Gene NCBI:53323 | MetamORF

Gene

ID CARD

NCBI:53323

Aliases

AW492011
D5Ertd601e, E2-25k, ENSMUSG00000029203
HIP-2, Hip2, Hypg
Lig, MGI:1858216, NCBI:53323
OFF:Ube2k, Ube2k

Chromosome

Transcripts

44 ORFs
10 known transcripts
137 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

828390

ENSMUST00000202572

Ube2k-208

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
64877	36	TTG ...	LGT ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	BMDC
831425	99	GTG ...	VIA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
830091	75	TTG ...	LQA ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, BMDC, MEF
178375	54	ATG ...	MLP ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
829372	63	GTG ...	VAL ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Intronic sORF	B_cell, BMDC, MEF
832308	57	TTG ...	LSS ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Intronic sORF	B_cell, BMDC, MEF
1685737	132	CTG ...	LSC ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	MEF
830087	96	CTG ...	LRT ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, BMDC, MEF
517929	66	CTG ...	LLA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, BMDC, MEF
62704	87	CTG ...	LKC ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	B_cell
1686012	120	CTG ...	LLF ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	MEF
832970	81	TTG ...	LSL ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, BMDC, MEF
1925	39	ATG ...	MGC ...	Ribo-seq	ATG	strong	3	sORFs_org_Mouse	Intronic sORF	B_cell, BMDC, MEF
170417	33	CTG ...	LQN ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Intronic sORF	B_cell
1686437	51	TTG ...	LET ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	MEF
828389	63	TTG ...	LAA ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Intronic sORF	B_cell, BMDC, MEF

167324

ENSMUST00000201984

Ube2k-206

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
65577	66	GTG ...	VRR ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Brain, E14, MEF
64079	93	GTG ...	VAG ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Brain
64901	105	GTG ...	VVV ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain
170417	33	CTG ...	LQN ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14
174858	42	TTG ...	LFG ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
64877	36	TTG ...	LGT ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, E14
64362	36	GTG ...	VAA ...	Ribo-seq	GTG	strong	4	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Brain, E14, MEF
902693	48	AAG ...	KRC ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
184803	42	CTG ...	LEH ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
175037	66	CTG ...	LRA ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, E14
189541	99	TTG ...	LFG ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, MEF
65823	120	GTG ...	VAA ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, E14
1239068	81	AAG ...	KIN ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
65927	150	CTG ...	LRE ...	Ribo-seq	CTG	weak	3	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, E14
65728	93	GTG ...	VAE ...	Ribo-seq	GTG	strong	4	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, E14
64838	168	GTG ...	VLG ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain
977417	42	ATA ...	ILV ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
65758	111	GTG ...	VAV ...	Ribo-seq	GTG	strong	4	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Brain, E14
1237963	42	ATC ...	IMG ...	Ribo-seq	ATC	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
62704	87	CTG ...	LKC ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
1240485	42	ATA ...	IHQ ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1925	39	ATG ...	MGC ...	Ribo-seq	ATG	strong	3	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
63896	96	TTG ...	LVA ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Brain
66067	42	GTG ...	VAV ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Brain, E14
1235020	75	ACG ...	TNQ ...	Ribo-seq	ACG	moderate	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	E14

62705

ENSMUST00000202082

Ube2k-207

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
67152	99	TTG ...	LFG ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Testis
65823	120	GTG ...	VAA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
1925	39	ATG ...	MGC ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse	InCDS Overlapping sORF	R1E, Testis
65728	93	GTG ...	VAE ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
65758	111	GTG ...	VAV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
64901	105	GTG ...	VVV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
64838	168	GTG ...	VLG ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
65927	150	CTG ...	LRE ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
62704	87	CTG ...	LKC ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	R1E, Testis
64877	36	TTG ...	LGT ...	Ribo-seq	TTG	strong	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E, Testis
1801094	30	CTG ...	LQK ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Downstream sORF	R1E
66067	42	GTG ...	VAV ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
65577	66	GTG ...	VRR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
64362	36	GTG ...	VAA ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
1801597	57	ATG ...	MML ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Downstream sORF	R1E

