Gene NCBI:68198 | MetamORF

Gene

ID CARD

NCBI:68198

Aliases

1810011O01Rik
8kDa, AGGG, AI325567
CI-AGGG, ENSMUSG00000002416, MGI:1915448
NCBI:68198, Ndufb2, OFF:Ndufb2

Chromosome

Transcripts

26 ORFs
5 known transcripts
56 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

192354

ENSMUST00000146793

Ndufb2-206

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
204855	66	CTG ...	LAV ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Intronic sORF	Brain, Spleen_B_cell
204252	57	GTG ...	VYI ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, Spleen_B_cell
1561180	132	CTG ...	LIS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
201984	144	TTG ...	LLV ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	Brain
1023087	159	GTG ...	VGT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain
1316836	123	CTG ...	LSG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
68381	132	CTG ...	LRS ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	BMDC, Brain
192353	54	CTG ...	LLR ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	Brain, Spleen_B_cell
195686	84	CTG ...	LVP ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, Liver, Spleen_B_cell
197914	60	GTG ...	VVY ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Intronic sORF	BMDC, Brain, Spleen_B_cell
193414	105	GTG ...	VIQ ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Intronic sORF	Brain
201228	33	GTG ...	VVL ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	BMDC, Brain
199185	84	TTG ...	LLC ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Intronic sORF	Brain, Spleen_B_cell

206692

ENSMUST00000135671

Ndufb2-205

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
204252	57	GTG ...	VYI ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
68381	132	CTG ...	LRS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	C2C12
207520	189	GTG ...	VGT ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, BMDC, Brain, E14, NSC, R1E
529182	63	ATG ...	MKN ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Downstream Overlapping sORF	3T3, v6-5
529011	39	ATG ...	MTR ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Downstream Overlapping sORF	3T3, NSC, v6-5
204855	66	CTG ...	LAV ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
201228	33	GTG ...	VVL ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
209526	87	CTG ...	LMT ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Downstream Overlapping sORF	Brain
209824	84	ATG ...	MTR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Downstream Overlapping sORF	Brain, E14
197914	60	GTG ...	VVY ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
206691	117	CTG ...	LPR ...	Ribo-seq	CTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, Liver, NSC, R1E
2782	42	CTG ...	LMT ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Downstream Overlapping sORF	3T3, v6-5
210061	90	CTG ...	LET ...	Ribo-seq	CTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, Liver, Neutrophil, R1E, v6-5
210660	108	ATG ...	MKN ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Downstream Overlapping sORF	Brain, MEF
209254	174	TTG ...	LLV ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	3T3, BMDC, Brain, E14, NSC, R1E
415647	162	CTG ...	LRS ...	Ribo-seq	CTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, C2C12, E14, Neutrophil, NSC, R1E
209224	81	GTG ...	VES ...	Ribo-seq	GTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, Liver, Neutrophil, R1E, v6-5

2783

ENSMUST00000002490

Ndufb2-201

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
204855	66	CTG ...	LAV ...	Ribo-seq	CTG	strong	4	sORFs_org_Mouse	ncRNA sORF	BMDC, Liver, R1E
195686	84	CTG ...	LVP ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	ncRNA sORF	BMDC, E14, Liver, Neutrophil, R1E
1316836	123	CTG ...	LSG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	ncRNA sORF	E14
199185	84	TTG ...	LLC ...	Ribo-seq	TTG		4	sORFs_org_Mouse	ncRNA sORF	BMDC, Liver, R1E
2782	42	CTG ...	LMT ...	Ribo-seq	CTG		5	sORFs_org_Mouse	ncRNA sORF	MEF, NSC, R1E, Skin_tumor
204252	57	GTG ...	VYI ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	ncRNA sORF	Liver, R1E
529182	63	ATG ...	MKN ...	Ribo-seq	ATG		5	sORFs_org_Mouse	ncRNA sORF	MEF, Neutrophil, NSC, R1E
3196	30	CTG ...	LGI ...	Ribo-seq	CTG	strong	6	sORFs_org_Mouse	ncRNA sORF	MEF, Neutrophil, R1E, Skin_tumor
201228	33	GTG ...	VVL ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	ncRNA sORF	MEF
197914	60	GTG ...	VVY ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	ncRNA sORF	Liver, R1E
192353	54	CTG ...	LLR ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	ncRNA sORF	E14, Neutrophil, R1E
529011	39	ATG ...	MTR ...	Ribo-seq	ATG		3	sORFs_org_Mouse	ncRNA sORF	MEF, R1E
193414	105	GTG ...	VIQ ...	Ribo-seq	GTG		9	sORFs_org_Mouse	ncRNA sORF	E14, Liver, MEF, Neutrophil, NSC, R1E

