Gene NCBI:51886 | MetamORF

Gene

ID CARD

NCBI:51886

Aliases

9530027K12Rik
D3Ertd330e, ENSMUSG00000028034, FBP
Fubp, Fubp1, Fubp4
MGI:1196294, NCBI:51886, OFF:Fubp1

Chromosome

Transcripts

108 ORFs
17 known transcripts
270 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

127254

ENSMUST00000106121

Fubp1-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
544252	72	CTG ...	LVL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
537938	114	GTG ...	VVS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
135764	42	GTG ...	VVS ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
141136	33	ATG ...	MDL ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, R1E
747568	69	ATG ...	MGL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
540165	72	TTG ...	LKR ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
536145	45	ATG ...	MGK ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
750391	54	CTG ...	LVL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
143346	123	CTG ...	LEH ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, R1E
144167	81	TTG ...	LGR ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
747793	129	CTG ...	LGP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
544112	87	ATG ...	MGL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
136376	39	CTG ...	LEY ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
748932	138	CTG ...	LLL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
129808	51	GTG ...	VIK ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
537009	75	TTG ...	LLK ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
750018	96	GTG ...	VQP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
129965	63	TTG ...	LAE ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
542307	66	CTG ...	LIN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
141434	138	GTG ...	VFR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
540277	51	GTG ...	VDS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
542831	45	TTG ...	LEH ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
747870	132	CTG ...	LLG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
131229	117	GTG ...	VDR ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
53987	84	CTG ...	LST ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
750403	66	GTG ...	VSA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
748309	39	ATG ...	MVM ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
130045	36	GTG ...	VMD ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, R1E
129443	120	CTG ...	LVD ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
134957	105	CTG ...	LVV ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E
540403	51	CTG ...	LAF ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
747455	51	GTG ...	VLI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
536707	102	GTG ...	VVE ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
543748	69	GTG ...	VLI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
542811	108	CTG ...	LSN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
127253	51	GTG ...	VNR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
144505	114	CTG ...	LNL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, R1E
751585	48	CTG ...	LIN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	R1E
138237	129	CTG ...	LAI ...	Ribo-seq	CTG	strong	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain, R1E

543321

ENSMUST00000198227

Fubp1-209

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
129808	51	GTG ...	VIK ...	Ribo-seq	GTG	weak	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, Neutrophil, v6-5
543320	192	CTG ...	LDL ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Downstream Overlapping sORF	3T3, B_cell, E14, MEF
750391	54	CTG ...	LVL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC, v6-5
130045	36	GTG ...	VMD ...	Ribo-seq	GTG	moderate	5	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, Neutrophil, NSC, v6-5
820991	201	ATG ...	MGL ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Downstream Overlapping sORF	B_cell, E14, MEF
747455	51	GTG ...	VLI ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC, v6-5
747568	69	ATG ...	MGL ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC, v6-5
540277	51	GTG ...	VDS ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, v6-5
1223424	174	AGG ...	RSS ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
748309	39	ATG ...	MVM ...	Ribo-seq	ATG	strong	4	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, NSC, v6-5
820938	219	ATG ...	MGF ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Downstream Overlapping sORF	B_cell, E14, MEF
542307	66	CTG ...	LIN ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC, v6-5
1553208	126	CTG ...	LAQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Downstream Overlapping sORF	Brain
131229	117	GTG ...	VDR ...	Ribo-seq	GTG	moderate	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, Neutrophil, NSC, v6-5
135764	42	GTG ...	VVS ...	Ribo-seq	GTG	strong	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil, v6-5
1221868	51	AGG ...	RSR ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
141434	138	GTG ...	VFR ...	Ribo-seq	GTG		6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, Neutrophil, NSC, v6-5
543748	69	GTG ...	VLI ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC, v6-5
540403	51	CTG ...	LAF ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, NSC, v6-5
820726	228	ATG ...	MGP ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Downstream Overlapping sORF	B_cell, E14, MEF
542811	108	CTG ...	LSN ...	Ribo-seq	CTG		5	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, NSC, v6-5
893280	66	AGG ...	RED ...	Ribo-seq	AGG	strong	1	sORFs_org_Mouse	InCDS Overlapping sORF	BMDC
536145	45	ATG ...	MGK ...	Ribo-seq	ATG	strong	3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, NSC
820722	237	CTG ...	LYP ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Downstream Overlapping sORF	B_cell, E14, MEF
543577	114	CTG ...	LAR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	NSC, v6-5
542831	45	TTG ...	LEH ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, NSC
1222779	42	AGG ...	RSL ...	Ribo-seq	AGG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
751585	48	CTG ...	LIN ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Neutrophil, v6-5
544112	87	ATG ...	MGL ...	Ribo-seq	ATG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC, v6-5
141136	33	ATG ...	MDL ...	Ribo-seq	ATG	strong	5	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, Neutrophil, NSC, v6-5
1221024	57	AAG ...	KHK ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
972508	138	ACG ...	TAA ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC
893894	30	AAG ...	KCG ...	Ribo-seq	AAG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
1221019	66	ATA ...	IWG ...	Ribo-seq	ATA	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
537009	75	TTG ...	LLK ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, NSC, v6-5
544252	72	CTG ...	LVL ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC, v6-5
896098	174	ACG ...	TAA ...	Ribo-seq	ACG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	BMDC
542145	105	CTG ...	LAA ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC, v6-5
144505	114	CTG ...	LNL ...	Ribo-seq	CTG		5	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, NSC, v6-5
1221530	81	AGG ...	RTS ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
540165	72	TTG ...	LKR ...	Ribo-seq	TTG	weak	5	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, Neutrophil, NSC, v6-5
1219265	33	ATT ...	ISL ...	Ribo-seq	ATT	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
750403	66	GTG ...	VSA ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, v6-5
1224395	150	CTG ...	LHL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Downstream Overlapping sORF	Brain, E14
134957	105	CTG ...	LVV ...	Ribo-seq	CTG	strong	5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, NSC, v6-5
129443	120	CTG ...	LVD ...	Ribo-seq	CTG	strong	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, NSC, v6-5
1224282	138	ATC ...	IQD ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Downstream Overlapping sORF	E14
143346	123	CTG ...	LEH ...	Ribo-seq	CTG		5	sORFs_org_Mouse	InCDS Overlapping sORF	E14, MEF, NSC, v6-5
1222585	165	CTG ...	LYP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
138237	129	CTG ...	LAI ...	Ribo-seq	CTG	strong	6	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF, Neutrophil, NSC, v6-5
536707	102	GTG ...	VVE ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, Neutrophil, v6-5
1217971	33	AAG ...	KNR ...	Ribo-seq	AAG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
543673	60	TTG ...	LER ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	MEF, v6-5

