Gene NCBI:266781 | MetamORF

Gene

ID CARD

NCBI:266781

Aliases

5830447M19Rik
AI790646, b2b1625.1Clo, D5Ertd260e
ENSMUSG00000029146, MGI:2387801, mKIAA0064
NCBI:266781, OFF:Snx17, Snx17

Chromosome

Transcripts

63 ORFs
10 known transcripts
134 ORF to known transcript associations

MetamORF
transcript ID

The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.

Transcript ID

The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).

Transcript name

The transcript name (e.g. MDK-202).

Transcript biotype

The biotype of the transcript (as defined by Ensembl).

ORFs

Display all the transcripts related to the entry.

564726

ENSMUST00000200730

Snx17-202

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
172310	81	TTG ...	LTP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Neutrophil
65276	99	GTG ...	VSL ...	Ribo-seq	GTG	moderate	4	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14, MEF, Neutrophil, NSC
560228	30	CTG ...	LQS ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF, NSC
62999	69	GTG ...	VGG ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14, MEF, Neutrophil
565916	36	CTG ...	LWL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
64897	57	CTG ...	LRR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14, MEF
1020503	123	TTG ...	LEV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Downstream NMD sORF	Neutrophil
568941	84	TTG ...	LSM ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
61783	132	GTG ...	VPL ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Downstream NMD sORF	E14, Neutrophil
568044	78	ATG ...	MAG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
566117	42	CTG ...	LPM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
63429	30	ATG ...	MAS ...	Ribo-seq	ATG	strong	7	sORFs_org_Mouse	Alternative NMD sORF Upstream	E14, MEF, Neutrophil, NSC, v6-5
1511536	33	TTG ...	LPC ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	NSC
520862	51	TTG ...	LGA ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF, NSC
61512	108	CTG ...	LSA ...	Ribo-seq	CTG	moderate	5	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14, MEF, Neutrophil, NSC, v6-5
1019130	117	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Downstream NMD sORF	Neutrophil
1018204	144	GTG ...	VPT ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Downstream NMD sORF	MEF, Neutrophil
62396	93	TTG ...	LRG ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14, MEF, NSC
175162	90	CTG ...	LFS ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Neutrophil, v6-5
175535	51	ATG ...	MGP ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3, E14
65355	81	CTG ...	LRR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Alternative Downstream NMD sORF	E14, Neutrophil
1019650	114	CTG ...	LLS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Downstream NMD sORF	Neutrophil
567815	42	GTG ...	VRL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
1061579	156	GTG ...	VSD ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Neutrophil
175035	33	CTG ...	LHS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3
62673	69	CTG ...	LAF ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Downstream NMD sORF	E14, MEF, Neutrophil
518333	117	GTG ...	VVP ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	3T3, Neutrophil, v6-5
61485	75	CTG ...	LEL ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Downstream NMD sORF	E14, MEF, Neutrophil
1660091	63	CTG ...	LGC ...	Ribo-seq	CTG	strong	1	sORFs_org_Mouse	Alternative NMD sORF Upstream	MEF
568529	36	ATG ...	MTT ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF
1511902	81	TTG ...	LTP ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative Downstream NMD sORF	MEF, NSC
63894	78	CTG ...	LQS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Neutrophil

1431337

ENSMUST00000202318

Snx17-209

retained_intron

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF
length

The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Identification

The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.

Start codon

The start codon sequence of the ORF.

Kozak context

The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.

Exp. count

The number of original datasets that identifed the ORF on the transcript.

Data sources

The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.

ORF annotations

A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of the cell types in which the ORF has already been identified on the transcript.

1020503

123

TTG ...

LEV ...

Ribo-seq

TTG

sORFs_org_Mouse

Liver

1019650

114

CTG ...

LLS ...

