Gene NCBI:26987 | MetamORF

Gene

ID CARD

NCBI:26987

Aliases

2700069E09Rik
AI036339, AV129531, D0H0S6743E
Eif4e2, Eif4el3, ENSMUSG00000026254
MGI:1914440, NCBI:26987, OFF:Eif4e2

Chromosome

Transcripts

47 ORFs
8 known transcripts
163 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

853895

ENSMUST00000113232

Eif4e2-205

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
415903	246	AAG ...	KMV ...	Ribo-seq	AAG		1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF
390832	135	TTG ...	LSL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Liver
150477	183	TTG ...	LSL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	v6-5
307777	129	CTG ...	LDQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Liver
1144713	105	CTG ...	LLG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
455473	102	CTG ...	LGE ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
54653	201	GTG ...	VAR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Liver, v6-5
48465	243	ATG ...	MVR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Liver
465044	141	GTG ...	VDH ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF, v6-5
120731	117	CTG ...	LAV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	v6-5
154042	186	CTG ...	LLS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	v6-5
47181	240	GTG ...	VRR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Liver
149908	177	CTG ...	LDQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	v6-5
670799	48	TTG ...	LGR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	v6-5
389437	138	CTG ...	LLS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Liver
50196	267	ATG ...	MKK ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Liver
126881	90	ATG ...	MSR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	v6-5
1223094	264	AAG ...	KKT ...	Ribo-seq	AAG		1	sORFs_org_Mouse	InCDS Overlapping sORF	MEF

112368

ENSMUST00000113235

Eif4e2-207

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
642397	51	ATG ...	MQI ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Neutrophil
400016	54	CTG ...	LEV ...	Ribo-seq	CTG	strong	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, R1E
465044	141	GTG ...	VDH ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, MEF
390832	135	TTG ...	LSL ...	Ribo-seq	TTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain
149908	177	CTG ...	LDQ ...	Ribo-seq	CTG		6	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14, MEF, Neutrophil
670799	48	TTG ...	LGR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
126881	90	ATG ...	MSR ...	Ribo-seq	ATG		7	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14, MEF, Neutrophil, NSC
665898	48	GTG ...	VTF ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, R1E
40488	33	ATG ...	MGP ...	Ribo-seq	ATG	strong	4	sORFs_org_Mouse	sORF Upstream	3T3, BMDC, MEF, R1E
389437	138	CTG ...	LLS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain
244814	69	CTG ...	LAV ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14
307777	129	CTG ...	LDQ ...	Ribo-seq	CTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14
154042	186	CTG ...	LLS ...	Ribo-seq	CTG		6	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14, MEF, Neutrophil
537402	138	CTG ...	LPA ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, R1E
47181	240	GTG ...	VRR ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14
732007	99	GTG ...	VTF ...	Ribo-seq	GTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, MEF, R1E
1227342	144	ATA ...	IRL ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
1194185	45	CTG ...	LRG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
150477	183	TTG ...	LSL ...	Ribo-seq	TTG		6	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14, MEF, Neutrophil
50196	267	ATG ...	MKK ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14
1144713	105	CTG ...	LLG ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF
681470	39	ATG ...	MGA ...	Ribo-seq	ATG	strong	3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Neutrophil, R1E
48465	243	ATG ...	MVR ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14
970463	90	ATC ...	ISS ...	Ribo-seq	ATC		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
352539	51	TTG ...	LVL ...	Ribo-seq	TTG	moderate	4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, E14, R1E
54653	201	GTG ...	VAR ...	Ribo-seq	GTG		6	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14, MEF, Neutrophil
735836	210	TTG ...	LGR ...	Ribo-seq	TTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, E14, R1E
455473	102	CTG ...	LGE ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14, MEF
328825	42	ATG ...	MSR ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14
120731	117	CTG ...	LAV ...	Ribo-seq	CTG		7	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain, E14, MEF, Neutrophil, NSC
716275	54	ATG ...	MMQ ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Neutrophil