517035

ENSMUST00000202679

Ube2k-210

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1925	39	ATG ...	MGC ...	Ribo-seq	ATG	strong	6	sORFs_org_Mouse	InCDS Overlapping sORF	E14, Liver, MEF, Neutrophil, NSC, v6-5
175037	66	CTG ...	LRA ...	Ribo-seq	CTG	weak	7	sORFs_org_Mouse	Alternative sORF Upstream	E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
65728	93	GTG ...	VAE ...	Ribo-seq	GTG	strong	8	sORFs_org_Mouse	Alternative sORF Upstream	E14, Liver, MEF, Neutrophil, NSC, R1E, v6-5
65577	66	GTG ...	VRR ...	Ribo-seq	GTG	moderate	7	sORFs_org_Mouse	Alternative sORF Upstream	E14, MEF, Neutrophil, R1E, Spleen_B_cell, v6-5
65927	150	CTG ...	LRE ...	Ribo-seq	CTG	weak	7	sORFs_org_Mouse	Alternative sORF Upstream	E14, Liver, MEF, Neutrophil, R1E, v6-5
63896	96	TTG ...	LVA ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative sORF Upstream	MEF, Neutrophil, R1E, Spleen_B_cell, v6-5
66067	42	GTG ...	VAV ...	Ribo-seq	GTG	strong	7	sORFs_org_Mouse	Alternative sORF Upstream	E14, Liver, MEF, Neutrophil, R1E, v6-5
64079	93	GTG ...	VAG ...	Ribo-seq	GTG	moderate	6	sORFs_org_Mouse	Alternative sORF Upstream	MEF, Neutrophil, R1E, Spleen_B_cell, v6-5
170417	33	CTG ...	LQN ...	Ribo-seq	CTG	weak	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, R1E, v6-5
62704	87	CTG ...	LKC ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	InCDS Overlapping sORF	E14, Liver, MEF, NSC, v6-5
65823	120	GTG ...	VAA ...	Ribo-seq	GTG	strong	7	sORFs_org_Mouse	Alternative sORF Upstream	E14, Liver, MEF, Neutrophil, R1E, v6-5
184803	42	CTG ...	LEH ...	Ribo-seq	CTG	strong	3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, R1E
64901	105	GTG ...	VVV ...	Ribo-seq	GTG	strong	7	sORFs_org_Mouse	Alternative sORF Upstream	E14, Liver, MEF, Neutrophil, R1E, v6-5
64838	168	GTG ...	VLG ...	Ribo-seq	GTG	weak	6	sORFs_org_Mouse	Alternative sORF Upstream	E14, MEF, Neutrophil, R1E, v6-5
174858	42	TTG ...	LFG ...	Ribo-seq	TTG		5	sORFs_org_Mouse	Alternative sORF Upstream	E14, MEF, NSC, R1E, v6-5
65758	111	GTG ...	VAV ...	Ribo-seq	GTG	strong	7	sORFs_org_Mouse	Alternative sORF Upstream	E14, Liver, MEF, Neutrophil, R1E, v6-5
64877	36	TTG ...	LGT ...	Ribo-seq	TTG	strong	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, Liver, MEF, NSC, v6-5
64362	36	GTG ...	VAA ...	Ribo-seq	GTG	strong	7	sORFs_org_Mouse	Alternative sORF Upstream	E14, Liver, MEF, Neutrophil, R1E, v6-5
178375	54	ATG ...	MLP ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Downstream sORF	MEF, R1E
67152	99	TTG ...	LFG ...	Ribo-seq	TTG		6	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	E14, Liver, MEF, NSC, R1E, v6-5