Ribo-seq

CTG

sORFs_org_Mouse

Liver

61486

ENSMUST00000202032

Snx17-207

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
560228	30	CTG ...	LQS ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
566117	42	CTG ...	LPM ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
568941	84	TTG ...	LSM ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
61485	75	CTG ...	LEL ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Testis
180080	66	ATG ...	MES ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	3T3
175162	90	CTG ...	LFS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Brain
568529	36	ATG ...	MTT ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Intronic sORF	3T3
172310	81	TTG ...	LTP ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
518333	117	GTG ...	VVP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
830634	159	GTG ...	VLC ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
565916	36	CTG ...	LWL ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, B_cell
175035	33	CTG ...	LHS ...	Ribo-seq	CTG	weak	2	sORFs_org_Mouse	Intronic sORF	B_cell, Brain
61512	108	CTG ...	LSA ...	Ribo-seq	CTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Testis
567815	42	GTG ...	VRL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	3T3
64541	72	GTG ...	VGA ...	Ribo-seq	GTG	moderate	2	sORFs_org_Mouse	Intronic sORF	3T3, Testis
64897	57	CTG ...	LRR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Testis
63894	78	CTG ...	LQS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Testis
901917	30	ATA ...	IAF ...	Ribo-seq	ATA		1	sORFs_org_Mouse	Intronic sORF	BMDC
62396	93	TTG ...	LRG ...	Ribo-seq	TTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Testis
830200	144	TTG ...	LYL ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
62673	69	CTG ...	LAF ...	Ribo-seq	CTG		3	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Testis
62575	30	GTG ...	VKS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Testis
65276	99	GTG ...	VSL ...	Ribo-seq	GTG	moderate	3	sORFs_org_Mouse	Intronic sORF	3T3, B_cell, Testis
830290	30	CTG ...	LTR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	B_cell
568861	39	GTG ...	VRF ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	3T3
175535	51	ATG ...	MGP ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Intronic sORF	B_cell
62999	69	GTG ...	VGG ...	Ribo-seq	GTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Testis
520862	51	TTG ...	LGA ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	3T3
568044	78	ATG ...	MAG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Intronic sORF	B_cell
65355	81	CTG ...	LRR ...	Ribo-seq	CTG		2	sORFs_org_Mouse	Intronic sORF	3T3, Testis
61783	132	GTG ...	VPL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Testis

1018205

ENSMUST00000202124

Snx17-208

nonsense_mediated_decay

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
172310	81	TTG ...	LTP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain
1020503	123	TTG ...	LEV ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Downstream NMD Overlapping sORF	Brain
566117	42	CTG ...	LPM ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain
1019130	117	GTG ...	VLL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Downstream NMD Overlapping sORF	Brain
61783	132	GTG ...	VPL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Downstream NMD sORF	Brain
62396	93	TTG ...	LRG ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain
1019664	45	TTG ...	LEK ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain
64897	57	CTG ...	LRR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain
175035	33	CTG ...	LHS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	MEF
1020588	66	GTG ...	VEQ ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain
61512	108	CTG ...	LSA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain
65355	81	CTG ...	LRR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain
62999	69	GTG ...	VGG ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain
1019650	114	CTG ...	LLS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Downstream NMD Overlapping sORF	Brain
65276	99	GTG ...	VSL ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain
61485	75	CTG ...	LEL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Downstream NMD sORF	Brain
1018204	144	GTG ...	VPT ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Downstream NMD Overlapping sORF	Brain
518333	117	GTG ...	VVP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain
62673	69	CTG ...	LAF ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Downstream NMD sORF	Brain
568529	36	ATG ...	MTT ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative Downstream NMD sORF	Brain
175162	90	CTG ...	LFS ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS NMD Overlapping sORF	Brain

