Gene NCBI:68342 | MetamORF

Gene

ID CARD

NCBI:68342

Aliases

0610011B04Rik
22kDa, ENSMUSG00000040048, MGI:1915592
NCBI:68342, Ndufb10, OFF:Ndufb10
PDSW

Chromosome

Transcripts

42 ORFs
6 known transcripts
96 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

704641

ENSMUST00000135708

Ndufb10-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
484201	48	CTG ...	LRC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	v6-5
956353	93	ATT ...	ILG ...	Ribo-seq	ATT	weak	1	sORFs_org_Mouse	sORF	BMDC
483684	69	ATG ...	MFC ...	Ribo-seq	ATG		2	sORFs_org_Mouse	sORF	MEF, v6-5
483931	72	GTG ...	VMF ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	v6-5
707417	72	TTG ...	LGQ ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	sORF	BMDC
390670	144	ATG ...	MPR ...	Ribo-seq	ATG		5	sORFs_org_Mouse	sORF	BMDC, Brain, E14, R1E, v6-5
483110	54	ATG ...	MRL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	sORF	MEF, v6-5
704640	105	GTG ...	VGR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	sORF	3T3
1048677	234	TTG ...	LGL ...	Ribo-seq	TTG		3	sORFs_org_Mouse	sORF	Brain, Neutrophil, R1E
389075	156	TTG ...	LND ...	Ribo-seq	TTG		3	sORFs_org_Mouse	sORF	Brain, R1E, v6-5
387928	36	CTG ...	LAR ...	Ribo-seq	CTG		4	sORFs_org_Mouse	sORF	E14, Liver, MEF
380273	129	ATG ...	MPR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	BMDC
954325	84	ACG ...	TTA ...	Ribo-seq	ACG	weak	1	sORFs_org_Mouse	sORF	BMDC

383390

ENSMUST00000045602

Ndufb10-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
381456	141	TTG ...	LND ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Spleen_B_cell
480585	75	TTG ...	LSA ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
389733	207	CTG ...	LLQ ...	Ribo-seq	CTG		6	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, BMDC, Brain, E14, Liver, Spleen_B_cell
387928	36	CTG ...	LAR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
483931	72	GTG ...	VMF ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Liver, Spleen_B_cell
385601	48	CTG ...	LLP ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, E14
390670	144	ATG ...	MPR ...	Ribo-seq	ATG		7	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	3T3, BMDC, Brain, E14, Glioma, Liver, MEF, MESC, Spleen_B_cell
483110	54	ATG ...	MRL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Spleen_B_cell
481753	39	CTG ...	LCQ ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
380273	129	ATG ...	MPR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Spleen_B_cell
383515	54	ATG ...	MFC ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
484201	48	CTG ...	LRC ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Spleen_B_cell
389075	156	TTG ...	LND ...	Ribo-seq	TTG		6	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, BMDC, Brain, E14, Liver, Spleen_B_cell
383389	111	TTG ...	LLK ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Overlapping sORF Upstream	3T3, Brain
390029	234	TTG ...	LGL ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Liver, Spleen_B_cell
389475	198	CTG ...	LTG ...	Ribo-seq	CTG		6	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, BMDC, Brain, E14, Liver, Spleen_B_cell
388288	78	ATG ...	MCT ...	Ribo-seq	ATG	moderate	3	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	3T3, Brain, Glioma, Liver, MEF, MESC
483684	69	ATG ...	MFC ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Liver, Spleen_B_cell
707417	72	TTG ...	LGQ ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
387993	57	GTG ...	VMF ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell

36287

ENSMUST00000129451

Ndufb10-202

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
707417	72	TTG ...	LGQ ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	R1E
37954	102	TTG ...	LDL ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	Intronic sORF	BMDC, R1E, Testis
36286	42	CTG ...	LEE ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Intronic sORF	R1E, Testis
388768	192	CTG ...	LLQ ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, Neutrophil, R1E
387928	36	CTG ...	LAR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	R1E
383389	111	TTG ...	LLK ...	Ribo-seq	TTG	moderate	2	sORFs_org_Mouse	Intronic sORF	BMDC, R1E
380273	129	ATG ...	MPR ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, Neutrophil, R1E
38185	66	CTG ...	LAK ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	BMDC, R1E, Testis
1005126	45	GTG ...	VTL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain
385601	48	CTG ...	LLP ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, R1E
36508	81	TTG ...	LTK ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Intronic sORF	Brain, R1E
37681	129	GTG ...	VPD ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	Neutrophil, Testis
37661	153	GTG ...	VYP ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Intronic sORF	Brain, R1E, Testis
709295	33	GTG ...	VPR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Neutrophil
980587	84	CTG ...	LPE ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	BMDC
383515	54	ATG ...	MFC ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	R1E
37026	96	CTG ...	LGA ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	Intronic sORF	BMDC, R1E, Testis
387993	57	GTG ...	VMF ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	BMDC, R1E
704640	105	GTG ...	VGR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	R1E
1048020	39	GTG ...	VER ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Intronic sORF	BMDC, Neutrophil
388288	78	ATG ...	MCT ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	R1E
381456	141	TTG ...	LND ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, Neutrophil, R1E
384167	183	CTG ...	LTG ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, Neutrophil, R1E
1541426	219	TTG ...	LGL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	Brain, R1E
37089	57	GTG ...	VDW ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain

379806

ENSMUST00000144285

Ndufb10-205

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
380273	129	ATG ...	MPR ...	Ribo-seq	ATG		9	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, E14, Liver, MEF, NSC, v6-5
37026	96	CTG ...	LGA ...	Ribo-seq	CTG	strong	6	sORFs_org_Mouse	Intronic sORF	Brain, E14, Liver, MEF
384167	183	CTG ...	LTG ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Liver
381456	141	TTG ...	LND ...	Ribo-seq	TTG		10	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, E14, Liver, MEF, NSC, v6-5
37954	102	TTG ...	LDL ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	Intronic sORF	Brain, E14, Liver, MEF
481753	39	CTG ...	LCQ ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	E14, Liver, NSC
383515	54	ATG ...	MFC ...	Ribo-seq	ATG		5	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Liver, MEF, v6-5
480585	75	TTG ...	LSA ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Intronic sORF	E14, MEF, v6-5
38185	66	CTG ...	LAK ...	Ribo-seq	CTG	moderate	6	sORFs_org_Mouse	Intronic sORF	Brain, E14, Liver, MEF, v6-5
36286	42	CTG ...	LEE ...	Ribo-seq	CTG	strong	4	sORFs_org_Mouse	Intronic sORF	Brain, E14, Liver, MEF
388768	192	CTG ...	LLQ ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Liver
709295	33	GTG ...	VPR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	NSC
980587	84	CTG ...	LPE ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	NSC
387993	57	GTG ...	VMF ...	Ribo-seq	GTG		5	sORFs_org_Mouse	Intronic sORF	B_cell, Brain, Liver, MEF, v6-5
37681	129	GTG ...	VPD ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
1152624	39	ATG ...	MRL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Intronic sORF	MEF, v6-5

36509

ENSMUST00000147648

Ndufb10-206

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
385601	48	CTG ...	LLP ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	ncRNA sORF	Liver
37661	153	GTG ...	VYP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	Liver
1194381	78	ACG ...	TKA ...	Ribo-seq	ACG		1	sORFs_org_Mouse	ncRNA sORF	E14
383389	111	TTG ...	LLK ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Liver
956353	93	ATT ...	ILG ...	Ribo-seq	ATT	weak	1	sORFs_org_Mouse	ncRNA sORF	E14
707417	72	TTG ...	LGQ ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Liver
1193196	159	AAG ...	KDV ...	Ribo-seq	AAG		1	sORFs_org_Mouse	ncRNA sORF	E14
380273	129	ATG ...	MPR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	ncRNA sORF	E14
704640	105	GTG ...	VGR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	ncRNA sORF	Liver
37089	57	GTG ...	VDW ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	Testis
1048020	39	GTG ...	VER ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	ncRNA sORF	E14
36508	81	TTG ...	LTK ...	Ribo-seq	TTG		2	sORFs_org_Mouse	ncRNA sORF	Brain, Testis
387928	36	CTG ...	LAR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	Brain
388288	78	ATG ...	MCT ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	ncRNA sORF	E14, Liver

702481

ENSMUST00000141324

Ndufb10-204

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
980587	84	CTG ...	LPE ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Liver
36286	42	CTG ...	LEE ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	3T3
709295	33	GTG ...	VPR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
481753	39	CTG ...	LCQ ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Liver
38185	66	CTG ...	LAK ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, MEF
37026	96	CTG ...	LGA ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Intronic sORF	3T3
480585	75	TTG ...	LSA ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	Intronic sORF	3T3, Liver, MEF
37954	102	TTG ...	LDL ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3

3380784

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
390670	144	ATG ...	MPR ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

42 ORFs
6 known transcripts
96 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

484201

CTG...

LRC...

CTG

sORF
InCDS
Overlapping

v6-5, 3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
704641	ENSMUST00000135708	Ndufb10-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

381456

141

TTG...

LND...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic

3T3, Spleen_B_cell, B_cell,
Brain, E14, Liver,
MEF, NSC, v6-5,
BMDC, Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
379806	ENSMUST00000144285	Ndufb10-205	retained_intron	Ribo-seq		10	sORFs_org_Mouse
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq		4	sORFs_org_Mouse

707417

TTG...

LGQ...

