Metam
ORF

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Gene

Gene

ID CARD

ID

NCBI:66845

Aliases

0610009M10Rik
ENSMUSG00000106918, L33mt, MGI:2137225
MRP-L33, Mrpl33, NCBI:66845
OFF:Mrpl33

Chromosome

5

Transcripts

32 ORFs
8 known transcripts
66 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

1085210 ENSMUST00000031024 Mrpl33-201 protein_coding
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

173122 36

GTG ...

VRH ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    Downstream
    sORF
MEF
182836 120

CTG ...

LQC ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
R1E
520838 33

GTG ...

VDH ...

Ribo-seq
GTG

3 sORFs_org_Mouse
    Alternative
    Overlapping
    sORF
    Upstream
MEF, v6-5
183158 108

ATG ...

MKT ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    Alternative
    Downstream
    sORF
R1E
175227 51

ATG ...

MRS ...

Ribo-seq
ATG

weak

1 sORFs_org_Mouse
    Downstream
    sORF
R1E
64073 54

CTG ...

LGQ ...

Ribo-seq
CTG

strong

1 sORFs_org_Mouse
    InCDS
    Overlapping
    sORF
R1E
171964 ENSMUST00000201483 Mrpl33-202 processed_transcript
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

414462 39

AAG ...

KPT ...

Ribo-seq
AAG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
C2C12
186396 138

GTG ...

VSQ ...

Ribo-seq
GTG

13 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Brain, E14,
Liver, MEF, Neutrophil,
NSC, Spleen_B_cell, v6-5
181194 96

TTG ...

LLH ...

Ribo-seq
TTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
188078 150

CTG ...

LVK ...

Ribo-seq
CTG

14 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, Brain, C2C12,
Liver, MEF, Neutrophil,
NSC, Spleen_B_cell, v6-5
64073 54

CTG ...

LGQ ...

Ribo-seq
CTG

strong

2 sORFs_org_Mouse
    ncRNA
    sORF
Brain, C2C12
183158 108

ATG ...

MKT ...

Ribo-seq
ATG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
175227 51

ATG ...

MRS ...

Ribo-seq
ATG

weak

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
188648 147

GTG ...

VKL ...

Ribo-seq
GTG

14 sORFs_org_Mouse
    ncRNA
    sORF
B_cell, BMDC, Brain,
E14, Liver, MEF,
Neutrophil, NSC, Spleen_B_cell,
v6-5
182836 120

CTG ...

LQC ...

Ribo-seq
CTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
173122 36

GTG ...

VRH ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
66129 30

GTG ...

VEQ ...

Ribo-seq
GTG

moderate

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
62451 168

CTG ...

LVK ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
C2C12
559517 ENSMUST00000201999 Mrpl33-207 processed_transcript
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

183158 108

ATG ...

MKT ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    ncRNA
    sORF
3T3
167236 33

CTG ...

LLS ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
3T3
66042 36

TTG ...

LWN ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    ncRNA
    sORF
3T3, Brain
64073 54

CTG ...

LGQ ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
3T3
66129 30

GTG ...

VEQ ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
3T3
520838 33

GTG ...

VDH ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    ncRNA
    sORF
3T3, BMDC
1061705 ENSMUST00000201620 Mrpl33-203 retained_intron
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

175227 51

ATG ...

MRS ...

Ribo-seq
ATG

weak

3 sORFs_org_Mouse
    Intronic
    sORF
MEF, v6-5
64073 54

CTG ...

LGQ ...

Ribo-seq
CTG

strong

9 sORFs_org_Mouse
    Intronic
    sORF
BMDC, E14, Liver,
MEF, Neutrophil, NSC,
v6-5
1063019 39

CTG ...

LSS ...

Ribo-seq
CTG

weak

2 sORFs_org_Mouse
    Intronic
    sORF
Neutrophil, v6-5
183158 108

ATG ...

MKT ...

Ribo-seq
ATG

moderate

3 sORFs_org_Mouse
    Intronic
    sORF
E14, MEF, v6-5
66042 36

TTG ...

LWN ...

Ribo-seq
TTG

weak

5 sORFs_org_Mouse
    Intronic
    sORF
E14, MEF, NSC
62451 168

CTG ...