62038

ENSMUST00000031029

Snx17-201

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
190579	102	CTG ...	LLP ...	Ribo-seq	CTG		9	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, MEF, R1E, Spleen_B_cell, v6-5
567815	42	GTG ...	VRL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
573931	123	GTG ...	VLP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
574612	66	CTG ...	LKR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3
180080	66	ATG ...	MES ...	Ribo-seq	ATG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
188221	63	CTG ...	LTR ...	Ribo-seq	CTG		5	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, MEF, Neutrophil
62236	99	ATG ...	MPR ...	Ribo-seq	ATG	moderate	2	sORFs_org_Mouse	Alternative sORF Upstream	B_cell, Testis
62947	87	CTG ...	LLA ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
190236	120	ATG ...	MES ...	Ribo-seq	ATG		3	sORFs_org_Mouse Johnstone2016	Alternative InCDS Overlapping sORF	3T3, Brain, Glioma, Liver, MEF, MESC
560228	30	CTG ...	LQS ...	Ribo-seq	CTG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
189639	171	ATG ...	MAG ...	Ribo-seq	ATG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, R1E
522374	99	GTG ...	VSS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	Spleen_B_cell
63429	30	ATG ...	MAS ...	Ribo-seq	ATG	strong	5	sORFs_org_Mouse Johnstone2016	Alternative sORF Upstream	BMDC, Glioma, Liver, MEF, MESC, Testis
571125	138	GTG ...	VKA ...	Ribo-seq	GTG		1	sORFs_org_Mouse	InCDS Overlapping sORF	3T3
566117	42	CTG ...	LPM ...	Ribo-seq	CTG	moderate	2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC, MEF
62037	90	TTG ...	LLL ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Alternative sORF Upstream	Testis
830290	30	CTG ...	LTR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
186225	120	TTG ...	LGA ...	Ribo-seq	TTG		2	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain
175535	51	ATG ...	MGP ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	Brain
189153	111	GTG ...	VRL ...	Ribo-seq	GTG		3	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, Brain, MEF
574311	180	GTG ...	VSS ...	Ribo-seq	GTG		2	sORFs_org_Mouse	InCDS Overlapping sORF	3T3, Brain
190313	108	ATG ...	MFL ...	Ribo-seq	ATG		10	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, E14, MEF, R1E, Spleen_B_cell, v6-5
190461	69	TTG ...	LCS ...	Ribo-seq	TTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, MEF, R1E
190001	177	TTG ...	LSM ...	Ribo-seq	TTG		4	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, B_cell, Brain, R1E
565916	36	CTG ...	LWL ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	MEF
189293	141	TTG ...	LYG ...	Ribo-seq	TTG		7	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, MEF, v6-5
568529	36	ATG ...	MTT ...	Ribo-seq	ATG	weak	1	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	BMDC
189210	120	TTG ...	LNC ...	Ribo-seq	TTG		8	sORFs_org_Mouse	Alternative InCDS Overlapping sORF	3T3, BMDC, Brain, MEF, R1E, v6-5

1558263

ENSMUST00000202743

Snx17-211

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
1511902	81	TTG ...	LTP ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Brain
567815	42	GTG ...	VRL ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain
520862	51	TTG ...	LGA ...	Ribo-seq	TTG		1	sORFs_org_Mouse	Intronic sORF	Brain

1019736

ENSMUST00000201679

Snx17-205

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
63429	30	ATG ...	MAS ...	Ribo-seq	ATG	strong	2	sORFs_org_Mouse	sORF	Brain, Liver

518334

ENSMUST00000201535

Snx17-204

protein_coding

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
180080	66	ATG ...	MES ...	Ribo-seq	ATG		1	sORFs_org_Mouse	sORF	Spleen_B_cell
518333	117	GTG ...	VVP ...	Ribo-seq	GTG		1	sORFs_org_Mouse	sORF	Spleen_B_cell
188221	63	CTG ...	LTR ...	Ribo-seq	CTG		1	sORFs_org_Mouse	sORF	B_cell
63429	30	ATG ...	MAS ...	Ribo-seq	ATG		3	sORFs_org_Mouse	sORF	B_cell, E14, MEF
520862	51	TTG ...	LGA ...	Ribo-seq	TTG		1	sORFs_org_Mouse	sORF	Spleen_B_cell