292790

ENSMUST00000113230

Eif4e2-203

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
40488	33	ATG ...	MGP ...	Ribo-seq	ATG		2	sORFs_org_Mouse	Alternative sORF Upstream	Brain, Spleen_B_cell
455473	102	CTG ...	LGE ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
469221	114	CTG ...	LNA ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	sORF Upstream	Spleen_B_cell
150477	183	TTG ...	LSL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
484589	36	CTG ...	LQA ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	sORF Upstream	Spleen_B_cell
50196	267	ATG ...	MKK ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
527346	78	CTG ...	LGR ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	sORF Upstream	Spleen_B_cell
390832	135	TTG ...	LSL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
48465	243	ATG ...	MVR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
154042	186	CTG ...	LLS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
389437	138	CTG ...	LLS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
307777	129	CTG ...	LDQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
485720	84	TTG ...	LSS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	Spleen_B_cell
352539	51	TTG ...	LVL ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
120731	117	CTG ...	LAV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
465044	141	GTG ...	VDH ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
47181	240	GTG ...	VRR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
54653	201	GTG ...	VAR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell
149908	177	CTG ...	LDQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Spleen_B_cell

40489

ENSMUST00000050876

Eif4e2-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
120731	117	CTG ...	LAV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, MEF
150477	183	TTG ...	LSL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
670799	48	TTG ...	LGR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
642397	51	ATG ...	MQI ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
126881	90	ATG ...	MSR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, MEF
149908	177	CTG ...	LDQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
154042	186	CTG ...	LLS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
390832	135	TTG ...	LSL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
48465	243	ATG ...	MVR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Testis
716275	54	ATG ...	MMQ ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
54653	201	GTG ...	VAR ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, MEF, Testis
681470	39	ATG ...	MGA ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
400016	54	CTG ...	LEV ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
328825	42	ATG ...	MSR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
40488	33	ATG ...	MGP ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	sORF Upstream	Testis
47181	240	GTG ...	VRR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Testis
307777	129	CTG ...	LDQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
244814	69	CTG ...	LAV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain
50196	267	ATG ...	MKK ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	Brain, Testis
389437	138	CTG ...	LLS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Brain

991399

ENSMUST00000113231

Eif4e2-204

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
126881	90	ATG ...	MSR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
485720	84	TTG ...	LSS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF
54653	201	GTG ...	VAR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
328825	42	ATG ...	MSR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
716275	54	ATG ...	MMQ ...	Ribo-seq	ATG	moderate	1	Johnstone2016	Alternative InCDS Overlapping sORF	Glioma, Liver, MEF, MESC
484589	36	CTG ...	LQA ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	sORF Upstream	Liver
1048886	39	TTG ...	LGS ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF
681470	39	ATG ...	MGA ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
389437	138	CTG ...	LLS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
47181	240	GTG ...	VRR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
50196	267	ATG ...	MKK ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
1717672	183	GTG ...	VFP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative Overlapping sORF Upstream	MEF
48465	243	ATG ...	MVR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF

756426

ENSMUST00000076362

Eif4e2-202

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
48465	243	ATG ...	MVR ...	Ribo-seq	ATG		3	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC, E14
154042	186	CTG ...	LLS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC
40488	33	ATG ...	MGP ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	sORF Upstream	B_cell
149908	177	CTG ...	LDQ ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC
328825	42	ATG ...	MSR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC
120731	117	CTG ...	LAV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC
389437	138	CTG ...	LLS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC
1223094	264	AAG ...	KKT ...	Ribo-seq	AAG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
54653	201	GTG ...	VAR ...	Ribo-seq	GTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC, E14
400016	54	CTG ...	LEV ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
1217209	234	AGG ...	RKK ...	Ribo-seq	AGG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
126881	90	ATG ...	MSR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC
1302948	291	AAG ...	KKT ...	Ribo-seq	AAG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
1223975	189	AGG ...	RLL ...	Ribo-seq	AGG		1	sORFs_org_Mouse	InCDS Overlapping sORF	E14
642397	51	ATG ...	MQI ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
670799	48	TTG ...	LGR ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
681470	39	ATG ...	MGA ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
390832	135	TTG ...	LSL ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC, E14
150477	183	TTG ...	LSL ...	Ribo-seq	TTG		3	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC, E14
716275	54	ATG ...	MMQ ...	Ribo-seq	ATG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
1194185	45	CTG ...	LRG ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
47181	240	GTG ...	VRR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC
307777	129	CTG ...	LDQ ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC
732007	99	GTG ...	VTF ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
665898	48	GTG ...	VTF ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
50196	267	ATG ...	MKK ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC
352539	51	TTG ...	LVL ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	B_cell
1287842	189	ATA ...	IRL ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14
244814	69	CTG ...	LAV ...	Ribo-seq	CTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	B_cell, BMDC
1285812	66	ATT ...	IHG ...	Ribo-seq	ATT		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	E14

