Gene NCBI:66973 | MetamORF

Gene

ID CARD

NCBI:66973

Aliases

2400002C15Rik
ENSMUSG00000024436, MGI:1914223, MRP-S18-2
Mrps18b, NCBI:66973, OFF:Mrps18b
S18mt-b

Chromosome

Transcripts

19 ORFs
5 known transcripts
40 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

39147

ENSMUST00000174807

Mrps18b-208

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
704479	66	CTG ...	LTT ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF	3T3, B_cell
702625	39	GTG ...	VCH ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF	3T3, B_cell
708090	36	TTG ...	LPN ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	sORF	3T3
391971	147	CTG ...	LFG ...	Ribo-seq	CTG		5	sORFs_org_Mouse	sORF	3T3, B_cell, Brain, Liver, R1E
382253	60	TTG ...	LLG ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	3T3, B_cell
390226	138	CTG ...	LTT ...	Ribo-seq	CTG		5	sORFs_org_Mouse	sORF	3T3, B_cell, Brain, Liver, R1E
707373	75	CTG ...	LFG ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF	3T3, B_cell
391841	63	TTG ...	LLG ...	Ribo-seq	TTG		5	sORFs_org_Mouse	sORF	3T3, B_cell, Brain, Liver, R1E
389749	111	GTG ...	VCH ...	Ribo-seq	GTG		5	sORFs_org_Mouse	sORF	3T3, B_cell, Brain, Liver, R1E
387542	42	GTG ...	VVC ...	Ribo-seq	GTG		3	sORFs_org_Mouse	sORF	3T3, B_cell, Brain
381458	57	CTG ...	LGI ...	Ribo-seq	CTG		2	sORFs_org_Mouse	sORF	3T3, B_cell
391429	159	ATG ...	MAL ...	Ribo-seq	ATG		6	sORFs_org_Mouse	sORF	3T3, B_cell, BMDC, Brain, Liver, R1E
706271	87	ATG ...	MAL ...	Ribo-seq	ATG		2	sORFs_org_Mouse	sORF	3T3, B_cell
39146	114	GTG ...	VVC ...	Ribo-seq	GTG		6	sORFs_org_Mouse	sORF	3T3, B_cell, Brain, Liver, R1E, Testis
389067	60	CTG ...	LGI ...	Ribo-seq	CTG		5	sORFs_org_Mouse	sORF	3T3, B_cell, Brain, Liver, R1E

1048613

ENSMUST00000025305

Mrps18b-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
391971	147	CTG ...	LFG ...	Ribo-seq	CTG		5	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, Neutrophil, v6-5
391429	159	ATG ...	MAL ...	Ribo-seq	ATG		5	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, Neutrophil, v6-5
389749	111	GTG ...	VCH ...	Ribo-seq	GTG		7	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, E14, MEF, Neutrophil, v6-5
39146	114	GTG ...	VVC ...	Ribo-seq	GTG		6	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, E14, MEF, Neutrophil, v6-5
387542	42	GTG ...	VVC ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
390226	138	CTG ...	LTT ...	Ribo-seq	CTG		4	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, Neutrophil, v6-5
389067	60	CTG ...	LGI ...	Ribo-seq	CTG		7	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, E14, MEF, Neutrophil, v6-5
702625	39	GTG ...	VCH ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
391841	63	TTG ...	LLG ...	Ribo-seq	TTG		7	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC, E14, MEF, Neutrophil, v6-5

38659

ENSMUST00000174349

Mrps18b-206

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
706271	87	ATG ...	MAL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	E14
39121	195	CTG ...	LVL ...	Ribo-seq	CTG		9	sORFs_org_Mouse	sORF	3T3, B_cell, Brain, Liver, MEF, Neutrophil, Spleen_B_cell, Testis, v6-5
38658	189	TTG ...	LIS ...	Ribo-seq	TTG		11	sORFs_org_Mouse	sORF	3T3, B_cell, Brain, E14, Liver, MEF, Neutrophil, Spleen_B_cell, Testis, v6-5
1194599	30	ATC ...	ITS ...	Ribo-seq	ATC		1	sORFs_org_Mouse	sORF	E14
702625	39	GTG ...	VCH ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	E14