LVK ...

Ribo-seq
CTG

4 sORFs_org_Mouse
    Intronic
    sORF
BMDC, Liver, Neutrophil,
NSC
62058 165

GTG ...

VKL ...

Ribo-seq
GTG

3 sORFs_org_Mouse
    Intronic
    sORF
Liver, Neutrophil, NSC
64476 156

GTG ...

VSQ ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    Intronic
    sORF
Liver, Neutrophil
181194 96

TTG ...

LLH ...

Ribo-seq
TTG

4 sORFs_org_Mouse
    Intronic
    sORF
E14, Liver, MEF,
NSC
66129 30

GTG ...

VEQ ...

Ribo-seq
GTG

moderate

8 sORFs_org_Mouse
    Intronic
    sORF
BMDC, E14, Liver,
MEF, Neutrophil, NSC
182836 120

CTG ...

LQC ...

Ribo-seq
CTG

moderate

2 sORFs_org_Mouse
    Intronic
    sORF
MEF, v6-5
173122 36

GTG ...

VRH ...

Ribo-seq
GTG

moderate

4 sORFs_org_Mouse
    Intronic
    sORF
E14, MEF, v6-5
62059 ENSMUST00000202243 Mrpl33-208 processed_transcript
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

66491 114

CTG ...

LVK ...

Ribo-seq
CTG

9 sORFs_org_Mouse
    ncRNA
    sORF
3T3, Brain, C2C12,
Liver, MEF, R1E,
Spleen_B_cell, Testis
62058 165

GTG ...

VKL ...

Ribo-seq
GTG

3 sORFs_org_Mouse
    ncRNA
    sORF
BMDC, Brain, Testis
64073 54

CTG ...

LGQ ...

Ribo-seq
CTG

strong

4 sORFs_org_Mouse
    ncRNA
    sORF
BMDC, Brain, Liver,
Testis
66574 42

CTG ...

LSL ...

Ribo-seq
CTG

13 sORFs_org_Mouse
    ncRNA
    sORF
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis
66625 111

GTG ...

VKL ...

Ribo-seq
GTG

10 sORFs_org_Mouse
    ncRNA
    sORF
3T3, BMDC, Brain,
E14, Liver, MEF,
R1E, Spleen_B_cell, Testis
62451 168

CTG ...

LVK ...

Ribo-seq
CTG

2 sORFs_org_Mouse
    ncRNA
    sORF
Brain, Testis
66685 108

CTG ...

LSL ...

Ribo-seq
CTG

11 sORFs_org_Mouse
    ncRNA
    sORF
3T3, BMDC, Brain,
E14, Liver, MEF,
R1E, Spleen_B_cell, Testis
67240 102

GTG ...

VSQ ...

Ribo-seq
GTG

8 sORFs_org_Mouse
    ncRNA
    sORF
3T3, Brain, E14,
Liver, MEF, R1E,
Spleen_B_cell, Testis
66129 30

GTG ...

VEQ ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    ncRNA
    sORF
Brain, Testis
66042 36

TTG ...

LWN ...

Ribo-seq
TTG

2 sORFs_org_Mouse
    ncRNA
    sORF
Liver, Testis
903471 72

ATA ...

IGK ...

Ribo-seq
ATA

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
183158 108

ATG ...

MKT ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    ncRNA
    sORF
BMDC
67440 33

CTG ...

LHY ...

Ribo-seq
CTG

8 sORFs_org_Mouse
    ncRNA
    sORF
Brain, E14, Liver,
Neutrophil, R1E, Testis
167236 33

CTG ...

LLS ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Brain
64476 156

GTG ...

VSQ ...

Ribo-seq
GTG

2 sORFs_org_Mouse
    ncRNA
    sORF
Brain, Testis
977401 ENSMUST00000201910 Mrpl33-205 nonsense_mediated_decay
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

62451 168

CTG ...

LVK ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    Alternative
    InCDS
    NMD
    Overlapping
    sORF
MEF
523434 ENSMUST00000202655 Mrpl33-209 processed_transcript
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

64476 156

GTG ...