1926

ENSMUST00000142407

Ube2k-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1801597	57	ATG ...	MML ...	Ribo-seq	ATG	weak	1	Johnstone2016	Downstream sORF	Glioma, Liver, MEF, MESC
64901	105	GTG ...	VVV ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC
64127	126	GTG ...	VVR ...	Ribo-seq	GTG	strong	4	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Brain, Spleen_B_cell, Testis
63681	123	GTG ...	VRM ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Spleen_B_cell, Testis
64877	36	TTG ...	LGT ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
189541	99	TTG ...	LFG ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, MEF
65823	120	GTG ...	VAA ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC
174858	42	TTG ...	LFG ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
64362	36	GTG ...	VAA ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Alternative sORF Upstream	3T3, BMDC, MEF
64079	93	GTG ...	VAG ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Alternative sORF Upstream	3T3, BMDC, MEF
175037	66	CTG ...	LRA ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF
64838	168	GTG ...	VLG ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC
178375	54	ATG ...	MLP ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Downstream sORF	Brain
65728	93	GTG ...	VAE ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC
62704	87	CTG ...	LKC ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
66067	42	GTG ...	VAV ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Alternative sORF Upstream	3T3, BMDC, MEF
63896	96	TTG ...	LVA ...	Ribo-seq	TTG	strong	3	sORFs_org_Mouse	Alternative sORF Upstream	3T3, BMDC, MEF
65758	111	GTG ...	VAV ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC
65927	150	CTG ...	LRE ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC
170417	33	CTG ...	LQN ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
1925	39	ATG ...	MGC ...	Ribo-seq	ATG	strong	4	sORFs_org_Mouse Johnstone2016	InCDS Overlapping sORF	3T3, Glioma, Liver, MEF, MESC, Skin_tumor
65577	66	GTG ...	VRR ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Alternative sORF Upstream	3T3, BMDC, MEF
62123	117	ATG ...	MRG ...	Ribo-seq	ATG	weak	6	sORFs_org_Mouse Johnstone2016	Alternative sORF Upstream	3T3, B_cell, E14, Glioma, Liver, MEF, MESC, Spleen_B_cell, Testis

516600

ENSMUST00000202601

Ube2k-209

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
65758	111	GTG ...	VAV ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative NMD Overlapping sORF Upstream	Spleen_B_cell
64838	168	GTG ...	VLG ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative NMD Overlapping sORF Upstream	Spleen_B_cell
517929	66	CTG ...	LLA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Downstream NMD sORF	Spleen_B_cell
65728	93	GTG ...	VAE ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Alternative NMD Overlapping sORF Upstream	Liver, Spleen_B_cell
829372	63	GTG ...	VAL ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Liver
832308	57	TTG ...	LSS ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Liver
65927	150	CTG ...	LRE ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative NMD Overlapping sORF Upstream	Spleen_B_cell
175037	66	CTG ...	LRA ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative NMD Overlapping sORF Upstream	Liver, Spleen_B_cell
65823	120	GTG ...	VAA ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative NMD Overlapping sORF Upstream	Spleen_B_cell
64901	105	GTG ...	VVV ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Alternative NMD Overlapping sORF Upstream	Liver, Spleen_B_cell
62704	87	CTG ...	LKC ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Downstream NMD sORF	Liver

829165

ENSMUST00000200946

Ube2k-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
65758	111	GTG ...	VAV ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	sORF	B_cell
64838	168	GTG ...	VLG ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	sORF	B_cell
65927	150	CTG ...	LRE ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	sORF	B_cell
65823	120	GTG ...	VAA ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	sORF	B_cell
64901	105	GTG ...	VVV ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	sORF	B_cell
65728	93	GTG ...	VAE ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	sORF	B_cell

63897

ENSMUST00000201292

Ube2k-204

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
65823	120	GTG ...	VAA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	MEF
63896	96	TTG ...	LVA ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
64901	105	GTG ...	VVV ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	MEF
65728	93	GTG ...	VAE ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative sORF Upstream	BMDC, MEF
66067	42	GTG ...	VAV ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative sORF Upstream	BMDC
65758	111	GTG ...	VAV ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative sORF Upstream	BMDC, MEF
64362	36	GTG ...	VAA ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative sORF Upstream	BMDC
64079	93	GTG ...	VAG ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
65577	66	GTG ...	VRR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	BMDC
64838	168	GTG ...	VLG ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative sORF Upstream	MEF
65927	150	CTG ...	LRE ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative sORF Upstream	BMDC, MEF
901548	48	ATA ...	IKI ...	Ribo-seq	ATA		1	sORFs_org_Mouse	sORF Upstream	BMDC
902693	48	AAG ...	KRC ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC

516753

ENSMUST00000201383

Ube2k-205

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
977417	42	ATA ...	ILV ...	Ribo-seq	ATA	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
174858	42	TTG ...	LFG ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Spleen_B_cell
189541	99	TTG ...	LFG ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, Liver, MEF, Spleen_B_cell