TTG

Intronic
sORF
ncRNA
Alternative
InCDS
Overlapping

R1E, Liver, BMDC,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
36509	ENSMUST00000147648	Ndufb10-206	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
704641	ENSMUST00000135708	Ndufb10-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

37954

102

TTG...

LDL...

TTG

Intronic
sORF

BMDC, R1E, Testis,
Brain, E14, Liver,
MEF, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse
379806	ENSMUST00000144285	Ndufb10-205	retained_intron	Ribo-seq	moderate	5	sORFs_org_Mouse
702481	ENSMUST00000141324	Ndufb10-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

380273

129

ATG...

MPR...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping
ncRNA

B_cell, Brain, E14,
Liver, MEF, NSC,
v6-5, BMDC, Neutrophil,
R1E, 3T3, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379806	ENSMUST00000144285	Ndufb10-205	retained_intron	Ribo-seq		9	sORFs_org_Mouse
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq		4	sORFs_org_Mouse
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
36509	ENSMUST00000147648	Ndufb10-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
704641	ENSMUST00000135708	Ndufb10-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

37026

CTG...

LGA...

CTG

Intronic
sORF

Brain, E14, Liver,
MEF, BMDC, R1E,
Testis, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379806	ENSMUST00000144285	Ndufb10-205	retained_intron	Ribo-seq	strong	6	sORFs_org_Mouse
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse
702481	ENSMUST00000141324	Ndufb10-204	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

480585

TTG...

LSA...

TTG

Alternative
InCDS
Overlapping
sORF
Intronic

Spleen_B_cell, E14, MEF,
v6-5, 3T3, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
379806	ENSMUST00000144285	Ndufb10-205	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
702481	ENSMUST00000141324	Ndufb10-204	retained_intron	Ribo-seq	moderate	4	sORFs_org_Mouse

36286

CTG...

LEE...

CTG

Intronic
sORF

R1E, Testis, 3T3,
Brain, E14, Liver,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
702481	ENSMUST00000141324	Ndufb10-204	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
379806	ENSMUST00000144285	Ndufb10-205	retained_intron	Ribo-seq	strong	4	sORFs_org_Mouse

385601

CTG...

LLP...

CTG

ncRNA
sORF
InCDS
Overlapping
Intronic

Liver, Brain, E14,
BMDC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36509	ENSMUST00000147648	Ndufb10-206	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq	weak	3	sORFs_org_Mouse

384167

183

CTG...

LTG...

CTG

Intronic
sORF

B_cell, Brain, Liver,
BMDC, Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379806	ENSMUST00000144285	Ndufb10-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq		4	sORFs_org_Mouse

37661

153

GTG...

VYP...

GTG

ncRNA
sORF
Intronic

Liver, Brain, R1E,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36509	ENSMUST00000147648	Ndufb10-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq		4	sORFs_org_Mouse

1194381

ACG...

TKA...

ACG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36509	ENSMUST00000147648	Ndufb10-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

389733

207

CTG...

LLQ...

CTG

InCDS
Overlapping
sORF

3T3, BMDC, Brain,
E14, Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

956353

ATT...

ILG...

ATT

sORF
ncRNA

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
704641	ENSMUST00000135708	Ndufb10-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
36509	ENSMUST00000147648	Ndufb10-206	processed_transcript	Ribo-seq	weak	1	sORFs_org_Mouse

481753

CTG...

LCQ...

CTG

Intronic
sORF
Alternative
InCDS
Overlapping

E14, Liver, NSC,
Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379806	ENSMUST00000144285	Ndufb10-205	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
702481	ENSMUST00000141324	Ndufb10-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

387928

CTG...

LAR...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic
ncRNA

Brain, R1E, E14,
Liver, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse
36509	ENSMUST00000147648	Ndufb10-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
704641	ENSMUST00000135708	Ndufb10-203	protein_coding	Ribo-seq		4	sORFs_org_Mouse

388768

192

CTG...

LLQ...

CTG

Intronic
sORF

BMDC, Brain, Neutrophil,
R1E, B_cell, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq		4	sORFs_org_Mouse
379806	ENSMUST00000144285	Ndufb10-205	retained_intron	Ribo-seq		3	sORFs_org_Mouse

980587

CTG...

LPE...

CTG

Intronic
sORF

Liver, BMDC, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
702481	ENSMUST00000141324	Ndufb10-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
379806	ENSMUST00000144285	Ndufb10-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

483931

GTG...

VMF...

GTG

InCDS
Overlapping
sORF

3T3, Liver, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
704641	ENSMUST00000135708	Ndufb10-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

483684

ATG...

MFC...

ATG

sORF
InCDS
Overlapping

MEF, v6-5, 3T3,
Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
704641	ENSMUST00000135708	Ndufb10-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

383389

111

TTG...

LLK...