VSQ ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
520838 33

GTG ...

VDH ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
MEF
1435107 33

CTG ...

LLS ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
Liver
1234827 45

AAG ...

KFS ...

Ribo-seq
AAG

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
175227 51

ATG ...

MRS ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
1239554 96

CTG ...

LSL ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
183158 108

ATG ...

MKT ...

Ribo-seq
ATG

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
523433 36

GTG ...

VDH ...

Ribo-seq
GTG

9 sORFs_org_Mouse
    ncRNA
    sORF
BMDC, Liver, MEF,
Neutrophil, NSC, Spleen_B_cell,
v6-5
62058 165

GTG ...

VKL ...

Ribo-seq
GTG

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
1238115 147

CTG ...

LSL ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
64073 54

CTG ...

LGQ ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
1239809 87

CTG ...

LHY ...

Ribo-seq
CTG

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
1240668 63

AGG ...

RFL ...

Ribo-seq
AGG

1 sORFs_org_Mouse
    ncRNA
    sORF
E14
3249079 UNKNOWN_TRANSCRIPT
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

183158 108

ATG ...

MKT ...

Predicted
ATG

1 Samandi2017
    sORF
985748 ENSMUST00000201923 Mrpl33-206 retained_intron
MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

64073 54

CTG ...

LGQ ...

Ribo-seq
CTG

strong

1 sORFs_org_Mouse
    Intronic
    sORF
Liver

ORFs

32 ORFs
8 known transcripts
66 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

173122 36

GTG...

VRH...

GTG Downstream
sORF
Intronic
ncRNA
MEF, E14, v6-5,
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1085210 ENSMUST00000031024 Mrpl33-201 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1061705 ENSMUST00000201620 Mrpl33-203 retained_intron Ribo-seq
moderate 4 sORFs_org_Mouse
171964 ENSMUST00000201483 Mrpl33-202 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
182836 120

CTG...

LQC...

CTG Alternative
Downstream
sORF
Intronic
ncRNA
R1E, MEF, v6-5,
Brain
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1085210 ENSMUST00000031024 Mrpl33-201 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
1061705 ENSMUST00000201620 Mrpl33-203 retained_intron Ribo-seq
moderate 2 sORFs_org_Mouse
171964 ENSMUST00000201483 Mrpl33-202 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
414462 39

AAG...

KPT...

AAG ncRNA
sORF
C2C12
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

171964 ENSMUST00000201483 Mrpl33-202 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
183158 108

ATG...

MKT...

ATG ncRNA
sORF
Intronic
Alternative
Downstream
3T3, E14, MEF,
v6-5, R1E, Brain,
Glioma, Liver,
MESC, BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

559517 ENSMUST00000201999 Mrpl33-207 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1061705 ENSMUST00000201620 Mrpl33-203 retained_intron Ribo-seq
moderate 3 sORFs_org_Mouse
1085210 ENSMUST00000031024 Mrpl33-201 protein_coding Ribo-seq
moderate 1 sORFs_org_Mouse
171964 ENSMUST00000201483 Mrpl33-202 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
523434 ENSMUST00000202655 Mrpl33-209 processed_transcript Ribo-seq
1 sORFs_org_Mouse
3249079 UNKNOWN_TRANSCRIPT Predicted
1 Samandi2017
62059 ENSMUST00000202243 Mrpl33-208 processed_transcript Ribo-seq
1 sORFs_org_Mouse
186396 138

GTG...

VSQ...

GTG ncRNA
sORF
B_cell, Brain, E14,
Liver, MEF, Neutrophil,
NSC, Spleen_B_cell, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

171964 ENSMUST00000201483 Mrpl33-202 processed_transcript Ribo-seq
13 sORFs_org_Mouse
175227 51

ATG...

MRS...

ATG Intronic
sORF
Downstream
ncRNA
MEF, v6-5, Glioma,
Liver, MESC, Brain,
E14, R1E
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1061705 ENSMUST00000201620 Mrpl33-203 retained_intron Ribo-seq
weak 3 sORFs_org_Mouse
2406883 ENSMUST00000031024 Mrpl33-201 protein_coding Ribo-seq
weak 1 Johnstone2016
171964 ENSMUST00000201483 Mrpl33-202 processed_transcript Ribo-seq
weak 1 sORFs_org_Mouse
523434 ENSMUST00000202655 Mrpl33-209 processed_transcript Ribo-seq
1 sORFs_org_Mouse
167236 33

CTG...