177189

ENSMUST00000201266

Ube2k-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1925	39	ATG ...	MGC ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
64127	126	GTG ...	VVR ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative sORF Upstream	MEF, Neutrophil
175037	66	CTG ...	LRA ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF
62123	117	ATG ...	MRG ...	Ribo-seq	ATG	weak	5	sORFs_org_Mouse	Alternative sORF Upstream	Brain, MEF, Neutrophil, v6-5
63681	123	GTG ...	VRM ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Alternative sORF Upstream	MEF, Neutrophil

901328

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
62123	117	ATG ...	MRG ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

44 ORFs
10 known transcripts
137 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

64877

TTG...

LGT...

TTG

Intronic
sORF
Alternative
InCDS
Overlapping

BMDC, MEF, Brain,
E14, R1E, Testis,
Liver, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
828390	ENSMUST00000202572	Ube2k-208	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
62705	ENSMUST00000202082	Ube2k-207	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	strong	5	sORFs_org_Mouse

65577

GTG...

VRR...

GTG

Alternative
sORF
Upstream

B_cell, Brain, E14,
MEF, Neutrophil, R1E,
Spleen_B_cell, v6-5, BMDC,
Testis, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	moderate	7	sORFs_org_Mouse
63897	ENSMUST00000201292	Ube2k-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
62705	ENSMUST00000202082	Ube2k-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

67152

TTG...

LFG...

TTG

Alternative
Overlapping
sORF
Upstream

Testis, E14, Liver,
MEF, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62705	ENSMUST00000202082	Ube2k-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq		6	sORFs_org_Mouse

64079

GTG...

VAG...

GTG

Alternative
sORF
Upstream

B_cell, Brain, MEF,
Neutrophil, R1E, Spleen_B_cell,
v6-5, 3T3, BMDC,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
63897	ENSMUST00000201292	Ube2k-204	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

831425

GTG...

VIA...

GTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
828390	ENSMUST00000202572	Ube2k-208	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1925

ATG...

MGC...

ATG

InCDS
Overlapping
sORF
Intronic

E14, Liver, MEF,
Neutrophil, NSC, v6-5,
R1E, Testis, B_cell,
BMDC, Brain, 3T3,
Glioma, MESC, Skin_tumor

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	strong	6	sORFs_org_Mouse
62705	ENSMUST00000202082	Ube2k-207	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
177189	ENSMUST00000201266	Ube2k-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
828390	ENSMUST00000202572	Ube2k-208	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse Johnstone2016

1801597

ATG...

MML...

ATG

Downstream
sORF

Glioma, Liver, MEF,
MESC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	weak	1	Johnstone2016
62705	ENSMUST00000202082	Ube2k-207	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

65758

111

GTG...

VAV...

GTG

Alternative
NMD
Overlapping
sORF
Upstream

Spleen_B_cell, B_cell, Testis,
BMDC, MEF, E14,
Liver, Neutrophil, R1E,
v6-5, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516600	ENSMUST00000202601	Ube2k-209	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
829165	ENSMUST00000200946	Ube2k-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
62705	ENSMUST00000202082	Ube2k-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
63897	ENSMUST00000201292	Ube2k-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	strong	7	sORFs_org_Mouse
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse

64901

105

GTG...

VVV...

GTG

Alternative
Overlapping
sORF
Upstream
NMD

BMDC, Brain, MEF,
Testis, E14, Liver,
Neutrophil, R1E, v6-5,
Spleen_B_cell, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
63897	ENSMUST00000201292	Ube2k-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
62705	ENSMUST00000202082	Ube2k-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	strong	7	sORFs_org_Mouse
516600	ENSMUST00000202601	Ube2k-209	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse
829165	ENSMUST00000200946	Ube2k-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

175037

CTG...

LRA...

CTG

Alternative
sORF
Upstream
Overlapping
NMD

E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5, Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	weak	7	sORFs_org_Mouse
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
177189	ENSMUST00000201266	Ube2k-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
516600	ENSMUST00000202601	Ube2k-209	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse

65823

120

GTG...

VAA...