68382

ENSMUST00000119379

Ndufb2-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
415647	162	CTG ...	LRS ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, Liver, MEF, Spleen_B_cell
209224	81	GTG ...	VES ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver, Spleen_B_cell
207520	189	GTG ...	VGT ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, Liver, Spleen_B_cell
1023087	159	GTG ...	VGT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain
209254	174	TTG ...	LLV ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	B_cell, Brain, Liver, MEF, Spleen_B_cell
206691	117	CTG ...	LPR ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Brain, Liver, MEF, Spleen_B_cell
201984	144	TTG ...	LLV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain
210061	90	CTG ...	LET ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Liver, Spleen_B_cell
68381	132	CTG ...	LRS ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, Liver, Testis

69463

ENSMUST00000128064

Ndufb2-203

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
529182	63	ATG ...	MKN ...	Ribo-seq	ATG	weak	4	sORFs_org_Mouse	Intronic sORF	Brain, Liver, MEF, Spleen_B_cell
2782	42	CTG ...	LMT ...	Ribo-seq	CTG	weak	5	sORFs_org_Mouse	Intronic sORF	Brain, Liver, MEF, Spleen_B_cell
529011	39	ATG ...	MTR ...	Ribo-seq	ATG	weak	5	sORFs_org_Mouse	Intronic sORF	Brain, E14, Liver, MEF, Spleen_B_cell
3196	30	CTG ...	LGI ...	Ribo-seq	CTG	strong	8	sORFs_org_Mouse	Intronic sORF	Brain, E14, Liver, MEF, Spleen_B_cell, Testis

ORFs

26 ORFs
5 known transcripts
56 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

204855

CTG...

LAV...

CTG

Intronic
sORF
ncRNA
Alternative
InCDS
Overlapping
NMD

Brain, Spleen_B_cell, BMDC,
Liver, R1E, 3T3,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
192354	ENSMUST00000146793	Ndufb2-206	retained_intron	Ribo-seq	strong	2	sORFs_org_Mouse
2783	ENSMUST00000002490	Ndufb2-201	processed_transcript	Ribo-seq	strong	4	sORFs_org_Mouse
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
199959	ENSMUST00000126621	Gm42420-201	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

204252

GTG...

VYI...

GTG

Alternative
InCDS
Overlapping
sORF
Intronic
ncRNA
NMD

3T3, BMDC, Brain,
Spleen_B_cell, Liver, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
192354	ENSMUST00000146793	Ndufb2-206	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
2783	ENSMUST00000002490	Ndufb2-201	processed_transcript	Ribo-seq	moderate	3	sORFs_org_Mouse
199959	ENSMUST00000126621	Gm42420-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

195686

CTG...

LVP...

CTG

ncRNA
sORF
Intronic
NMD

BMDC, E14, Liver,
Neutrophil, R1E, Brain,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2783	ENSMUST00000002490	Ndufb2-201	processed_transcript	Ribo-seq	moderate	5	sORFs_org_Mouse
192354	ENSMUST00000146793	Ndufb2-206	retained_intron	Ribo-seq		5	sORFs_org_Mouse
199959	ENSMUST00000126621	Gm42420-201	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

415647

162

CTG...