935181

ENSMUST00000123735

Eif4e2-208

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
390832	135	TTG ...	LSL ...	Ribo-seq	TTG		5	sORFs_org_Mouse	sORF	E14, MEF, Neutrophil, v6-5
389437	138	CTG ...	LLS ...	Ribo-seq	CTG		5	sORFs_org_Mouse	sORF	E14, MEF, Neutrophil, v6-5
1048886	39	TTG ...	LGS ...	Ribo-seq	TTG		2	sORFs_org_Mouse	sORF	MEF, Neutrophil
50196	267	ATG ...	MKK ...	Ribo-seq	ATG		3	sORFs_org_Mouse	sORF	BMDC, MEF, Neutrophil
935180	39	ATC ...	ISS ...	Ribo-seq	ATC		1	sORFs_org_Mouse	sORF	BMDC
665898	48	GTG ...	VTF ...	Ribo-seq	GTG		3	sORFs_org_Mouse	sORF	BMDC, MEF, v6-5
485720	84	TTG ...	LSS ...	Ribo-seq	TTG		3	sORFs_org_Mouse	sORF	MEF, v6-5
48465	243	ATG ...	MVR ...	Ribo-seq	ATG		2	sORFs_org_Mouse	sORF	MEF, Neutrophil
415903	246	AAG ...	KMV ...	Ribo-seq	AAG		1	sORFs_org_Mouse	sORF	BMDC
328825	42	ATG ...	MSR ...	Ribo-seq	ATG		5	sORFs_org_Mouse	sORF	MEF, Neutrophil, v6-5
47181	240	GTG ...	VRR ...	Ribo-seq	GTG		2	sORFs_org_Mouse	sORF	MEF, Neutrophil
307777	129	CTG ...	LDQ ...	Ribo-seq	CTG		4	sORFs_org_Mouse	sORF	MEF, Neutrophil, v6-5
244814	69	CTG ...	LAV ...	Ribo-seq	CTG		4	sORFs_org_Mouse	sORF	MEF, Neutrophil, v6-5

415649

ENSMUST00000113233

Eif4e2-206

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
418293	294	ATG ...	MKK ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	C2C12
244814	69	CTG ...	LAV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
47181	240	GTG ...	VRR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
149908	177	CTG ...	LDQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
1849693	60	CTG ...	LEA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Downstream Overlapping sORF	R1E
415903	246	AAG ...	KMV ...	Ribo-seq	AAG		1	sORFs_org_Mouse	InCDS Overlapping sORF	C2C12
352539	51	TTG ...	LVL ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Liver
40488	33	ATG ...	MGP ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	sORF Upstream	Liver
48465	243	ATG ...	MVR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
120731	117	CTG ...	LAV ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
154042	186	CTG ...	LLS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
390832	135	TTG ...	LSL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
328825	42	ATG ...	MSR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
54653	201	GTG ...	VAR ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
307777	129	CTG ...	LDQ ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
150477	183	TTG ...	LSL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
50196	267	ATG ...	MKK ...	Ribo-seq	ATG		2	sORFs_org_Mouse	InCDS Overlapping sORF	C2C12, R1E
126881	90	ATG ...	MSR ...	Ribo-seq	ATG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E
389437	138	CTG ...	LLS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	R1E

ORFs

47 ORFs
8 known transcripts
163 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

415903

246

AAG...

KMV...

AAG

InCDS
Overlapping
sORF

MEF, C2C12, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
935181	ENSMUST00000123735	Eif4e2-208	protein_coding	Ribo-seq		1	sORFs_org_Mouse

642397

ATG...

MQI...

ATG

Alternative
InCDS
Overlapping
sORF

3T3, Neutrophil, MEF,
E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

400016

CTG...

LEV...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, E14,
R1E, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

40488

ATG...

MGP...

ATG

Alternative
sORF
Upstream

Brain, Spleen_B_cell, B_cell,
3T3, BMDC, MEF,
R1E, Liver, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq		2	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq	strong	4	sORFs_org_Mouse
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

120731

117

CTG...

LAV...

CTG

InCDS
Overlapping
sORF
Alternative

Brain, MEF, B_cell,
BMDC, R1E, Spleen_B_cell,
v6-5, 3T3, E14,
Neutrophil, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		7	sORFs_org_Mouse

465044

141

GTG...

VDH...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, E14, MEF,
v6-5, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

126881

ATG...

MSR...