535641

ENSMUST00000199876

Fubp1-215

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
53987	84	CTG ...	LST ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3, E14, NSC, v6-5
540403	51	CTG ...	LAF ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
540277	51	GTG ...	VDS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
136376	39	CTG ...	LEY ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
748932	138	CTG ...	LLL ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3, E14, NSC, v6-5
535640	102	TTG ...	LGC ...	Ribo-seq	TTG	strong	5	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3, E14, MEF, NSC, v6-5
540199	30	GTG ...	VAY ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
536707	102	GTG ...	VVE ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
750403	66	GTG ...	VSA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
751585	48	CTG ...	LIN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
750018	96	GTG ...	VQP ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3, E14, NSC, v6-5
539759	138	CTG ...	LQR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
747793	129	CTG ...	LGP ...	Ribo-seq	CTG	moderate	4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3, E14, NSC, v6-5
54385	54	ATG ...	MPR ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14, NSC
750391	54	CTG ...	LVL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
536145	45	ATG ...	MGK ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
820305	162	CTG ...	LLI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
747568	69	ATG ...	MGL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
129808	51	GTG ...	VIK ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
752559	33	GTG ...	VVA ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
537009	75	TTG ...	LLK ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
131229	117	GTG ...	VDR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
747350	150	TTG ...	LFL ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3, E14, MEF, NSC
502857	36	ATG ...	MTM ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
506198	69	CTG ...	LAA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
506774	30	ATG ...	MVM ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
537541	39	TTG ...	LQQ ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
53189	66	TTG ...	LNS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
752427	177	TTG ...	LDQ ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
1374547	198	GTG ...	VRF ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
127253	51	GTG ...	VNR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
504749	78	CTG ...	LAR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
820232	153	ATG ...	MLT ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	E14
747455	51	GTG ...	VLI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
138237	129	CTG ...	LAI ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
537938	114	GTG ...	VVS ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3, E14, NSC, v6-5
750693	111	TTG ...	LLT ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
135764	42	GTG ...	VVS ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
130045	36	GTG ...	VMD ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
1506193	60	TTG ...	LFV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	NSC
748309	39	ATG ...	MVM ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
141136	33	ATG ...	MDL ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
540165	72	TTG ...	LKR ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
751448	156	CTG ...	LKV ...	Ribo-seq	CTG		4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3, E14, NSC, v6-5
129965	63	TTG ...	LAE ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	3T3
134957	105	CTG ...	LVV ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
747870	132	CTG ...	LLG ...	Ribo-seq	CTG	weak	4	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3, E14, NSC, v6-5
129443	120	CTG ...	LVD ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3

1551227

ENSMUST00000196695

Fubp1-205

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
537938	114	GTG ...	VVS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
748932	138	CTG ...	LLL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
540277	51	GTG ...	VDS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
502857	36	ATG ...	MTM ...	Ribo-seq	ATG	weak	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
748309	39	ATG ...	MVM ...	Ribo-seq	ATG	strong	1	Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
504749	78	CTG ...	LAR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
750018	96	GTG ...	VQP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
747793	129	CTG ...	LGP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
750403	66	GTG ...	VSA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
535640	102	TTG ...	LGC ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
747870	132	CTG ...	LLG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
544112	87	ATG ...	MGL ...	Ribo-seq	ATG		1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
536145	45	ATG ...	MGK ...	Ribo-seq	ATG	strong	1	Johnstone2016	InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
506198	69	CTG ...	LAA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
816950	93	ATG ...	MLP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain

544059

ENSMUST00000196739

Fubp1-206

protein_coding

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

508203

135

TTG ...