LLS...

CTG ncRNA
sORF
3T3, Brain, Liver,
Neutrophil, NSC, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

559517 ENSMUST00000201999 Mrpl33-207 processed_transcript Ribo-seq
1 sORFs_org_Mouse
167237 ENSMUST00000202033 Gm43809-202 processed_transcript Ribo-seq
2 sORFs_org_Mouse
517423 ENSMUST00000200694 Gm43809-201 processed_transcript Ribo-seq
3 sORFs_org_Mouse
62059 ENSMUST00000202243 Mrpl33-208 processed_transcript Ribo-seq
1 sORFs_org_Mouse
66491 114

CTG...

LVK...

CTG ncRNA
sORF
3T3, Brain, C2C12,
Liver, MEF, R1E,
Spleen_B_cell, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

62059 ENSMUST00000202243 Mrpl33-208 processed_transcript Ribo-seq
9 sORFs_org_Mouse
64073 54

CTG...

LGQ...

CTG Intronic
sORF
ncRNA
InCDS
Overlapping
BMDC, E14, Liver,
MEF, Neutrophil, NSC,
v6-5, Brain, Testis,
3T3, C2C12, R1E,
B_cell, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1061705 ENSMUST00000201620 Mrpl33-203 retained_intron Ribo-seq
strong 9 sORFs_org_Mouse
62059 ENSMUST00000202243 Mrpl33-208 processed_transcript Ribo-seq
strong 4 sORFs_org_Mouse
559517 ENSMUST00000201999 Mrpl33-207 processed_transcript Ribo-seq
1 sORFs_org_Mouse
171964 ENSMUST00000201483 Mrpl33-202 processed_transcript Ribo-seq
strong 2 sORFs_org_Mouse
1085210 ENSMUST00000031024 Mrpl33-201 protein_coding Ribo-seq
strong 1 sORFs_org_Mouse
517423 ENSMUST00000200694 Gm43809-201 processed_transcript Ribo-seq
strong 2 sORFs_org_Mouse
523434 ENSMUST00000202655 Mrpl33-209 processed_transcript Ribo-seq
1 sORFs_org_Mouse
985748 ENSMUST00000201923 Mrpl33-206 retained_intron Ribo-seq
strong 1 sORFs_org_Mouse
181194 96

TTG...

LLH...

TTG ncRNA
sORF
Intronic
Brain, E14, Liver,
MEF, NSC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

171964 ENSMUST00000201483 Mrpl33-202 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1061705 ENSMUST00000201620 Mrpl33-203 retained_intron Ribo-seq
4 sORFs_org_Mouse
62058 165

GTG...

VKL...

GTG ncRNA
sORF
Intronic
BMDC, Brain, Testis,
B_cell, Liver, Neutrophil,
NSC, E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

62059 ENSMUST00000202243 Mrpl33-208 processed_transcript Ribo-seq
3 sORFs_org_Mouse
517423 ENSMUST00000200694 Gm43809-201 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1061705 ENSMUST00000201620 Mrpl33-203 retained_intron Ribo-seq
3 sORFs_org_Mouse
523434 ENSMUST00000202655 Mrpl33-209 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1063019 39

CTG...

LSS...

CTG Intronic
sORF
Neutrophil, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1061705 ENSMUST00000201620 Mrpl33-203 retained_intron Ribo-seq
weak 2 sORFs_org_Mouse
62451 168

CTG...

LVK...