1432214

ENSMUST00000202323

Snx17-210

retained_intron

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
62396	93	TTG ...	LRG ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
1559708	51	TTG ...	LMP ...	Ribo-seq	TTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
61485	75	CTG ...	LEL ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Liver
522374	99	GTG ...	VSS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	Intronic sORF	Brain
62673	69	CTG ...	LAF ...	Ribo-seq	CTG		1	sORFs_org_Mouse	Intronic sORF	Liver
65276	99	GTG ...	VSL ...	Ribo-seq	GTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
61512	108	CTG ...	LSA ...	Ribo-seq	CTG	moderate	1	sORFs_org_Mouse	Intronic sORF	Brain
1558368	66	ATG ...	MAI ...	Ribo-seq	ATG	strong	1	sORFs_org_Mouse	Intronic sORF	Brain

566473

ENSMUST00000201343

Snx17-203

processed_transcript

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
522374	99	GTG ...	VSS ...	Ribo-seq	GTG		1	sORFs_org_Mouse	ncRNA sORF	3T3
568044	78	ATG ...	MAG ...	Ribo-seq	ATG		1	sORFs_org_Mouse	ncRNA sORF	3T3
568941	84	TTG ...	LSM ...	Ribo-seq	TTG		1	sORFs_org_Mouse	ncRNA sORF	3T3

2986351

UNKNOWN_TRANSCRIPT

MetamORF ORF ID The MetamORF ID of the ORF. This is an unique ID referring to the ORF.	ORF length The genomic length of the ORF (in bp). This length is defined as the sum of the lengths of each exon constituting the ORF (thus excluding its eventual introns) and includes both the start and the stop codons.	Nucleic sequence The nucleic sequence of the ORF.	Amino acid sequence The amino acid sequence of the ORF.	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Start codon The start codon sequence of the ORF.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.	ORF annotations A comma-separated list of the annotations computed by our algorithm for the ORF on the transcript. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.	Cell types A comma-separated list of the cell types in which the ORF has already been identified on the transcript.
190236	120	ATG ...	MES ...	Predicted	ATG		1	Samandi2017	sORF

ORFs

63 ORFs
10 known transcripts
134 ORF to known transcript associations

MetamORF
ORF ID

The MetamORF ID of the ORF. This is an unique ID referring to the ORF.

ORF Length

Nucleic
sequence

The nucleic sequence of the ORF.

Amino acid
sequence

The amino acid sequence of the ORF.

Start codon

The start codon sequence of the ORF.

ORF annotations

A comma-separated list of all the annotations computed by our algorithm for the ORF. This list includes the annotations computed for the ORF for all transcripts. See the section dedicated to ORF annotations in the advanced documentation for more details regarding the nomenclature we use.

Cell types

A comma-separated list of all the cell types in which the ORF has already been identified.

Transcripts

Display all the transcripts related to the entry.

172310

TTG...

LTP...

TTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

Neutrophil, Brain, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		2	sORFs_org_Mouse

65276

GTG...

VSL...

GTG

Alternative
Downstream
NMD
sORF
Intronic

E14, MEF, Neutrophil,
NSC, Brain, 3T3,
B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq	moderate	4	sORFs_org_Mouse
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
1432214	ENSMUST00000202323	Snx17-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

1020503

123

TTG...

LEV...

TTG

Intronic
sORF
Downstream
NMD
Overlapping

Liver, Brain, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1431337	ENSMUST00000202318	Snx17-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

560228

CTG...

LQS...

CTG

Intronic
sORF
Alternative
Downstream
NMD
InCDS
Overlapping

3T3, B_cell, MEF,
NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq	weak	2	sORFs_org_Mouse
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

566117

CTG...

LPM...