LRS...

CTG

Alternative
InCDS
Overlapping
sORF

B_cell, Brain, Liver,
MEF, Spleen_B_cell, 3T3,
BMDC, C2C12, E14,
Neutrophil, NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
68382	ENSMUST00000119379	Ndufb2-202	protein_coding	Ribo-seq		6	sORFs_org_Mouse
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq		9	sORFs_org_Mouse

1561180

132

CTG...

LIS...

CTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
192354	ENSMUST00000146793	Ndufb2-206	retained_intron	Ribo-seq		1	sORFs_org_Mouse

68381

132

CTG...

LRS...

CTG

Alternative
InCDS
Overlapping
sORF
NMD
Intronic

C2C12, E14, BMDC,
Brain, Liver, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
199959	ENSMUST00000126621	Gm42420-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
192354	ENSMUST00000146793	Ndufb2-206	retained_intron	Ribo-seq		3	sORFs_org_Mouse
68382	ENSMUST00000119379	Ndufb2-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

201984

144

TTG...

LLV...

TTG

Intronic
sORF
Alternative
Overlapping
Upstream
NMD

Brain, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
192354	ENSMUST00000146793	Ndufb2-206	retained_intron	Ribo-seq		2	sORFs_org_Mouse
68382	ENSMUST00000119379	Ndufb2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
199959	ENSMUST00000126621	Gm42420-201	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1023087

159

GTG...

VGT...

GTG

Intronic
sORF
Alternative
Overlapping
Upstream

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
192354	ENSMUST00000146793	Ndufb2-206	retained_intron	Ribo-seq		1	sORFs_org_Mouse
68382	ENSMUST00000119379	Ndufb2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

207520

189

GTG...

VGT...

GTG

Alternative
Overlapping
sORF
Upstream

3T3, BMDC, Brain,
E14, NSC, R1E,
Liver, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq		6	sORFs_org_Mouse
68382	ENSMUST00000119379	Ndufb2-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

529182

ATG...

MKN...

ATG

Downstream
Overlapping
sORF
Intronic
ncRNA

3T3, v6-5, Brain,
Liver, MEF, Spleen_B_cell,
Neutrophil, NSC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse
69463	ENSMUST00000128064	Ndufb2-203	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse
2783	ENSMUST00000002490	Ndufb2-201	processed_transcript	Ribo-seq		5	sORFs_org_Mouse

1316836

123

CTG...

LSG...

CTG

ncRNA
sORF
Intronic

E14, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2783	ENSMUST00000002490	Ndufb2-201	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
192354	ENSMUST00000146793	Ndufb2-206	retained_intron	Ribo-seq		1	sORFs_org_Mouse

199185

TTG...

LLC...

TTG

ncRNA
sORF
Intronic

BMDC, Liver, R1E,
Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2783	ENSMUST00000002490	Ndufb2-201	processed_transcript	Ribo-seq		4	sORFs_org_Mouse
192354	ENSMUST00000146793	Ndufb2-206	retained_intron	Ribo-seq		3	sORFs_org_Mouse

209224

GTG...

VES...

GTG

Alternative
InCDS
Overlapping
sORF

Liver, Spleen_B_cell, 3T3,
BMDC, Brain, E14,
Neutrophil, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
68382	ENSMUST00000119379	Ndufb2-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq		9	sORFs_org_Mouse

529011

ATG...

MTR...

ATG

Downstream
Overlapping
sORF
Intronic
ncRNA

3T3, NSC, v6-5,
Brain, E14, Liver,
MEF, Spleen_B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq		3	sORFs_org_Mouse
69463	ENSMUST00000128064	Ndufb2-203	retained_intron	Ribo-seq	weak	5	sORFs_org_Mouse
2783	ENSMUST00000002490	Ndufb2-201	processed_transcript	Ribo-seq		3	sORFs_org_Mouse

2782

CTG...