LGC ...

Ribo-seq

TTG

sORFs_org_Mouse

3T3

816748

ENSMUST00000199918

Fubp1-216

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
748932	138	CTG ...	LLL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	B_cell
818459	72	ATG ...	MRI ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	B_cell
747793	129	CTG ...	LGP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	B_cell
747870	132	CTG ...	LLG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	B_cell
53987	84	CTG ...	LST ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	B_cell
508203	135	TTG ...	LGC ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	B_cell, Brain
144167	81	TTG ...	LGR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	B_cell
750018	96	GTG ...	VQP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	B_cell
536145	45	ATG ...	MGK ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	sORF	B_cell
537938	114	GTG ...	VVS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	B_cell
816950	93	ATG ...	MLP ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	B_cell

502858

ENSMUST00000200524

Fubp1-220

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1221136	147	AAG ...	KQF ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1222347	183	ATC ...	IQT ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
892983	66	AAG ...	KQR ...	Ribo-seq	AAG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
143346	123	CTG ...	LEH ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
1224347	72	ATA ...	ILQ ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
53987	84	CTG ...	LST ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1220685	126	AGG ...	RSR ...	Ribo-seq	AGG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1220823	126	ATC ...	ISR ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
506774	30	ATG ...	MVM ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
750018	96	GTG ...	VQP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
129808	51	GTG ...	VIK ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
748932	138	CTG ...	LLL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
747793	129	CTG ...	LGP ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
144167	81	TTG ...	LGR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1219796	120	AGG ...	RLQ ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
820232	153	ATG ...	MLT ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1219905	195	AGG ...	RQE ...	Ribo-seq	AGG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
972740	102	ATT ...	IIV ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
504749	78	CTG ...	LAR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
502857	36	ATG ...	MTM ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
1220805	75	ATA ...	IDS ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
506198	69	CTG ...	LAA ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell

53190

ENSMUST00000196062

Fubp1-203

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
502857	36	ATG ...	MTM ...	Ribo-seq	ATG	weak	5	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, E14, MEF, NSC, v6-5
537541	39	TTG ...	LQQ ...	Ribo-seq	TTG	moderate	5	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, MEF, NSC, R1E, v6-5
1374815	63	TTG ...	LQI ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14
1172278	48	ATG ...	MLR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14, v6-5
53189	66	TTG ...	LNS ...	Ribo-seq	TTG	weak	9	sORFs_org_Mouse	CDS NMD sORF	B_cell, E14, MEF, Neutrophil, NSC, R1E, Testis, v6-5
540199	30	GTG ...	VAY ...	Ribo-seq	GTG	strong	6	sORFs_org_Mouse	Downstream NMD sORF	B_cell, E14, MEF, NSC, R1E, v6-5
506774	30	ATG ...	MVM ...	Ribo-seq	ATG	strong	5	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, E14, MEF, NSC, v6-5
129965	63	TTG ...	LAE ...	Ribo-seq	TTG	moderate	8	sORFs_org_Mouse	Downstream NMD sORF	B_cell, E14, MEF, Neutrophil, NSC, R1E, v6-5
504749	78	CTG ...	LAR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, E14
127253	51	GTG ...	VNR ...	Ribo-seq	GTG	moderate	8	sORFs_org_Mouse	Downstream NMD sORF	B_cell, E14, MEF, Neutrophil, NSC, R1E, v6-5
506198	69	CTG ...	LAA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, E14, v6-5
752559	33	GTG ...	VVA ...	Ribo-seq	GTG	strong	6	sORFs_org_Mouse	Downstream NMD sORF	B_cell, E14, MEF, NSC, R1E, v6-5

