Gene NCBI:68920 | MetamORF

Gene

ID CARD

NCBI:68920

Aliases

1110065P20Rik
C530005M16Rik, ENSMUSG00000078570, MGI:1916170
NCBI:68920, OFF:1110065P20Rik

Chromosome

Transcripts

20 ORFs
6 known transcripts
58 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

1232722

ENSMUST00000163946

1110065P20Rik-204

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
59729	213	GTG ...	VRR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative NewCDS sORF	E14, R1E
60091	285	ATG ...	MNA ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative NewCDS sORF	E14, R1E
56080	81	ATG ...	MEP ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	E14, R1E
57235	105	GTG ...	VAF ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	R1E
59787	165	GTG ...	VAG ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	E14, R1E
58624	90	ATG ...	MLA ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	R1E
57530	87	CTG ...	LAM ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	E14, R1E
57203	120	CTG ...	LYR ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	E14, R1E
56111	141	CTG ...	LER ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	E14, R1E
60233	168	CTG ...	LVA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	E14, R1E

545401

ENSMUST00000106190

1110065P20Rik-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
60233	168	CTG ...	LVA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3
59787	165	GTG ...	VAG ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3
56080	81	ATG ...	MEP ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3
57203	120	CTG ...	LYR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3
162524	285	ATG ...	MNA ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3, BMDC
58624	90	ATG ...	MLA ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3
57530	87	CTG ...	LAM ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3
165227	213	GTG ...	VRR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3
56111	141	CTG ...	LER ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3
57235	105	GTG ...	VAF ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	3T3

56081

ENSMUST00000137769

1110065P20Rik-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
57530	87	CTG ...	LAM ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Testis
57203	120	CTG ...	LYR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Testis
60091	285	ATG ...	MNA ...	Ribo-seq	ATG		3	sORFs_org_Mouse Johnstone2016	Alternative NewCDS sORF	C2C12, Glioma, Liver, MEF, MESC, Testis
162524	285	ATG ...	MNA ...	Ribo-seq	ATG		1	Johnstone2016	Alternative NewCDS sORF	Glioma, Liver, MEF, MESC
59787	165	GTG ...	VAG ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Brain, Testis
58624	90	ATG ...	MLA ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Testis
154078	96	ATG ...	MAT ...	Ribo-seq	ATG	strong	1	Johnstone2016	Alternative Downstream sORF	Glioma, Liver, MEF, MESC
56080	81	ATG ...	MEP ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Testis
60233	168	CTG ...	LVA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Brain, Testis
59729	213	GTG ...	VRR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative NewCDS sORF	Testis
57235	105	GTG ...	VAF ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Testis
56111	141	CTG ...	LER ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Testis

547887

ENSMUST00000185036

1110065P20Rik-206

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
57235	105	GTG ...	VAF ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Brain
165227	213	GTG ...	VRR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Brain
547886	60	TTG ...	LRR ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Alternative sORF Upstream	3T3
162524	285	ATG ...	MNA ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Brain
56080	81	ATG ...	MEP ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Brain
57203	120	CTG ...	LYR ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Brain
58624	90	ATG ...	MLA ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Brain
57530	87	CTG ...	LAM ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	Brain

1016577

ENSMUST00000184704

1110065P20Rik-205

retained_intron

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

56111

141

CTG ...

LER ...

Ribo-seq

CTG

strong

sORFs_org_Mouse

Brain

147180

ENSMUST00000125776

1110065P20Rik-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
57235	105	GTG ...	VAF ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	sORF	Brain, Liver
57203	120	CTG ...	LYR ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	sORF	Brain, Liver
148897	204	CTG ...	LTS ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF	Brain
154078	96	ATG ...	MAT ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	sORF	Brain
162524	285	ATG ...	MNA ...	Ribo-seq	ATG		2	sORFs_org_Mouse	sORF	Brain, Liver
165227	213	GTG ...	VRR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF	Brain, Liver
59787	165	GTG ...	VAG ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF	Brain, Liver
151758	120	CTG ...	LVL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF	Brain
159111	51	CTG ...	LKA ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	sORF	Brain
56111	141	CTG ...	LER ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	sORF	Brain, Liver
60233	168	CTG ...	LVA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF	Brain, Liver
157985	123	TTG ...	LLV ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	sORF	Brain
56080	81	ATG ...	MEP ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse	sORF	Brain, Liver
156655	174	CTG ...	LDC ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF	Brain
155306	39	CTG ...	LCF ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	sORF	Brain
58624	90	ATG ...	MLA ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	sORF	Brain, Liver
57530	87	CTG ...	LAM ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	sORF	Brain, Liver

3025115

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
162524	285	ATG ...	MNA ...	Predicted	ATG		1	Samandi2017	sORF
60091	285	ATG ...	MNA ...	Predicted	ATG		1	Samandi2017	sORF
154078	96	ATG ...	MAT ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

20 ORFs
6 known transcripts
58 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

59729

213

GTG...

VRR...

GTG

Alternative
NewCDS
sORF

E14, R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1232722	ENSMUST00000163946	1110065P20Rik-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse
56081	ENSMUST00000137769	1110065P20Rik-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

60233

168

CTG...