LMT...

CTG

ncRNA
sORF
Intronic
Downstream
Overlapping

MEF, NSC, R1E,
Skin_tumor, Brain, Liver,
Spleen_B_cell, 3T3, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2783	ENSMUST00000002490	Ndufb2-201	processed_transcript	Ribo-seq		5	sORFs_org_Mouse
69463	ENSMUST00000128064	Ndufb2-203	retained_intron	Ribo-seq	weak	5	sORFs_org_Mouse
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse

201228

GTG...

VVL...

GTG

Alternative
InCDS
Overlapping
sORF
ncRNA
Intronic
NMD

3T3, MEF, BMDC,
Brain, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
2783	ENSMUST00000002490	Ndufb2-201	processed_transcript	Ribo-seq	moderate	4	sORFs_org_Mouse
192354	ENSMUST00000146793	Ndufb2-206	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
199959	ENSMUST00000126621	Gm42420-201	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

192353

CTG...

LLR...

CTG

Intronic
sORF
ncRNA

Brain, Spleen_B_cell, E14,
Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
192354	ENSMUST00000146793	Ndufb2-206	retained_intron	Ribo-seq		3	sORFs_org_Mouse
2783	ENSMUST00000002490	Ndufb2-201	processed_transcript	Ribo-seq	weak	3	sORFs_org_Mouse

209526

CTG...

LMT...

CTG

Downstream
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse

209824

ATG...

MTR...

ATG

Downstream
Overlapping
sORF

Brain, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse

3196

CTG...

LGI...

CTG

ncRNA
sORF
Intronic

MEF, Neutrophil, R1E,
Skin_tumor, Brain, E14,
Liver, Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
2783	ENSMUST00000002490	Ndufb2-201	processed_transcript	Ribo-seq	strong	6	sORFs_org_Mouse
69463	ENSMUST00000128064	Ndufb2-203	retained_intron	Ribo-seq	strong	8	sORFs_org_Mouse

197914

GTG...

VVY...

GTG

Alternative
InCDS
Overlapping
sORF
NMD
ncRNA
Intronic

3T3, v6-5, Liver,
R1E, BMDC, Brain,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
199959	ENSMUST00000126621	Gm42420-201	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
2783	ENSMUST00000002490	Ndufb2-201	processed_transcript	Ribo-seq	strong	3	sORFs_org_Mouse
192354	ENSMUST00000146793	Ndufb2-206	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse

206691

117

CTG...

LPR...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, Brain,
E14, Liver, NSC,
R1E, B_cell, MEF,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq		7	sORFs_org_Mouse
68382	ENSMUST00000119379	Ndufb2-202	protein_coding	Ribo-seq		5	sORFs_org_Mouse

209254

174

TTG...

LLV...

TTG

Alternative
Overlapping
sORF
Upstream

B_cell, Brain, Liver,
MEF, Spleen_B_cell, 3T3,
BMDC, E14, NSC,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
68382	ENSMUST00000119379	Ndufb2-202	protein_coding	Ribo-seq		6	sORFs_org_Mouse
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq		6	sORFs_org_Mouse

210061

CTG...

LET...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, Brain,
E14, Liver, Neutrophil,
R1E, v6-5, B_cell,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq		8	sORFs_org_Mouse
68382	ENSMUST00000119379	Ndufb2-202	protein_coding	Ribo-seq		4	sORFs_org_Mouse

193414

105

GTG...

VIQ...

GTG

Intronic
sORF
ncRNA

Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
192354	ENSMUST00000146793	Ndufb2-206	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
2783	ENSMUST00000002490	Ndufb2-201	processed_transcript	Ribo-seq		9	sORFs_org_Mouse

210660

108

ATG...

MKN...

ATG

Downstream
Overlapping
sORF

Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
206692	ENSMUST00000135671	Ndufb2-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse

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