TTG

ncRNA
sORF
Intronic
Overlapping
Upstream

Liver, BMDC, R1E,
3T3, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36509	ENSMUST00000147648	Ndufb10-206	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

709295

GTG...

VPR...

GTG

Intronic
sORF

3T3, Neutrophil, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
702481	ENSMUST00000141324	Ndufb10-204	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
379806	ENSMUST00000144285	Ndufb10-205	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

390670

144

ATG...

MPR...

ATG

InCDS
Overlapping
sORF

3T3, BMDC, Brain,
E14, Glioma, Liver,
MEF, MESC, Spleen_B_cell,
R1E, v6-5,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq		7	sORFs_org_Mouse Johnstone2016
704641	ENSMUST00000135708	Ndufb10-203	protein_coding	Ribo-seq		5	sORFs_org_Mouse
3380784	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

38185

CTG...

LAK...

CTG

Intronic
sORF

BMDC, R1E, Testis,
Brain, E14, Liver,
MEF, v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
379806	ENSMUST00000144285	Ndufb10-205	retained_intron	Ribo-seq	moderate	6	sORFs_org_Mouse
702481	ENSMUST00000141324	Ndufb10-204	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

383515

ATG...

MFC...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping

B_cell, Brain, Liver,
MEF, v6-5, Spleen_B_cell,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379806	ENSMUST00000144285	Ndufb10-205	retained_intron	Ribo-seq		5	sORFs_org_Mouse
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

483110

ATG...

MRL...

ATG

InCDS
Overlapping
sORF

3T3, Spleen_B_cell, MEF,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
704641	ENSMUST00000135708	Ndufb10-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1005126

GTG...

VTL...

GTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1193196

159

AAG...

KDV...

AAG

ncRNA
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36509	ENSMUST00000147648	Ndufb10-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

389075

156

TTG...

LND...

TTG

InCDS
Overlapping
sORF

3T3, BMDC, Brain,
E14, Liver, Spleen_B_cell,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse
704641	ENSMUST00000135708	Ndufb10-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse

36508

TTG...

LTK...

TTG

Intronic
sORF
ncRNA

Brain, R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq		3	sORFs_org_Mouse
36509	ENSMUST00000147648	Ndufb10-206	processed_transcript	Ribo-seq		2	sORFs_org_Mouse

704640

105

GTG...

VGR...

GTG

ncRNA
sORF
Intronic

Liver, 3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36509	ENSMUST00000147648	Ndufb10-206	processed_transcript	Ribo-seq	moderate	1	sORFs_org_Mouse
704641	ENSMUST00000135708	Ndufb10-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

37681

129

GTG...

VPD...

GTG

Intronic
sORF

Neutrophil, Testis, B_cell,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
379806	ENSMUST00000144285	Ndufb10-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse

37089

GTG...

VDW...

GTG

ncRNA
sORF
Intronic

Testis, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36509	ENSMUST00000147648	Ndufb10-206	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1048020

GTG...

VER...

GTG

ncRNA
sORF
Intronic

E14, BMDC, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36509	ENSMUST00000147648	Ndufb10-206	processed_transcript	Ribo-seq	strong	1	sORFs_org_Mouse
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse

390029

234

TTG...

LGL...

TTG

InCDS
Overlapping
sORF

Brain, Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

389475

198

CTG...

LTG...

CTG

InCDS
Overlapping
sORF

3T3, BMDC, Brain,
E14, Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse

388288

ATG...

MCT...

ATG

InCDS
Overlapping
sORF
Intronic
ncRNA

3T3, Brain, Glioma,
Liver, MEF, MESC,
R1E, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse Johnstone2016
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
36509	ENSMUST00000147648	Ndufb10-206	processed_transcript	Ribo-seq	moderate	2	sORFs_org_Mouse

387993

GTG...

VMF...

GTG

Intronic
sORF
Alternative
InCDS
Overlapping

BMDC, R1E, B_cell,
Brain, Liver, MEF,
v6-5, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse
379806	ENSMUST00000144285	Ndufb10-205	retained_intron	Ribo-seq		5	sORFs_org_Mouse
383390	ENSMUST00000045602	Ndufb10-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1048677

234

TTG...

LGL...

TTG

sORF

Brain, Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
704641	ENSMUST00000135708	Ndufb10-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1152624

ATG...

MRL...

ATG

Intronic
sORF

MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
379806	ENSMUST00000144285	Ndufb10-205	retained_intron	Ribo-seq		2	sORFs_org_Mouse

1541426

219

TTG...

LGL...

TTG

Intronic
sORF

Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
36287	ENSMUST00000129451	Ndufb10-202	retained_intron	Ribo-seq		2	sORFs_org_Mouse

954325

ACG...

TTA...

ACG

sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
704641	ENSMUST00000135708	Ndufb10-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

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