CTG Alternative
InCDS
NMD
Overlapping
sORF
Intronic
ncRNA
MEF, BMDC, Liver,
Neutrophil, NSC, Brain,
Testis, B_cell, C2C12
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

977401 ENSMUST00000201910 Mrpl33-205 nonsense_mediated_decay Ribo-seq
1 sORFs_org_Mouse
1061705 ENSMUST00000201620 Mrpl33-203 retained_intron Ribo-seq
4 sORFs_org_Mouse
62059 ENSMUST00000202243 Mrpl33-208 processed_transcript Ribo-seq
2 sORFs_org_Mouse
517423 ENSMUST00000200694 Gm43809-201 processed_transcript Ribo-seq
1 sORFs_org_Mouse
171964 ENSMUST00000201483 Mrpl33-202 processed_transcript Ribo-seq
1 sORFs_org_Mouse
520838 33

GTG...

VDH...

GTG ncRNA
sORF
Alternative
Overlapping
Upstream
B_cell, Liver, MEF,
v6-5, 3T3, BMDC,
Neutrophil, NSC, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

167237 ENSMUST00000202033 Gm43809-202 processed_transcript Ribo-seq
2 sORFs_org_Mouse
1085210 ENSMUST00000031024 Mrpl33-201 protein_coding Ribo-seq
3 sORFs_org_Mouse
523434 ENSMUST00000202655 Mrpl33-209 processed_transcript Ribo-seq
1 sORFs_org_Mouse
559517 ENSMUST00000201999 Mrpl33-207 processed_transcript Ribo-seq
2 sORFs_org_Mouse
517423 ENSMUST00000200694 Gm43809-201 processed_transcript Ribo-seq
3 sORFs_org_Mouse
64476 156

GTG...

VSQ...

GTG ncRNA
sORF
Intronic
E14, Liver, Neutrophil,
Brain, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

523434 ENSMUST00000202655 Mrpl33-209 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1061705 ENSMUST00000201620 Mrpl33-203 retained_intron Ribo-seq
2 sORFs_org_Mouse
62059 ENSMUST00000202243 Mrpl33-208 processed_transcript Ribo-seq
2 sORFs_org_Mouse
66574 42

CTG...

LSL...

CTG ncRNA
sORF
Brain, E14, Liver,
MEF, Neutrophil, NSC,
R1E, Spleen_B_cell, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

62059 ENSMUST00000202243 Mrpl33-208 processed_transcript Ribo-seq
13 sORFs_org_Mouse
1435107 33

CTG...

LLS...

CTG ncRNA
sORF
Liver
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

523434 ENSMUST00000202655 Mrpl33-209 processed_transcript Ribo-seq
1 sORFs_org_Mouse
66042 36

TTG...

LWN...

TTG Intronic
sORF
ncRNA
E14, MEF, NSC,
3T3, Brain, Liver,
Testis, Spleen_B_cell
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

1061705 ENSMUST00000201620 Mrpl33-203 retained_intron Ribo-seq
weak 5 sORFs_org_Mouse
559517 ENSMUST00000201999 Mrpl33-207 processed_transcript Ribo-seq
2 sORFs_org_Mouse
62059 ENSMUST00000202243 Mrpl33-208 processed_transcript Ribo-seq
2 sORFs_org_Mouse
517423 ENSMUST00000200694 Gm43809-201 processed_transcript Ribo-seq
1 sORFs_org_Mouse
188078 150

CTG...

LVK...

CTG ncRNA
sORF
B_cell, Brain, C2C12,
Liver, MEF, Neutrophil,
NSC, Spleen_B_cell, v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

171964 ENSMUST00000201483 Mrpl33-202 processed_transcript Ribo-seq
14 sORFs_org_Mouse
1234827 45

AAG...

KFS...

AAG ncRNA
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

523434 ENSMUST00000202655 Mrpl33-209 processed_transcript Ribo-seq
1 sORFs_org_Mouse
66625 111

GTG...

VKL...

GTG ncRNA
sORF
3T3, BMDC, Brain,
E14, Liver, MEF,
R1E, Spleen_B_cell, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

62059 ENSMUST00000202243 Mrpl33-208 processed_transcript Ribo-seq
10 sORFs_org_Mouse
1239554 96

CTG...

LSL...

CTG ncRNA
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

523434 ENSMUST00000202655 Mrpl33-209 processed_transcript Ribo-seq
1 sORFs_org_Mouse
66129 30

GTG...

VEQ...