ATG

Alternative
InCDS
Overlapping
sORF

MEF, 3T3, Brain,
E14, Neutrophil, NSC,
B_cell, BMDC, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
991399	ENSMUST00000113231	Eif4e2-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		7	sORFs_org_Mouse
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse

485720

TTG...

LSS...

TTG

Alternative
Overlapping
sORF
Upstream

MEF, Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
991399	ENSMUST00000113231	Eif4e2-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
935181	ENSMUST00000123735	Eif4e2-208	protein_coding	Ribo-seq		3	sORFs_org_Mouse

390832

135

TTG...

LSL...

TTG

InCDS
Overlapping
sORF
Alternative

3T3, Brain, Liver,
E14, MEF, Neutrophil,
v6-5, Spleen_B_cell, B_cell,
BMDC, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
935181	ENSMUST00000123735	Eif4e2-208	protein_coding	Ribo-seq		5	sORFs_org_Mouse
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

48465

243

ATG...

MVR...

ATG

InCDS
Overlapping
sORF
Alternative

B_cell, BMDC, E14,
Brain, Testis, R1E,
Spleen_B_cell, MEF, Neutrophil,
Liver, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
935181	ENSMUST00000123735	Eif4e2-208	protein_coding	Ribo-seq		2	sORFs_org_Mouse
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
991399	ENSMUST00000113231	Eif4e2-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

154042

186

CTG...

LLS...

CTG

InCDS
Overlapping
sORF
Alternative

B_cell, BMDC, Brain,
3T3, E14, MEF,
Neutrophil, Spleen_B_cell, R1E,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		6	sORFs_org_Mouse
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse

150477

183

TTG...

LSL...

TTG

InCDS
Overlapping
sORF
Alternative

Brain, v6-5, Spleen_B_cell,
B_cell, BMDC, E14,
3T3, MEF, Neutrophil,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		6	sORFs_org_Mouse
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

670799

TTG...

LGR...

TTG

Alternative
InCDS
Overlapping
sORF

MEF, 3T3, E14,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse

149908

177

CTG...

LDQ...

CTG

InCDS
Overlapping
sORF
Alternative

B_cell, BMDC, 3T3,
Brain, E14, MEF,
Neutrophil, R1E, v6-5,
Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		6	sORFs_org_Mouse
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse

54653

201

GTG...

VAR...

GTG

Alternative
InCDS
Overlapping
sORF

MEF, B_cell, BMDC,
E14, Brain, Testis,
Liver, v6-5, R1E,
Spleen_B_cell, 3T3, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
991399	ENSMUST00000113231	Eif4e2-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		3	sORFs_org_Mouse
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		2	sORFs_org_Mouse
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		6	sORFs_org_Mouse

328825

ATG...

MSR...

ATG

InCDS
Overlapping
sORF
Alternative

B_cell, BMDC, MEF,
Brain, R1E, Neutrophil,
v6-5, 3T3, E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
991399	ENSMUST00000113231	Eif4e2-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
935181	ENSMUST00000123735	Eif4e2-208	protein_coding	Ribo-seq		5	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse

418293

294

ATG...

MKK...

ATG

InCDS
Overlapping
sORF

C2C12

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

307777

129

CTG...

LDQ...

CTG

InCDS
Overlapping
sORF
Alternative

Liver, 3T3, Brain,
E14, Spleen_B_cell, B_cell,
BMDC, MEF, Neutrophil,
v6-5, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
935181	ENSMUST00000123735	Eif4e2-208	protein_coding	Ribo-seq		4	sORFs_org_Mouse
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1144713

105

CTG...

LLG...

CTG

Alternative
InCDS
Overlapping
sORF

v6-5, E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse

244814

CTG...

LAV...

CTG

InCDS
Overlapping
sORF

R1E, 3T3, Brain,
E14, MEF, Neutrophil,
v6-5, B_cell, BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
935181	ENSMUST00000123735	Eif4e2-208	protein_coding	Ribo-seq		4	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse

455473

102

CTG...

LGE...

CTG

InCDS
Overlapping
sORF
Alternative

Spleen_B_cell, v6-5, E14,
MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse

665898

GTG...

VTF...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, R1E, BMDC,
MEF, v6-5, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse
935181	ENSMUST00000123735	Eif4e2-208	protein_coding	Ribo-seq		3	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

47181

240

GTG...

VRR...