CTG

Alternative
Downstream
NMD
sORF
Intronic
InCDS
Overlapping

Brain, 3T3, MEF,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

190579

102

CTG...

LLP...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, Brain,
MEF, R1E, Spleen_B_cell,
v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		9	sORFs_org_Mouse

62999

GTG...

VGG...

GTG

Alternative
Downstream
NMD
sORF
Intronic

E14, MEF, Neutrophil,
Brain, 3T3, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		2	sORFs_org_Mouse

565916

CTG...

LWL...

CTG

Alternative
Downstream
NMD
sORF
Intronic
InCDS
Overlapping

MEF, 3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

64897

CTG...

LRR...

CTG

Alternative
Downstream
NMD
sORF
Intronic

E14, MEF, Brain,
3T3, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		2	sORFs_org_Mouse

567815

GTG...

VRL...

GTG

Alternative
InCDS
Overlapping
sORF
Intronic
Downstream
NMD

MEF, 3T3, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1558263	ENSMUST00000202743	Snx17-211	retained_intron	Ribo-seq		1	sORFs_org_Mouse

568941

TTG...

LSM...

TTG

Alternative
Downstream
NMD
sORF
Intronic
ncRNA

MEF, B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse
566473	ENSMUST00000201343	Snx17-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse

61783

132

GTG...

VPL...

GTG

Downstream
NMD
sORF
Intronic

E14, Neutrophil, Brain,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1511902

TTG...

LTP...

TTG

Intronic
sORF
Alternative
Downstream
NMD

Brain, MEF, NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1558263	ENSMUST00000202743	Snx17-211	retained_intron	Ribo-seq		1	sORFs_org_Mouse
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse

63429

ATG...

MAS...

ATG

sORF
Alternative
NMD
Upstream

Brain, Liver, E14,
MEF, Neutrophil, NSC,
v6-5, BMDC, Glioma,
MESC, Testis, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1019736	ENSMUST00000201679	Snx17-205	protein_coding	Ribo-seq	strong	2	sORFs_org_Mouse
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq	strong	7	sORFs_org_Mouse
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq	strong	5	sORFs_org_Mouse Johnstone2016
518334	ENSMUST00000201535	Snx17-204	protein_coding	Ribo-seq		3	sORFs_org_Mouse

568044

ATG...

MAG...

ATG

Alternative
Downstream
NMD
sORF
ncRNA
Intronic

MEF, 3T3, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
566473	ENSMUST00000201343	Snx17-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

573931

123

GTG...

VLP...

GTG

InCDS
Overlapping
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

1019130

117

GTG...

VLL...

GTG

Downstream
NMD
Overlapping
sORF

Brain, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

574612

CTG...

LKR...

CTG

Alternative
InCDS
Overlapping
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

180080

ATG...

MES...

ATG

Alternative
InCDS
Overlapping
sORF
Intronic

Brain, Spleen_B_cell, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
518334	ENSMUST00000201535	Snx17-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

62396

TTG...

LRG...

TTG

Alternative
Downstream
NMD
sORF
Intronic

Brain, E14, MEF,
NSC, 3T3, B_cell,
Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
1432214	ENSMUST00000202323	Snx17-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq	moderate	3	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse

518333

117

GTG...

VVP...

GTG

sORF
Intronic
Alternative
InCDS
NMD
Overlapping

Spleen_B_cell, B_cell, 3T3,
Neutrophil, v6-5, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
518334	ENSMUST00000201535	Snx17-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

188221

CTG...

LTR...

CTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, MEF,
Neutrophil, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		5	sORFs_org_Mouse
518334	ENSMUST00000201535	Snx17-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse

61485

CTG...

LEL...

CTG

Intronic
sORF
Downstream
NMD

B_cell, Testis, Liver,
E14, MEF, Neutrophil,
Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		2	sORFs_org_Mouse
1432214	ENSMUST00000202323	Snx17-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1511536

TTG...

LPC...