GTG ncRNA
sORF
Intronic
B_cell, Spleen_B_cell, 3T3,
BMDC, E14, Liver,
MEF, Neutrophil, NSC,
Brain, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

517423 ENSMUST00000200694 Gm43809-201 processed_transcript Ribo-seq
2 sORFs_org_Mouse
559517 ENSMUST00000201999 Mrpl33-207 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1061705 ENSMUST00000201620 Mrpl33-203 retained_intron Ribo-seq
moderate 8 sORFs_org_Mouse
62059 ENSMUST00000202243 Mrpl33-208 processed_transcript Ribo-seq
2 sORFs_org_Mouse
171964 ENSMUST00000201483 Mrpl33-202 processed_transcript Ribo-seq
moderate 1 sORFs_org_Mouse
523433 36

GTG...

VDH...

GTG ncRNA
sORF
BMDC, Liver, MEF,
Neutrophil, NSC, Spleen_B_cell,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

523434 ENSMUST00000202655 Mrpl33-209 processed_transcript Ribo-seq
9 sORFs_org_Mouse
66685 108

CTG...

LSL...

CTG ncRNA
sORF
3T3, BMDC, Brain,
E14, Liver, MEF,
R1E, Spleen_B_cell, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

62059 ENSMUST00000202243 Mrpl33-208 processed_transcript Ribo-seq
11 sORFs_org_Mouse
67240 102

GTG...

VSQ...

GTG ncRNA
sORF
3T3, Brain, E14,
Liver, MEF, R1E,
Spleen_B_cell, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

62059 ENSMUST00000202243 Mrpl33-208 processed_transcript Ribo-seq
8 sORFs_org_Mouse
188648 147

GTG...

VKL...

GTG ncRNA
sORF
B_cell, BMDC, Brain,
E14, Liver, MEF,
Neutrophil, NSC, Spleen_B_cell,
v6-5
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

171964 ENSMUST00000201483 Mrpl33-202 processed_transcript Ribo-seq
14 sORFs_org_Mouse
1238115 147

CTG...

LSL...

CTG ncRNA
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

523434 ENSMUST00000202655 Mrpl33-209 processed_transcript Ribo-seq
1 sORFs_org_Mouse
903471 72

ATA...

IGK...

ATA ncRNA
sORF
BMDC
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

62059 ENSMUST00000202243 Mrpl33-208 processed_transcript Ribo-seq
1 sORFs_org_Mouse
67440 33

CTG...

LHY...

CTG ncRNA
sORF
Brain, E14, Liver,
Neutrophil, R1E, Testis
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

62059 ENSMUST00000202243 Mrpl33-208 processed_transcript Ribo-seq
8 sORFs_org_Mouse
1239809 87

CTG...

LHY...

CTG ncRNA
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

523434 ENSMUST00000202655 Mrpl33-209 processed_transcript Ribo-seq
1 sORFs_org_Mouse
1240668 63

AGG...

RFL...

AGG ncRNA
sORF
E14
MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

523434 ENSMUST00000202655 Mrpl33-209 processed_transcript Ribo-seq
1 sORFs_org_Mouse

Export data

Identification method

Predicted

Ribo-seq

MS

Start Codon

Kozak context

moderate

weak

strong

optimal

ORF length

Transcript biotype

antisense

antisense_RNA

bidirectional_promoter_lncRNA

IG_C_gene

lincRNA

non_stop_decay

nonsense_mediated_decay

polymorphic_pseudogene

processed_pseudogene

processed_transcript

protein_coding

pseudogene

retained_intron

sense_intronic

sense_overlapping

TEC

transcribed_processed_pseudogene

transcribed_unitary_pseudogene

transcribed_unprocessed_pseudogene

unprocessed_pseudogene

ORF Annotations

Reading frame

Alternative

Relative position

CDS

Downstream

InCDS

Intronic

NewCDS

Overlapping

Upstream

Biotype

Intergenic

ncRNA

NMD

NSD

Pseudogene

Length

sORF

Cell types

3T3

B_cell

BMDC

Brain

C2C12

E14

Glioma

Liver

MEF

MESC

Neutrophil

NSC

R1E

Skin_tumor

Spleen_B_cell

Testis

v6-5