATT...

ILG...

ATT

sORF
Upstream

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

335577

141

GTG...

VEI...

GTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping
ncRNA

Brain, MEF, R1E,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
334684	ENSMUST00000129638	Gpbp1-203	retained_intron	Ribo-seq		2	sORFs_org_Mouse
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
782319	ENSMUST00000143331	Gpbp1-205	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

333236

GTG...

VLK...

GTG

Overlapping
sORF
Upstream

Brain, Spleen_B_cell, B_cell,
E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

1850114

144

CTG...

LRK...

CTG

Alternative
Downstream
NMD
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

462559

GTG...

VKM...

GTG

Alternative
InCDS
Overlapping
sORF

Spleen_B_cell, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1137135

TTG...

LTS...

TTG

sORF
Upstream

MEF, Brain, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse

1305792

ATA...

IKL...

ATA

Alternative
sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

784624

150

TTG...

LGL...

TTG

sORF
Upstream

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

784645

186

TTG...

LAQ...

TTG

sORF
Upstream

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

341908

TTG...

LDV...

TTG

Alternative
InCDS
Overlapping
sORF

Brain, B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

341001

108

CTG...

LRV...

CTG

Alternative
InCDS
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1850605

153

CTG...

LTR...

CTG

Alternative
Downstream
NMD
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

342542

CTG...

LEN...

CTG

Alternative
sORF
Upstream

B_cell, E14, Liver,
MEF, v6-5, Brain,
R1E, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		4	sORFs_org_Mouse

28210

225

CTG...

LTS...

CTG

Overlapping
sORF
Upstream

B_cell, R1E, Testis,
Brain, E14, MEF,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

336847

CTG...

LNM...

CTG

InCDS
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

341359

102

GTG...

VFG...

GTG

Alternative
InCDS
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
26644	ENSMUST00000091236	Gpbp1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

942350

204

ACG...

THG...

ACG

ncRNA
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
462402	ENSMUST00000156221	Gpbp1-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

941498

204

ATG...

MTL...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

1850219

180

CTG...

LVI...

CTG

Alternative
Downstream
NMD
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1849242

114

CTG...

LIC...

CTG

Alternative
Downstream
NMD
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

942322

AAG...

KNT...

AAG

sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1304556

CTG...

LEN...

CTG

Alternative
NMD
sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
339907	ENSMUST00000136471	Gpbp1-204	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

944124

AAG...

KLI...

AAG

Alternative
sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

784364

132

GTG...

VGE...

GTG

sORF
Upstream

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
340610	ENSMUST00000047627	Gpbp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

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