816822

ENSMUST00000200452

Fubp1-219

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
138237	129	CTG ...	LAI ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell
752427	177	TTG ...	LDQ ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, Brain
129808	51	GTG ...	VIK ...	Ribo-seq	GTG	weak	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, MEF
751585	48	CTG ...	LIN ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell
129443	120	CTG ...	LVD ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell
131229	117	GTG ...	VDR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell
1682608	51	GTG ...	VPT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	MEF
820240	66	TTG ...	LFS ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, MEF
134957	105	CTG ...	LVV ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell
816821	87	GTG ...	VRN ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	B_cell
135764	42	GTG ...	VVS ...	Ribo-seq	GTG	strong	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, MEF
747455	51	GTG ...	VLI ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell
750391	54	CTG ...	LVL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell
747568	69	ATG ...	MGL ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell
540277	51	GTG ...	VDS ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF
540199	30	GTG ...	VAY ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	MEF
817266	138	ATG ...	MLR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	B_cell
537009	75	TTG ...	LLK ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	B_cell
750693	111	TTG ...	LLT ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	B_cell
129965	63	TTG ...	LAE ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	MEF
817929	54	ATG ...	MML ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	B_cell
750403	66	GTG ...	VSA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell
539759	138	CTG ...	LQR ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS NMD Overlapping sORF	Brain, Liver, MEF
540165	72	TTG ...	LKR ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	B_cell
1683644	30	TTG ...	LLN ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Downstream NMD sORF	MEF
536707	102	GTG ...	VVE ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	B_cell, MEF
752559	33	GTG ...	VVA ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	InCDS NMD Overlapping sORF	MEF

52288

ENSMUST00000166984

Fubp1-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
53140	57	ATG ...	MVV ...	Ribo-seq	ATG	strong	4	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Brain, Spleen_B_cell, Testis
134957	105	CTG ...	LVV ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
135764	42	GTG ...	VVS ...	Ribo-seq	GTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
144167	81	TTG ...	LGR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
544252	72	CTG ...	LVL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell
127253	51	GTG ...	VNR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
542811	108	CTG ...	LSN ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell
138237	129	CTG ...	LAI ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
543673	60	TTG ...	LER ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, MEF
52287	51	GTG ...	VQE ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative sORF Upstream	Spleen_B_cell, Testis
540277	51	GTG ...	VDS ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell, MEF
131229	117	GTG ...	VDR ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
129965	63	TTG ...	LAE ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
542831	45	TTG ...	LEH ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell
129808	51	GTG ...	VIK ...	Ribo-seq	GTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
129443	120	CTG ...	LVD ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
141434	138	GTG ...	VFR ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, MEF
543748	69	GTG ...	VLI ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell
544112	87	ATG ...	MGL ...	Ribo-seq	ATG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, MEF
543577	114	CTG ...	LAR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell
536707	102	GTG ...	VVE ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
143346	123	CTG ...	LEH ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell, MEF
542145	105	CTG ...	LAA ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell
542307	66	CTG ...	LIN ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell
144505	114	CTG ...	LNL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, B_cell

53988

ENSMUST00000200056

Fubp1-217

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
972740	102	ATT ...	IIV ...	Ribo-seq	ATT		1	sORFs_org_Mouse	sORF	BMDC
895515	123	ATT ...	IIV ...	Ribo-seq	ATT		1	sORFs_org_Mouse	sORF	BMDC
508203	135	TTG ...	LGC ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	MEF, R1E
895885	87	AAG ...	KQR ...	Ribo-seq	AAG		1	sORFs_org_Mouse	sORF	BMDC
54385	54	ATG ...	MPR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	Testis
893085	132	AGG ...	RHN ...	Ribo-seq	AGG		1	sORFs_org_Mouse	sORF	BMDC
892983	66	AAG ...	KQR ...	Ribo-seq	AAG		1	sORFs_org_Mouse	sORF	BMDC
53987	84	CTG ...	LST ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	Testis

819294

ENSMUST00000197141

Fubp1-207

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
820232	153	ATG ...	MLT ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	B_cell
820305	162	CTG ...	LLI ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
535640	102	TTG ...	LGC ...	Ribo-seq	TTG	strong	1	sORFs_org_Mouse	Intronic sORF	B_cell
747350	150	TTG ...	LFL ...	Ribo-seq	TTG	weak	1	sORFs_org_Mouse	Intronic sORF	B_cell

1219396

ENSMUST00000199202

Fubp1-214

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
972508	138	ACG ...	TAA ...	Ribo-seq	ACG		1	sORFs_org_Mouse	sORF	E14

1463887

ENSMUST00000199199

Fubp1-213

retained_intron

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

ORF annotations

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

127253

GTG ...

VNR ...

Ribo-seq

GTG

moderate

sORFs_org_Mouse

BMDC

1463349

ENSMUST00000200207

Fubp1-218

retained_intron

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

ORF annotations

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

54385

ATG ...

MPR ...

Ribo-seq

ATG

sORFs_org_Mouse

BMDC

508204

ENSMUST00000198405

Fubp1-210

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
508203	135	TTG ...	LGC ...	Ribo-seq	TTG		3	sORFs_org_Mouse	sORF	E14, NSC, Spleen_B_cell

819959

ENSMUST00000199127

Fubp1-212

retained_intron

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

ORF annotations

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

539759

138

CTG ...

LQR ...