854369

ENSMUST00000174574

Mrps18b-207

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
702625	39	GTG ...	VCH ...	Ribo-seq	GTG		8	sORFs_org_Mouse	Intronic sORF	E14, Liver, MEF, Neutrophil, R1E, v6-5
706271	87	ATG ...	MAL ...	Ribo-seq	ATG		6	sORFs_org_Mouse	Intronic sORF	E14, Liver, MEF, Neutrophil, R1E
381458	57	CTG ...	LGI ...	Ribo-seq	CTG	moderate	7	sORFs_org_Mouse	Intronic sORF	E14, Liver, MEF, R1E, v6-5
708090	36	TTG ...	LPN ...	Ribo-seq	TTG	weak	4	sORFs_org_Mouse	Intronic sORF	E14, MEF, R1E, v6-5
704479	66	CTG ...	LTT ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Intronic sORF	E14, Liver, MEF, Neutrophil, R1E
707373	75	CTG ...	LFG ...	Ribo-seq	CTG		6	sORFs_org_Mouse	Intronic sORF	E14, Liver, MEF, Neutrophil, R1E
387542	42	GTG ...	VVC ...	Ribo-seq	GTG		8	sORFs_org_Mouse	Intronic sORF	E14, Liver, MEF, Neutrophil, R1E, v6-5
855805	45	GTG ...	VPP ...	Ribo-seq	GTG		9	sORFs_org_Mouse	Intronic sORF	E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
382253	60	TTG ...	LLG ...	Ribo-seq	TTG	moderate	7	sORFs_org_Mouse	Intronic sORF	E14, Liver, MEF, R1E, v6-5

381459

ENSMUST00000172642

Mrps18b-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
381458	57	CTG ...	LGI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Brain
382253	60	TTG ...	LLG ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	BMDC, Brain

ORFs

19 ORFs
5 known transcripts
40 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

704479

CTG...

LTT...

CTG

sORF
Intronic

3T3, B_cell, E14,
Liver, MEF, Neutrophil,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39147	ENSMUST00000174807	Mrps18b-208	protein_coding	Ribo-seq		2	sORFs_org_Mouse
854369	ENSMUST00000174574	Mrps18b-207	retained_intron	Ribo-seq		6	sORFs_org_Mouse

702625

GTG...

VCH...

GTG

sORF
Intronic
Alternative
InCDS
Overlapping

3T3, B_cell, E14,
Liver, MEF, Neutrophil,
R1E, v6-5, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39147	ENSMUST00000174807	Mrps18b-208	protein_coding	Ribo-seq		2	sORFs_org_Mouse
854369	ENSMUST00000174574	Mrps18b-207	retained_intron	Ribo-seq		8	sORFs_org_Mouse
38659	ENSMUST00000174349	Mrps18b-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1048613	ENSMUST00000025305	Mrps18b-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

391971

147

CTG...

LFG...

CTG

InCDS
Overlapping
sORF

E14, MEF, Neutrophil,
v6-5, 3T3, B_cell,
Brain, Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1048613	ENSMUST00000025305	Mrps18b-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse
39147	ENSMUST00000174807	Mrps18b-208	protein_coding	Ribo-seq		5	sORFs_org_Mouse

391429

159

ATG...

MAL...

ATG

InCDS
Overlapping
sORF

E14, MEF, Neutrophil,
v6-5, 3T3, B_cell,
BMDC, Brain, Liver,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1048613	ENSMUST00000025305	Mrps18b-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse
39147	ENSMUST00000174807	Mrps18b-208	protein_coding	Ribo-seq		6	sORFs_org_Mouse

706271

ATG...

MAL...

ATG

sORF
Intronic

E14, Liver, MEF,
Neutrophil, R1E, 3T3,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38659	ENSMUST00000174349	Mrps18b-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
854369	ENSMUST00000174574	Mrps18b-207	retained_intron	Ribo-seq		6	sORFs_org_Mouse
39147	ENSMUST00000174807	Mrps18b-208	protein_coding	Ribo-seq		2	sORFs_org_Mouse

39121

195

CTG...

LVL...

CTG

sORF

3T3, B_cell, Brain,
Liver, MEF, Neutrophil,
Spleen_B_cell, Testis, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38659	ENSMUST00000174349	Mrps18b-206	protein_coding	Ribo-seq		9	sORFs_org_Mouse

708090

TTG...

LPN...

TTG

sORF
Intronic

3T3, E14, MEF,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39147	ENSMUST00000174807	Mrps18b-208	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
854369	ENSMUST00000174574	Mrps18b-207	retained_intron	Ribo-seq	weak	4	sORFs_org_Mouse

381458

CTG...

LGI...