TTG

Alternative
Downstream
NMD
sORF

NSC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse

1019650

114

CTG...

LLS...

CTG

Intronic
sORF
Downstream
NMD
Overlapping

Liver, Neutrophil, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1431337	ENSMUST00000202318	Snx17-209	retained_intron	Ribo-seq		1	sORFs_org_Mouse
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

1019664

TTG...

LEK...

TTG

Alternative
InCDS
NMD
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

520862

TTG...

LGA...

TTG

Alternative
Downstream
NMD
sORF
Intronic

MEF, NSC, Spleen_B_cell,
Brain, 3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
518334	ENSMUST00000201535	Snx17-204	protein_coding	Ribo-seq		1	sORFs_org_Mouse
1558263	ENSMUST00000202743	Snx17-211	retained_intron	Ribo-seq		1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

61512

108

CTG...

LSA...

CTG

Alternative
Downstream
NMD
sORF
Intronic

E14, MEF, Neutrophil,
NSC, v6-5, Brain,
3T3, B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq	moderate	5	sORFs_org_Mouse
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq	moderate	1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq	moderate	3	sORFs_org_Mouse
1432214	ENSMUST00000202323	Snx17-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

1559708

TTG...

LMP...

TTG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1432214	ENSMUST00000202323	Snx17-210	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

175162

CTG...

LFS...

CTG

Intronic
sORF
Alternative
InCDS
NMD
Overlapping

Brain, Neutrophil, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

568529

ATG...

MTT...

ATG

Intronic
sORF
Alternative
Downstream
NMD
InCDS
Overlapping

3T3, MEF, Brain,
BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq	weak	1	sORFs_org_Mouse
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

62236

ATG...

MPR...

ATG

Alternative
sORF
Upstream

B_cell, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq	moderate	2	sORFs_org_Mouse

1018204

144

GTG...

VPT...

GTG

Downstream
NMD
sORF
Overlapping

MEF, Neutrophil, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

175035

CTG...

LHS...

CTG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

MEF, B_cell, Brain,
3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq	weak	2	sORFs_org_Mouse
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq	weak	1	sORFs_org_Mouse

62947

CTG...

LLA...

CTG

Alternative
sORF
Upstream

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq	weak	1	sORFs_org_Mouse

190236

120

ATG...

MES...

ATG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, Glioma,
Liver, MEF, MESC,

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse Johnstone2016
2986351	UNKNOWN_TRANSCRIPT			Predicted		1	Samandi2017

175535

ATG...

MGP...

ATG

Alternative
InCDS
NMD
Overlapping
sORF
Intronic

3T3, E14, Brain,
B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq	strong	2	sORFs_org_Mouse
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq	strong	1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

1020588

GTG...

VEQ...

GTG

Alternative
InCDS
NMD
Overlapping
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

830634

159

GTG...

VLC...

GTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

189639

171

ATG...

MAG...

ATG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, Brain,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

65355

CTG...

LRR...

CTG

Alternative
Downstream
NMD
sORF
Intronic

E14, Neutrophil, Brain,
3T3, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		2	sORFs_org_Mouse
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		2	sORFs_org_Mouse

522374

GTG...

VSS...

GTG

InCDS
Overlapping
sORF
ncRNA
Intronic

Spleen_B_cell, 3T3, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
566473	ENSMUST00000201343	Snx17-203	processed_transcript	Ribo-seq		1	sORFs_org_Mouse
1432214	ENSMUST00000202323	Snx17-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse

1061579

156

GTG...

VSD...

GTG

Alternative
Downstream
NMD
sORF

Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

64541

GTG...

VGA...

GTG

Intronic
sORF

3T3, Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq	moderate	2	sORFs_org_Mouse

571125

138

GTG...

VKA...

GTG

InCDS
Overlapping
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse

63894

CTG...

LQS...

CTG

Intronic
sORF
Alternative
Downstream
NMD

Testis, Neutrophil

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

901917

ATA...

IAF...