Ribo-seq

CTG

sORFs_org_Mouse

B_cell, R1E

ORFs

108 ORFs
17 known transcripts
270 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

544252

CTG...

LVL...

CTG

Alternative
InCDS
Overlapping
sORF

R1E, 3T3, B_cell,
E14, MEF, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		5	sORFs_org_Mouse

129808

GTG...

VIK...

GTG

Alternative
InCDS
Overlapping
sORF
NMD

E14, MEF, Neutrophil,
v6-5, B_cell, Brain,
R1E, Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	weak	4	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	weak	2	sORFs_org_Mouse
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

53987

CTG...

LST...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

3T3, E14, NSC,
v6-5, B_cell, R1E,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	moderate	4	sORFs_org_Mouse
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse
816748	ENSMUST00000199918	Fubp1-216	protein_coding	Ribo-seq		1	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
53988	ENSMUST00000200056	Fubp1-217	protein_coding	Ribo-seq		1	sORFs_org_Mouse

543320

192

CTG...

LDL...

CTG

Downstream
Overlapping
sORF

3T3, B_cell, E14,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		5	sORFs_org_Mouse

537938

114

GTG...

VVS...

GTG

Alternative
InCDS
Overlapping
sORF
NMD

R1E, Brain, 3T3,
E14, NSC, v6-5,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1551227	ENSMUST00000196695	Fubp1-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	moderate	4	sORFs_org_Mouse
816748	ENSMUST00000199918	Fubp1-216	protein_coding	Ribo-seq		1	sORFs_org_Mouse

750391

CTG...

LVL...

CTG

Alternative
InCDS
Overlapping
sORF
NMD

MEF, NSC, v6-5,
R1E, 3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		3	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

540403

CTG...

LAF...

CTG

InCDS
NMD
Overlapping
sORF

3T3, E14, MEF,
NSC, v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

135764

GTG...

VVS...

GTG

Alternative
InCDS
Overlapping
sORF
NMD

Brain, R1E, MEF,
Neutrophil, v6-5, B_cell,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

130045

GTG...

VMD...

GTG

InCDS
Overlapping
sORF
NMD

E14, MEF, Neutrophil,
NSC, v6-5, Brain,
R1E, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	moderate	5	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

748932

138

CTG...

LLL...

CTG

Alternative
InCDS
Overlapping
sORF
NMD

Brain, B_cell, 3T3,
E14, NSC, v6-5,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1551227	ENSMUST00000196695	Fubp1-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
816748	ENSMUST00000199918	Fubp1-216	protein_coding	Ribo-seq		1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	weak	4	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse

141136

ATG...

MDL...

ATG

InCDS
Overlapping
sORF
NMD

Brain, R1E, E14,
MEF, Neutrophil, NSC,
v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	strong	5	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

508203

135

TTG...

LGC...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, Brain,
E14, NSC, Spleen_B_cell,
MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
544059	ENSMUST00000196739	Fubp1-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
816748	ENSMUST00000199918	Fubp1-216	protein_coding	Ribo-seq		2	sORFs_org_Mouse
508204	ENSMUST00000198405	Fubp1-210	protein_coding	Ribo-seq		3	sORFs_org_Mouse
53988	ENSMUST00000200056	Fubp1-217	protein_coding	Ribo-seq		2	sORFs_org_Mouse

820991

201

ATG...

MGL...

ATG

Downstream
Overlapping
sORF

B_cell, E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1221136

147

AAG...

KQF...

AAG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse

747568

ATG...

MGL...

ATG

Alternative
InCDS
Overlapping
sORF
NMD

R1E, MEF, NSC,
v6-5, 3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		4	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

747455

GTG...

VLI...

GTG

Alternative
InCDS
Overlapping
sORF
NMD

MEF, NSC, v6-5,
B_cell, 3T3, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		3	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

540277

GTG...

VDS...

GTG

Alternative
InCDS
Overlapping
sORF
NMD

E14, MEF, v6-5,
3T3, Brain, B_cell,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
1551227	ENSMUST00000196695	Fubp1-205	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

502857

ATG...

MTM...

ATG

Alternative
InCDS
NMD
Overlapping
sORF

B_cell, E14, MEF,
NSC, v6-5, Glioma,
Liver, MESC, 3T3,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
53190	ENSMUST00000196062	Fubp1-203	nonsense_mediated_decay	Ribo-seq	weak	5	sORFs_org_Mouse
1551227	ENSMUST00000196695	Fubp1-205	protein_coding	Ribo-seq	weak	1	Johnstone2016
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1223424

174

AGG...

RSS...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

540165

TTG...

LKR...

TTG

InCDS
Overlapping
sORF
NMD

R1E, E14, MEF,
Neutrophil, NSC, v6-5,
3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	weak	5	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

136376

CTG...

LEY...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

3T3, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

138237

129

CTG...