CTG

sORF
Intronic

Brain, E14, Liver,
MEF, R1E, v6-5,
3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
381459	ENSMUST00000172642	Mrps18b-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
854369	ENSMUST00000174574	Mrps18b-207	retained_intron	Ribo-seq	moderate	7	sORFs_org_Mouse
39147	ENSMUST00000174807	Mrps18b-208	protein_coding	Ribo-seq		2	sORFs_org_Mouse

389749

111

GTG...

VCH...

GTG

InCDS
Overlapping
sORF

BMDC, E14, MEF,
Neutrophil, v6-5, 3T3,
B_cell, Brain, Liver,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1048613	ENSMUST00000025305	Mrps18b-201	protein_coding	Ribo-seq		7	sORFs_org_Mouse
39147	ENSMUST00000174807	Mrps18b-208	protein_coding	Ribo-seq		5	sORFs_org_Mouse

382253

TTG...

LLG...

TTG

sORF
Intronic

3T3, B_cell, BMDC,
Brain, E14, Liver,
MEF, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39147	ENSMUST00000174807	Mrps18b-208	protein_coding	Ribo-seq		2	sORFs_org_Mouse
381459	ENSMUST00000172642	Mrps18b-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse
854369	ENSMUST00000174574	Mrps18b-207	retained_intron	Ribo-seq	moderate	7	sORFs_org_Mouse

38658

189

TTG...

LIS...

TTG

sORF

3T3, B_cell, Brain,
E14, Liver, MEF,
Neutrophil, Spleen_B_cell, Testis,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38659	ENSMUST00000174349	Mrps18b-206	protein_coding	Ribo-seq		11	sORFs_org_Mouse

390226

138

CTG...

LTT...

CTG

sORF
InCDS
Overlapping

3T3, B_cell, Brain,
Liver, R1E, E14,
MEF, Neutrophil, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39147	ENSMUST00000174807	Mrps18b-208	protein_coding	Ribo-seq		5	sORFs_org_Mouse
1048613	ENSMUST00000025305	Mrps18b-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

707373

CTG...

LFG...

CTG

sORF
Intronic

3T3, B_cell, E14,
Liver, MEF, Neutrophil,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39147	ENSMUST00000174807	Mrps18b-208	protein_coding	Ribo-seq		2	sORFs_org_Mouse
854369	ENSMUST00000174574	Mrps18b-207	retained_intron	Ribo-seq		6	sORFs_org_Mouse

391841

TTG...

LLG...

TTG

sORF
InCDS
Overlapping

3T3, B_cell, Brain,
Liver, R1E, BMDC,
E14, MEF, Neutrophil,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
39147	ENSMUST00000174807	Mrps18b-208	protein_coding	Ribo-seq		5	sORFs_org_Mouse
1048613	ENSMUST00000025305	Mrps18b-201	protein_coding	Ribo-seq		7	sORFs_org_Mouse

39146

114

GTG...

VVC...

GTG

InCDS
Overlapping
sORF

BMDC, E14, MEF,
Neutrophil, v6-5, 3T3,
B_cell, Brain, Liver,
R1E, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1048613	ENSMUST00000025305	Mrps18b-201	protein_coding	Ribo-seq		6	sORFs_org_Mouse
39147	ENSMUST00000174807	Mrps18b-208	protein_coding	Ribo-seq		6	sORFs_org_Mouse

387542

GTG...

VVC...

GTG

Alternative
InCDS
Overlapping
sORF
Intronic

BMDC, 3T3, B_cell,
Brain, E14, Liver,
MEF, Neutrophil, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1048613	ENSMUST00000025305	Mrps18b-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
39147	ENSMUST00000174807	Mrps18b-208	protein_coding	Ribo-seq		3	sORFs_org_Mouse
854369	ENSMUST00000174574	Mrps18b-207	retained_intron	Ribo-seq		8	sORFs_org_Mouse

389067

CTG...

LGI...

CTG

InCDS
Overlapping
sORF

BMDC, E14, MEF,
Neutrophil, v6-5, 3T3,
B_cell, Brain, Liver,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1048613	ENSMUST00000025305	Mrps18b-201	protein_coding	Ribo-seq		7	sORFs_org_Mouse
39147	ENSMUST00000174807	Mrps18b-208	protein_coding	Ribo-seq		5	sORFs_org_Mouse

1194599

ATC...

ITS...

ATC

sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
38659	ENSMUST00000174349	Mrps18b-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

855805

GTG...

VPP...

GTG

Intronic
sORF

E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
854369	ENSMUST00000174574	Mrps18b-207	retained_intron	Ribo-seq		9	sORFs_org_Mouse

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