GTG

Alternative
sORF
Upstream
Overlapping
NMD

MEF, Testis, BMDC,
B_cell, E14, Liver,
Neutrophil, R1E, v6-5,
Brain, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
63897	ENSMUST00000201292	Ube2k-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
62705	ENSMUST00000202082	Ube2k-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
829165	ENSMUST00000200946	Ube2k-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	strong	7	sORFs_org_Mouse
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
516600	ENSMUST00000202601	Ube2k-209	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

63896

TTG...

LVA...

TTG

Alternative
sORF
Upstream

Testis, MEF, Neutrophil,
R1E, Spleen_B_cell, v6-5,
3T3, BMDC, B_cell,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
63897	ENSMUST00000201292	Ube2k-204	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq		6	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse

65728

GTG...

VAE...

GTG

Alternative
sORF
Upstream
NMD
Overlapping

E14, Liver, MEF,
Neutrophil, NSC, R1E,
v6-5, BMDC, Testis,
Spleen_B_cell, Brain, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	strong	8	sORFs_org_Mouse
63897	ENSMUST00000201292	Ube2k-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse
62705	ENSMUST00000202082	Ube2k-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
516600	ENSMUST00000202601	Ube2k-209	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse
829165	ENSMUST00000200946	Ube2k-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

64127

126

GTG...

VVR...

GTG

Alternative
sORF
Upstream

B_cell, Brain, Spleen_B_cell,
Testis, MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse
177189	ENSMUST00000201266	Ube2k-203	protein_coding	Ribo-seq		3	sORFs_org_Mouse

63681

123

GTG...

VRM...

GTG

Alternative
sORF
Upstream

B_cell, Spleen_B_cell, Testis,
MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse
177189	ENSMUST00000201266	Ube2k-203	protein_coding	Ribo-seq	moderate	3	sORFs_org_Mouse

977417

ATA...

ILV...

ATA

Alternative
InCDS
Overlapping
sORF

MEF, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516753	ENSMUST00000201383	Ube2k-205	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

65927

150

CTG...

LRE...

CTG

Alternative
sORF
Upstream
NMD
Overlapping

E14, Liver, MEF,
Neutrophil, R1E, v6-5,
Testis, B_cell, Spleen_B_cell,
Brain, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	weak	7	sORFs_org_Mouse
62705	ENSMUST00000202082	Ube2k-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
829165	ENSMUST00000200946	Ube2k-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
516600	ENSMUST00000202601	Ube2k-209	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
63897	ENSMUST00000201292	Ube2k-204	protein_coding	Ribo-seq		2	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

64838

168

GTG...

VLG...

GTG

Alternative
NMD
Overlapping
sORF
Upstream

Spleen_B_cell, B_cell, Testis,
BMDC, MEF, Brain,
E14, Neutrophil, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516600	ENSMUST00000202601	Ube2k-209	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
829165	ENSMUST00000200946	Ube2k-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
62705	ENSMUST00000202082	Ube2k-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
63897	ENSMUST00000201292	Ube2k-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	weak	6	sORFs_org_Mouse

830091

TTG...

LQA...

TTG

Intronic
sORF

B_cell, BMDC, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
828390	ENSMUST00000202572	Ube2k-208	retained_intron	Ribo-seq		3	sORFs_org_Mouse

178375

ATG...

MLP...

ATG

Intronic
sORF
Downstream

MEF, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
828390	ENSMUST00000202572	Ube2k-208	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

189541

TTG...

LFG...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, MEF,
Brain, B_cell, Liver,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq		4	sORFs_org_Mouse
516753	ENSMUST00000201383	Ube2k-205	protein_coding	Ribo-seq		4	sORFs_org_Mouse

517929

CTG...

LLA...

CTG

Downstream
NMD
sORF
Intronic

Spleen_B_cell, B_cell, BMDC,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
516600	ENSMUST00000202601	Ube2k-209	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
828390	ENSMUST00000202572	Ube2k-208	retained_intron	Ribo-seq		3	sORFs_org_Mouse

170417

CTG...

LQN...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

Brain, E14, MEF,
R1E, v6-5, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	weak	3	sORFs_org_Mouse
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse
828390	ENSMUST00000202572	Ube2k-208	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

174858

TTG...

LFG...

TTG

Alternative
InCDS
Overlapping
sORF
Upstream

Brain, MEF, Spleen_B_cell,
E14, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
516753	ENSMUST00000201383	Ube2k-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq		5	sORFs_org_Mouse

66067

GTG...