ATA

Intronic
sORF

BMDC

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

62037

TTG...

LLL...

TTG

Alternative
sORF
Upstream

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq	moderate	1	sORFs_org_Mouse

830200

144

TTG...

LYL...

TTG

Intronic
sORF

B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

830290

CTG...

LTR...

CTG

Alternative
InCDS
Overlapping
sORF
Intronic

MEF, B_cell

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		1	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

62673

CTG...

LAF...

CTG

Downstream
NMD
sORF
Intronic

E14, MEF, Neutrophil,
3T3, B_cell, Testis,
Liver, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq		3	sORFs_org_Mouse
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		3	sORFs_org_Mouse
1432214	ENSMUST00000202323	Snx17-210	retained_intron	Ribo-seq		1	sORFs_org_Mouse
1018205	ENSMUST00000202124	Snx17-208	nonsense_mediated_decay	Ribo-seq		1	sORFs_org_Mouse

186225

120

TTG...

LGA...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

1660091

CTG...

LGC...

CTG

Alternative
NMD
sORF
Upstream

MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
564726	ENSMUST00000200730	Snx17-202	nonsense_mediated_decay	Ribo-seq	strong	1	sORFs_org_Mouse

189153

111

GTG...

VRL...

GTG

Alternative
InCDS
Overlapping
sORF

3T3, Brain, MEF

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		3	sORFs_org_Mouse

574311

180

GTG...

VSS...

GTG

InCDS
Overlapping
sORF

3T3, Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		2	sORFs_org_Mouse

62575

GTG...

VKS...

GTG

Intronic
sORF

Testis

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq		1	sORFs_org_Mouse

190313

108

ATG...

MFL...

ATG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, Brain,
E14, MEF, R1E,
Spleen_B_cell, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		10	sORFs_org_Mouse

190461

TTG...

LCS...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, Brain,
MEF, R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		8	sORFs_org_Mouse

190001

177

TTG...

LSM...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, B_cell, Brain,
R1E

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		4	sORFs_org_Mouse

568861

GTG...

VRF...

GTG

Intronic
sORF

3T3

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
61486	ENSMUST00000202032	Snx17-207	retained_intron	Ribo-seq	moderate	1	sORFs_org_Mouse

189293

141

TTG...

LYG...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, Brain,
MEF, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		7	sORFs_org_Mouse

1558368

ATG...

MAI...

ATG

Intronic
sORF

Brain

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
1432214	ENSMUST00000202323	Snx17-210	retained_intron	Ribo-seq	strong	1	sORFs_org_Mouse

189210

120

TTG...

LNC...

TTG

Alternative
InCDS
Overlapping
sORF

3T3, BMDC, Brain,
MEF, R1E, v6-5

MetamORF transcript ID The MetamORF ID of the transcript. This is an arbitrary ID that does not correspond to any official (Ensembl, NCBI...) transcript ID or external reference.	Transcript ID The official transcript ID (usually an Ensembl ID, e.g. ENST00000395565).	Transcript name The transcript name (e.g. MDK-202).	Transcript biotype The biotype of the transcript (as defined by Ensembl).	Identification The method of identification used to identify the ORF. MetamORF currently integrates data from three main type of identification methods: bioinformatic predictions, ribosome profiling experiments and mass spectrometry experiments (either proteomics or proteogenomics). See the data sources section of the advances documentation for more information about this.	Kozak context The Kozak context computed by our algorithm for the ORF on the transcript. See the Kozak contexts section of the advanced documentation for more details regarding the nomenclature we use.	Exp. count The number of original datasets that identifed the ORF on the transcript.	Data sources The data sources in which the ORF has been identified. Click on the button to display all the original IDs in a pop-up. See the data sources section of the advanced documentation for more details regarding the information related to the data sources and the original ORF IDs.
62038	ENSMUST00000031029	Snx17-201	protein_coding	Ribo-seq		8	sORFs_org_Mouse

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