LAI...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

B_cell, MEF, 3T3,
E14, Neutrophil, NSC,
v6-5, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	strong	6	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse

1222347

183

ATC...

IQT...

ATC

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse

748309

ATG...

MVM...

ATG

InCDS
Overlapping
sORF
NMD

E14, MEF, NSC,
v6-5, Glioma, Liver,
MESC, R1E, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse
1551227	ENSMUST00000196695	Fubp1-205	protein_coding	Ribo-seq	strong	1	Johnstone2016
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

752427

177

TTG...

LDQ...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

B_cell, Brain, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

820938

219

ATG...

MGF...

ATG

Downstream
Overlapping
sORF

B_cell, E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		3	sORFs_org_Mouse

53140

ATG...

MVV...

ATG

Alternative
sORF
Upstream

B_cell, Brain, Spleen_B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse

134957

105

CTG...

LVV...

CTG

Alternative
InCDS
Overlapping
sORF
NMD

MEF, B_cell, Brain,
R1E, E14, NSC,
v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	strong	5	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

818459

ATG...

MRI...

ATG

sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
816748	ENSMUST00000199918	Fubp1-216	protein_coding	Ribo-seq		1	sORFs_org_Mouse

536145

ATG...

MGK...

ATG

InCDS
Overlapping
sORF
NMD

R1E, 3T3, E14,
MEF, NSC, Glioma,
Liver, MESC, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse
1551227	ENSMUST00000196695	Fubp1-205	protein_coding	Ribo-seq	strong	1	Johnstone2016
816748	ENSMUST00000199918	Fubp1-216	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

542307

CTG...

LIN...

CTG

Alternative
InCDS
Overlapping
sORF

E14, MEF, NSC,
v6-5, R1E, 3T3,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		5	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

535640

102

TTG...

LGC...

TTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

3T3, E14, MEF,
NSC, v6-5, Brain,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	strong	5	sORFs_org_Mouse
1551227	ENSMUST00000196695	Fubp1-205	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
819294	ENSMUST00000197141	Fubp1-207	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

972740

102

ATT...

IIV...

ATT

sORF
Alternative
InCDS
Overlapping

BMDC, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
53988	ENSMUST00000200056	Fubp1-217	protein_coding	Ribo-seq		1	sORFs_org_Mouse
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse

540199

GTG...

VAY...

GTG

InCDS
NMD
Overlapping
sORF
Downstream

3T3, B_cell, E14,
MEF, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
53190	ENSMUST00000196062	Fubp1-203	nonsense_mediated_decay	Ribo-seq	strong	6	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

536707

102

GTG...

VVE...

GTG

Alternative
InCDS
NMD
Overlapping
sORF

3T3, R1E, MEF,
Neutrophil, v6-5, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse

144167

TTG...

LGR...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, R1E,
B_cell, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
816748	ENSMUST00000199918	Fubp1-216	protein_coding	Ribo-seq		1	sORFs_org_Mouse
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse

820232

153

ATG...

MLT...

ATG

Intronic
sORF
Alternative
InCDS
Overlapping
NMD

B_cell, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
819294	ENSMUST00000197141	Fubp1-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

747793

129

CTG...

LGP...

CTG

sORF
Alternative
InCDS
Overlapping
NMD

B_cell, R1E, 3T3,
E14, NSC, v6-5,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
816748	ENSMUST00000199918	Fubp1-216	protein_coding	Ribo-seq		1	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	moderate	4	sORFs_org_Mouse
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1551227	ENSMUST00000196695	Fubp1-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse

750403

GTG...

VSA...

GTG

Alternative
InCDS
NMD
Overlapping
sORF

3T3, Brain, R1E,
B_cell, E14, MEF,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1551227	ENSMUST00000196695	Fubp1-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1553208

126

CTG...

LAQ...

CTG

Downstream
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

131229

117

GTG...

VDR...

GTG

Alternative
InCDS
Overlapping
sORF
NMD

E14, MEF, Neutrophil,
NSC, v6-5, B_cell,
3T3, Brain, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	moderate	6	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

537541

TTG...

LQQ...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

B_cell, MEF, NSC,
R1E, v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
53190	ENSMUST00000196062	Fubp1-203	nonsense_mediated_decay	Ribo-seq	moderate	5	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

143346

123

CTG...

LEH...

CTG

InCDS
Overlapping
sORF

Brain, R1E, Spleen_B_cell,
3T3, B_cell, MEF,
E14, NSC, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		5	sORFs_org_Mouse

127253

GTG...

VNR...

GTG

InCDS
Overlapping
sORF
Intronic
NMD
Downstream

MEF, BMDC, 3T3,
B_cell, E14, Neutrophil,
NSC, R1E, v6-5,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
1463887	ENSMUST00000199199	Fubp1-213	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
53190	ENSMUST00000196062	Fubp1-203	nonsense_mediated_decay	Ribo-seq	moderate	8	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

751585

CTG...