GTG

InCDS
Overlapping
sORF
Alternative

R1E, 3T3, Brain,
E14, Testis, B_cell,
BMDC, Liver, MEF,
Neutrophil, Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
935181	ENSMUST00000123735	Eif4e2-208	protein_coding	Ribo-seq		2	sORFs_org_Mouse
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
991399	ENSMUST00000113231	Eif4e2-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

469221

114

CTG...

LNA...

CTG

sORF
Upstream

Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

389437

138

CTG...

LLS...

CTG

InCDS
Overlapping
sORF
Alternative

B_cell, BMDC, E14,
MEF, Neutrophil, v6-5,
3T3, Brain, Spleen_B_cell,
Liver, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
935181	ENSMUST00000123735	Eif4e2-208	protein_coding	Ribo-seq		5	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		2	sORFs_org_Mouse
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
991399	ENSMUST00000113231	Eif4e2-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq		1	sORFs_org_Mouse
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1223094

264

AAG...

KKT...

AAG

InCDS
Overlapping
sORF

E14, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1849693

CTG...

LEA...

CTG

Alternative
Downstream
Overlapping
sORF

R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

484589

CTG...

LQA...

CTG

sORF
Upstream

Spleen_B_cell, Liver

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse
991399	ENSMUST00000113231	Eif4e2-204	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

50196

267

ATG...

MKK...

ATG

Alternative
InCDS
Overlapping
sORF

Spleen_B_cell, BMDC, MEF,
Neutrophil, 3T3, Brain,
E14, B_cell, C2C12,
R1E, Liver, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq		1	sORFs_org_Mouse
935181	ENSMUST00000123735	Eif4e2-208	protein_coding	Ribo-seq		3	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		2	sORFs_org_Mouse
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq		2	sORFs_org_Mouse
991399	ENSMUST00000113231	Eif4e2-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
853895	ENSMUST00000113232	Eif4e2-205	protein_coding	Ribo-seq		1	sORFs_org_Mouse
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

527346

CTG...

LGR...

CTG

sORF
Upstream

Spleen_B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse

352539

TTG...

LVL...

TTG

Alternative
InCDS
Overlapping
sORF

Liver, Spleen_B_cell, 3T3,
Brain, E14, R1E,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
415649	ENSMUST00000113233	Eif4e2-206	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
292790	ENSMUST00000113230	Eif4e2-203	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq	moderate	4	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

1217209

234

AGG...

RKK...

AGG

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

716275

ATG...

MMQ...

ATG

Alternative
InCDS
Overlapping
sORF

MEF, Glioma, Liver,
MESC, B_cell, 3T3,
Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
991399	ENSMUST00000113231	Eif4e2-204	protein_coding	Ribo-seq	moderate	1	Johnstone2016
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

1048886

TTG...

LGS...

TTG

sORF
Alternative
Overlapping
Upstream

MEF, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
935181	ENSMUST00000123735	Eif4e2-208	protein_coding	Ribo-seq		2	sORFs_org_Mouse
991399	ENSMUST00000113231	Eif4e2-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

537402

138

CTG...

LPA...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, E14, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1302948

291

AAG...

KKT...

AAG

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

935180

ATC...

ISS...

ATC

sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
935181	ENSMUST00000123735	Eif4e2-208	protein_coding	Ribo-seq		1	sORFs_org_Mouse

732007

GTG...

VTF...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, MEF,
R1E, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		4	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

681470

ATG...

MGA...

ATG

Alternative
InCDS
Overlapping
sORF

MEF, B_cell, 3T3,
Neutrophil, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
40489	ENSMUST00000050876	Eif4e2-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
991399	ENSMUST00000113231	Eif4e2-204	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq	strong	3	sORFs_org_Mouse

1227342

144

ATA...

IRL...

ATA

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1223975

189

AGG...

RLL...

AGG

InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1194185

CTG...

LRG...

CTG

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

970463

ATC...

ISS...

ATC

Alternative
InCDS
Overlapping
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		1	sORFs_org_Mouse

735836

210

TTG...

LGR...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, E14, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
112368	ENSMUST00000113235	Eif4e2-207	protein_coding	Ribo-seq		3	sORFs_org_Mouse

1287842

189

ATA...

IRL...

ATA

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1717672

183

GTG...

VFP...

GTG

Alternative
Overlapping
sORF
Upstream

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
991399	ENSMUST00000113231	Eif4e2-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1285812

ATT...

IHG...

ATT

Alternative
InCDS
Overlapping
sORF

E14

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
756426	ENSMUST00000076362	Eif4e2-202	protein_coding	Ribo-seq		1	sORFs_org_Mouse

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