VAV...

GTG

Alternative
sORF
Upstream

BMDC, E14, Liver,
MEF, Neutrophil, R1E,
v6-5, 3T3, Testis,
B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
63897	ENSMUST00000201292	Ube2k-204	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	strong	7	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
62705	ENSMUST00000202082	Ube2k-207	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse

64362

GTG...

VAA...

GTG

Alternative
sORF
Upstream

B_cell, Brain, E14,
MEF, 3T3, BMDC,
Testis, Liver, Neutrophil,
R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
63897	ENSMUST00000201292	Ube2k-204	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
62705	ENSMUST00000202082	Ube2k-207	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	strong	7	sORFs_org_Mouse

829372

GTG...

VAL...

GTG

Intronic
sORF
Alternative
Downstream
NMD

B_cell, BMDC, MEF,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
828390	ENSMUST00000202572	Ube2k-208	retained_intron	Ribo-seq	strong	3	sORFs_org_Mouse
516600	ENSMUST00000202601	Ube2k-209	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

902693

AAG...

KRC...

AAG

Alternative
InCDS
Overlapping
sORF

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
63897	ENSMUST00000201292	Ube2k-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

184803

CTG...

LEH...

CTG

InCDS
Overlapping
sORF

Brain, E14, MEF,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse

832308

TTG...

LSS...

TTG

Intronic
sORF
Alternative
Downstream
NMD

B_cell, BMDC, MEF,
Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
828390	ENSMUST00000202572	Ube2k-208	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
516600	ENSMUST00000202601	Ube2k-209	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

1685737

132

CTG...

LSC...

CTG

Intronic
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
828390	ENSMUST00000202572	Ube2k-208	retained_intron	Ribo-seq		1	sORFs_org_Mouse

62704

CTG...

LKC...

CTG

InCDS
Overlapping
sORF
Intronic
Downstream
NMD

R1E, Testis, E14,
Liver, MEF, NSC,
v6-5, B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62705	ENSMUST00000202082	Ube2k-207	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
517035	ENSMUST00000202679	Ube2k-210	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
828390	ENSMUST00000202572	Ube2k-208	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
516600	ENSMUST00000202601	Ube2k-209	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

830087

CTG...

LRT...

CTG

Intronic
sORF

B_cell, BMDC, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
828390	ENSMUST00000202572	Ube2k-208	retained_intron	Ribo-seq		3	sORFs_org_Mouse

1239068

AAG...

KIN...

AAG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1801094

CTG...

LQK...

CTG

Downstream
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62705	ENSMUST00000202082	Ube2k-207	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1686012

120

CTG...

LLF...

CTG

Intronic
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
828390	ENSMUST00000202572	Ube2k-208	retained_intron	Ribo-seq		1	sORFs_org_Mouse

62123

117

ATG...

MRG...

ATG

sORF
Alternative
Upstream

Brain, MEF,
Neutrophil, v6-5, 3T3,
B_cell, E14, Glioma,
Liver, MESC, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
901328	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017
177189	ENSMUST00000201266	Ube2k-203	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse
1926	ENSMUST00000142407	Ube2k-201	protein_coding	Ribo-seq	weak	6	sORFs_org_Mouse Johnstone2016

832970

TTG...

LSL...

TTG

Intronic
sORF

B_cell, BMDC, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
828390	ENSMUST00000202572	Ube2k-208	retained_intron	Ribo-seq		3	sORFs_org_Mouse

901548

ATA...

IKI...

ATA

sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
63897	ENSMUST00000201292	Ube2k-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1237963

ATC...

IMG...

ATC

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1240485

ATA...

IHQ...

ATA

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1686437

TTG...

LET...

TTG

Intronic
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
828390	ENSMUST00000202572	Ube2k-208	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

828389

TTG...

LAA...

TTG

Intronic
sORF

B_cell, BMDC, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
828390	ENSMUST00000202572	Ube2k-208	retained_intron	Ribo-seq		3	sORFs_org_Mouse

1235020

ACG...

TNQ...

ACG

Alternative
Overlapping
sORF
Upstream

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
167324	ENSMUST00000201984	Ube2k-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

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