LIN...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

3T3, B_cell, Neutrophil,
v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

750018

GTG...

VQP...

GTG

Alternative
InCDS
NMD
Overlapping
sORF

3T3, E14, NSC,
v6-5, Brain, R1E,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	moderate	4	sORFs_org_Mouse
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1551227	ENSMUST00000196695	Fubp1-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
816748	ENSMUST00000199918	Fubp1-216	protein_coding	Ribo-seq		1	sORFs_org_Mouse

972508

138

ACG...

TAA...

ACG

sORF
Alternative
Overlapping
Upstream

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1219396	ENSMUST00000199202	Fubp1-214	protein_coding	Ribo-seq		1	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

892983

AAG...

KQR...

AAG

Alternative
InCDS
Overlapping
sORF

E14, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse
53988	ENSMUST00000200056	Fubp1-217	protein_coding	Ribo-seq		1	sORFs_org_Mouse

542811

108

CTG...

LSN...

CTG

InCDS
Overlapping
sORF

3T3, B_cell, E14,
MEF, NSC, v6-5,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		5	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1221868

AGG...

RSR...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

543673

TTG...

LER...

TTG

InCDS
Overlapping
sORF

3T3, B_cell, MEF,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse

52287

GTG...

VQE...

GTG

Alternative
sORF
Upstream

Spleen_B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

1224347

ATA...

ILQ...

ATA

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse

539759

138

CTG...

LQR...

CTG

InCDS
NMD
Overlapping
sORF
Intronic

3T3, B_cell, R1E,
Brain, Liver, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
819959	ENSMUST00000199127	Fubp1-212	retained_intron	Ribo-seq		2	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse

141434

138

GTG...

VFR...

GTG

Alternative
InCDS
Overlapping
sORF

E14, MEF, Neutrophil,
NSC, v6-5, Brain,
R1E, 3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		6	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

543748

GTG...

VLI...

GTG

Alternative
InCDS
Overlapping
sORF

E14, MEF, NSC,
v6-5, 3T3, B_cell,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		4	sORFs_org_Mouse
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1220685

126

AGG...

RSR...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

747870

132

CTG...

LLG...

CTG

sORF
Alternative
InCDS
Overlapping
NMD

B_cell, R1E, Brain,
3T3, E14, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
816748	ENSMUST00000199918	Fubp1-216	protein_coding	Ribo-seq		1	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1551227	ENSMUST00000196695	Fubp1-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	weak	4	sORFs_org_Mouse

54385

ATG...

MPR...

ATG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

BMDC, E14, NSC,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1463349	ENSMUST00000200207	Fubp1-218	retained_intron	Ribo-seq		1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	moderate	2	sORFs_org_Mouse
53988	ENSMUST00000200056	Fubp1-217	protein_coding	Ribo-seq		1	sORFs_org_Mouse

129443

120

CTG...

LVD...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

B_cell, MEF, Brain,
R1E, NSC, v6-5,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

820726

228

ATG...

MGP...

ATG

Downstream
Overlapping
sORF

B_cell, E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1220823

126

ATC...

ISR...

ATC

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse

506774

ATG...

MVM...

ATG

Alternative
InCDS
Overlapping
sORF
NMD

Spleen_B_cell, 3T3, B_cell,
E14, MEF, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
53190	ENSMUST00000196062	Fubp1-203	nonsense_mediated_decay	Ribo-seq	strong	5	sORFs_org_Mouse

1374815

TTG...

LQI...

TTG

Alternative
Downstream
NMD
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
53190	ENSMUST00000196062	Fubp1-203	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

544112

ATG...

MGL...

ATG

Alternative
InCDS
Overlapping
sORF

R1E, E14, MEF,
NSC, v6-5, Glioma,
Liver, MESC, 3T3,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		5	sORFs_org_Mouse
1551227	ENSMUST00000196695	Fubp1-205	protein_coding	Ribo-seq		1	Johnstone2016
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse

820305

162

CTG...

LLI...

CTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

E14, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
819294	ENSMUST00000197141	Fubp1-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

893280

AGG...

RED...

AGG

InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

1682608

GTG...

VPT...

GTG

InCDS
NMD
Overlapping
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

820240

TTG...

LFS...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

B_cell, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

504749

CTG...

LAR...

CTG

Alternative
InCDS
Overlapping
sORF
NMD

Brain, 3T3, B_cell,
E14, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1551227	ENSMUST00000196695	Fubp1-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
53190	ENSMUST00000196062	Fubp1-203	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse

820722

237

CTG...

LYP...

CTG

Downstream
Overlapping
sORF

B_cell, E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		3	sORFs_org_Mouse

543577

114

CTG...

LAR...

CTG

Alternative
InCDS
Overlapping
sORF

NSC, v6-5, 3T3,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		2	sORFs_org_Mouse
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

129965

TTG...