LVA...

CTG

Alternative
Downstream
Overlapping
sORF

3T3, Brain, Testis,
Liver, E14, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
545401	ENSMUST00000106190	1110065P20Rik-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
56081	ENSMUST00000137769	1110065P20Rik-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
1232722	ENSMUST00000163946	1110065P20Rik-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse

59787

165

GTG...

VAG...

GTG

Alternative
Downstream
Overlapping
sORF

3T3, E14, R1E,
Brain, Testis, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
545401	ENSMUST00000106190	1110065P20Rik-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1232722	ENSMUST00000163946	1110065P20Rik-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse
56081	ENSMUST00000137769	1110065P20Rik-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

60091

285

ATG...

MNA...

ATG

Alternative
NewCDS
sORF

E14, R1E, C2C12,
Glioma, Liver, MEF,
MESC, Testis,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1232722	ENSMUST00000163946	1110065P20Rik-204	protein_coding	Ribo-seq		3	sORFs_org_Mouse
56081	ENSMUST00000137769	1110065P20Rik-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse Johnstone2016
3025115	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

57530

CTG...

LAM...

CTG

Alternative
Downstream
Overlapping
sORF

Testis, E14, R1E,
3T3, Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
56081	ENSMUST00000137769	1110065P20Rik-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
1232722	ENSMUST00000163946	1110065P20Rik-204	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
545401	ENSMUST00000106190	1110065P20Rik-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
547887	ENSMUST00000185036	1110065P20Rik-206	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

57235

105

GTG...

VAF...

GTG

Alternative
Downstream
Overlapping
sORF

Brain, R1E, Liver,
3T3, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
547887	ENSMUST00000185036	1110065P20Rik-206	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
1232722	ENSMUST00000163946	1110065P20Rik-204	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
545401	ENSMUST00000106190	1110065P20Rik-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
56081	ENSMUST00000137769	1110065P20Rik-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

56080

ATG...

MEP...

ATG

Alternative
Downstream
Overlapping
sORF

E14, R1E, 3T3,
Testis, Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1232722	ENSMUST00000163946	1110065P20Rik-204	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
545401	ENSMUST00000106190	1110065P20Rik-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
56081	ENSMUST00000137769	1110065P20Rik-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
547887	ENSMUST00000185036	1110065P20Rik-206	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

57203

120

CTG...

LYR...

CTG

Alternative
Downstream
Overlapping
sORF

Testis, Brain, Liver,
3T3, E14, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
56081	ENSMUST00000137769	1110065P20Rik-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
545401	ENSMUST00000106190	1110065P20Rik-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
1232722	ENSMUST00000163946	1110065P20Rik-204	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
547887	ENSMUST00000185036	1110065P20Rik-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

165227

213

GTG...

VRR...

GTG

Alternative
Downstream
Overlapping
sORF

Brain, Liver, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
547887	ENSMUST00000185036	1110065P20Rik-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
545401	ENSMUST00000106190	1110065P20Rik-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

56111

141

CTG...

LER...

CTG

Intronic
sORF
Alternative
Downstream
Overlapping

Brain, Liver, 3T3,
E14, R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1016577	ENSMUST00000184704	1110065P20Rik-205	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
545401	ENSMUST00000106190	1110065P20Rik-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
1232722	ENSMUST00000163946	1110065P20Rik-204	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
56081	ENSMUST00000137769	1110065P20Rik-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

547886

TTG...

LRR...

TTG

Alternative
sORF
Upstream

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
547887	ENSMUST00000185036	1110065P20Rik-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

162524

285

ATG...

MNA...

ATG

Alternative
NewCDS
sORF
Downstream
Overlapping

Glioma, Liver, MEF,
MESC, Brain,
3T3, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
56081	ENSMUST00000137769	1110065P20Rik-203	protein_coding	Ribo-seq		1	Johnstone2016
3025115	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
545401	ENSMUST00000106190	1110065P20Rik-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
547887	ENSMUST00000185036	1110065P20Rik-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

148897

204

CTG...

LTS...

CTG

sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

154078

ATG...

MAT...

ATG

sORF
Alternative
Downstream

Brain, Glioma, Liver,
MEF, MESC,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
56081	ENSMUST00000137769	1110065P20Rik-203	protein_coding	Ribo-seq	strong	1	Johnstone2016
3025115	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

58624

ATG...

MLA...

ATG

Alternative
Downstream
Overlapping
sORF

Testis, R1E, 3T3,
Brain, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
56081	ENSMUST00000137769	1110065P20Rik-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
1232722	ENSMUST00000163946	1110065P20Rik-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
545401	ENSMUST00000106190	1110065P20Rik-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
547887	ENSMUST00000185036	1110065P20Rik-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

151758

120

CTG...

LVL...

CTG

sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

159111

CTG...

LKA...

CTG

sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

157985

123

TTG...

LLV...

TTG

sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

156655

174

CTG...

LDC...

CTG

sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

155306

CTG...

LCF...

CTG

sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
147180	ENSMUST00000125776	1110065P20Rik-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

Export data