LAE...

TTG

InCDS
Overlapping
sORF
Downstream
NMD

MEF, Brain, B_cell,
E14, Neutrophil, NSC,
R1E, v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
53190	ENSMUST00000196062	Fubp1-203	nonsense_mediated_decay	Ribo-seq	moderate	8	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

537009

TTG...

LLK...

TTG

InCDS
Overlapping
sORF
NMD

R1E, 3T3, E14,
MEF, NSC, v6-5,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

542831

TTG...

LEH...

TTG

InCDS
Overlapping
sORF

E14, MEF, NSC,
3T3, B_cell, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		3	sORFs_org_Mouse
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1222779

AGG...

RSL...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

752559

GTG...

VVA...

GTG

InCDS
NMD
Overlapping
sORF
Downstream

3T3, B_cell, E14,
MEF, NSC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse
53190	ENSMUST00000196062	Fubp1-203	nonsense_mediated_decay	Ribo-seq	strong	6	sORFs_org_Mouse
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

895515

123

ATT...

IIV...

ATT

sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
53988	ENSMUST00000200056	Fubp1-217	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1221024

AAG...

KHK...

AAG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

816821

GTG...

VRN...

GTG

InCDS
NMD
Overlapping
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1172278

ATG...

MLR...

ATG

Alternative
Downstream
NMD
sORF

E14, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
53190	ENSMUST00000196062	Fubp1-203	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

895885

AAG...

KQR...

AAG

sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
53988	ENSMUST00000200056	Fubp1-217	protein_coding	Ribo-seq		1	sORFs_org_Mouse

53189

TTG...

LNS...

TTG

CDS
NMD
sORF
InCDS
Overlapping

B_cell, E14, MEF,
Neutrophil, NSC, R1E,
Testis, v6-5, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
53190	ENSMUST00000196062	Fubp1-203	nonsense_mediated_decay	Ribo-seq	weak	9	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

747350

150

TTG...

LFL...

TTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

3T3, E14, MEF,
NSC, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse
819294	ENSMUST00000197141	Fubp1-207	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse

506198

CTG...

LAA...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

3T3, Brain, B_cell,
E14, v6-5, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1551227	ENSMUST00000196695	Fubp1-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
53190	ENSMUST00000196062	Fubp1-203	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse

893894

AAG...

KCG...

AAG

Alternative
InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1221019

ATA...

IWG...

ATA

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1374547

198

GTG...

VRF...

GTG

Alternative
InCDS
NMD
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1219796

120

AGG...

RLQ...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse

817266

138

ATG...

MLR...

ATG

InCDS
NMD
Overlapping
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

896098

174

ACG...

TAA...

ACG

Alternative
Overlapping
sORF
Upstream

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

542145

105

CTG...

LAA...

CTG

Alternative
InCDS
Overlapping
sORF

E14, MEF, NSC,
v6-5, 3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		4	sORFs_org_Mouse
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

144505

114

CTG...

LNL...

CTG

InCDS
Overlapping
sORF

E14, MEF, NSC,
v6-5, Brain, R1E,
3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		5	sORFs_org_Mouse
127254	ENSMUST00000106121	Fubp1-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
52288	ENSMUST00000166984	Fubp1-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

750693

111

TTG...

LLT...

TTG

InCDS
NMD
Overlapping
sORF

B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1221530

AGG...

RTS...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1219905

195

AGG...

RQE...

AGG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse

893085

132

AGG...

RHN...

AGG

sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
53988	ENSMUST00000200056	Fubp1-217	protein_coding	Ribo-seq		1	sORFs_org_Mouse

817929

ATG...

MML...

ATG

InCDS
NMD
Overlapping
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1219265

ATT...

ISL...

ATT

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1224395

150

CTG...

LHL...

CTG

Downstream
Overlapping
sORF

Brain, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1506193

TTG...

LFV...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1220805

ATA...

IDS...

ATA

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
502858	ENSMUST00000200524	Fubp1-220	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1224282

138

ATC...

IQD...

ATC

Downstream
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1222585

165

CTG...

LYP...

CTG

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq		1	sORFs_org_Mouse

751448

156

CTG...

LKV...

CTG

Alternative
InCDS
NMD
Overlapping
sORF

3T3, E14, NSC,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
535641	ENSMUST00000199876	Fubp1-215	nonsense_mediated_decay	Ribo-seq		4	sORFs_org_Mouse

1217971

AAG...

KNR...

AAG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
543321	ENSMUST00000198227	Fubp1-209	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

1683644

TTG...

LLN...

TTG

Downstream
NMD
sORF

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
816822	ENSMUST00000200452	Fubp1-219	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

816950

ATG...

MLP...

ATG

sORF
Alternative
InCDS
Overlapping

B_cell, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
816748	ENSMUST00000199918	Fubp1-216	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1551227	ENSMUST00000196695	Fubp1-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse

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